Scomber japonicus (chub mackerel): 128362243
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Entry
128362243 CDS
T09718
Name
(RefSeq) LOW QUALITY PROTEIN: 5-hydroxytryptamine receptor 3A-like
KO
K04819
5-hydroxytryptamine receptor 3
Organism
sjo
Scomber japonicus (chub mackerel)
Pathway
sjo04082
Neuroactive ligand signaling
Brite
KEGG Orthology (KO) [BR:
sjo00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04082 Neuroactive ligand signaling
128362243
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
sjo04040
]
128362243
Ion channels [BR:
sjo04040
]
Ligand-gated channels
Serotonin (5-HT3)
128362243
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Motif
Pfam:
Neur_chan_LBD
Neur_chan_memb
Motif
Other DBs
NCBI-GeneID:
128362243
NCBI-ProteinID:
XP_053178960
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Position
7:complement(20281426..20285670)
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AA seq
503 aa
AA seq
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MTSKNTPLKLVLPSVKPILVVFLILIPAPCSAIMANCSQPNQLALLEALDPVLNLSAIRP
VMNLTTCTRVSTFFTLYGILGVVCSAQLALYSVPSKCRKSHXHCFSALLFIQDEKAQRLV
TYIWLEFWWRNEFIVWDPVQCGTGKISLPRDKFWVPDIVINEFIEKNAAPYVPYLYLYST
GVMHDSQPVKVVSSCNLDIYTFPFDIQNCTLTFNSYIHSAKDIKVLLGRSVARMTENSKK
IMTTMGEWELLDITAHNYSIPAQYEDSSIDQLSFHIRVRRRPTLYVLNLLIPSCFLITVD
LFSFLLPPQTVDRSSFKMTLILGYTVFLLIMNDLLPITGNTIPLINVFLSLCLALMVASL
LETIFITNLLCFSASASPVPHWIKVFVLQILGRLVFLTQKTKEQRDAELSTVTAETVEVV
EGPLEEKVPVVEDKTVVELRSLGRDLQAIRLQVEKQLNGSQTSEEWMQVGFIIDRLLFGI
YILFISVSFITIIIIWVNSYNKT
NT seq
1512 nt
NT seq
+upstream
nt +downstream
nt
atgacatccaagaatacaccactgaagttggtccttccatcagtcaagcctatactggtt
gtgtttctcattcttataccagctccatgcagtgccatcatggcaaattgttcccagcca
aatcaacttgctctattggaagctctggatccagtgttaaacctgagcgccatacgacct
gtcatgaacctcacaacctgcacccgcgtcagcacattcttcaccttatatggaatactt
ggagtggtatgttcagctcagttagcattatacagtgtaccgagtaagtgtagaaagagt
cactgacattgtttttctgctcttcttttcattcaggatgaaaaggctcaacgcttggtg
acttatatttggctagaattttggtggagaaatgagtttatcgtttgggatcctgtccag
tgcggcactggcaagatttctctccccagagacaagttttgggtgccagatattgtaatc
aatgaattcattgagaagaatgctgctccttatgtcccatatctatatctgtatagcact
ggggtcatgcacgattctcaaccagtcaaagttgtcagctcctgtaaccttgatatctac
accttccccttcgacatacagaactgcactcttactttcaactcctacatccactcagca
aaggacataaaggtattgttggggaggtctgtcgctagaatgacagaaaactccaagaag
atcatgaccactatgggggagtgggagctgctggatatcactgcccacaactacagcatt
cccgcacagtatgaggattcctccatcgatcagctttcatttcatatcagagtgaggcgt
cggcccaccctctatgtgctaaacctgcttatccctagttgcttcctcataacagtggat
ctcttcagcttcctgctacccccacagactgtggatcgatcctcctttaagatgaccctg
atcctgggctacaccgtcttcctactcatcatgaatgacctgctgccaatcacgggaaac
accatacctctcataaatgttttcctgtctttgtgcttggctctgatggtggccagtctg
ctggagactatcttcatcaccaacctgctgtgtttctctgcgagcgcctctcctgtgcct
cactggatcaaagtgttcgttctgcagattctgggccgtcttgttttcctgactcagaag
actaaagaacaaagagatgcagaactcagcactgtgacagcagagactgttgaagttgtt
gagggtcctctcgaggagaaggtgccagtggtggaggacaagactgtggtggagctgagg
agcctcggaagggatctccaggcgatccgcctgcaggtggagaagcagctgaatgggagc
cagacctcagaggaatggatgcaggtgggtttcatcatagaccgcctgctcttcggcatc
tacatcctctttatatcagtcagcttcattaccatcatcattatctgggtaaattcatat
aataaaacatga
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