Scomber japonicus (chub mackerel): 128362287
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Entry
128362287 CDS
T09718
Name
(RefSeq) threonine--tRNA ligase 1, cytoplasmic-like
KO
K01868
threonyl-tRNA synthetase [EC:
6.1.1.3
]
Organism
sjo
Scomber japonicus (chub mackerel)
Pathway
sjo00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
sjo00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
128362287
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
sjo01007
]
128362287
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
sjo03016
]
128362287
Enzymes [BR:
sjo01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.3 threonine---tRNA ligase
128362287
Amino acid related enzymes [BR:
sjo01007
]
Aminoacyl-tRNA synthetase
Class II (C/G)
128362287
Transfer RNA biogenesis [BR:
sjo03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Other AARSs
128362287
Prokaryotic type
128362287
BRITE hierarchy
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Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA-synt_2b
HGTP_anticodon
TGS
tRNA_SAD
Leu_zip
Motif
Other DBs
NCBI-GeneID:
128362287
NCBI-ProteinID:
XP_053179006
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Position
1:10933738..10943783
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AA seq
822 aa
AA seq
DB search
MAECLAARLAAQEEQIRLLAGEISSLRDGLSRGSLDAGGAAAVITPELETLKTENDKLKY
RLLHLRRGLQAELQLEEEAKKAKGGRQNGVKCGSAPEGNTSKQQQTNNRADKKVAAPATK
PGDKNKEKKQEKKQEKGQGAGGVKELKPLPGYIPERLSLYEELKKENDALLAKRATNSKP
ITVELPDGSKVAGKAWVTTPYQLACNISQGLADNAVISRVNGELWDLDRPLEQDCSLEIL
RFDNEDAQAVYWHSSAHILGEAMECFYGGCLCYGPPIENGFYYDMFLDGQKGVSSTEFGD
LETLCKNVVKEKQPFERLEVSKETLLKMFKYNKFKCRILNEKVTTPTTTVYRCGPLIDLC
RGPHVRHTGKIKAMKIYKNSSTYWEGRSDMETLQRIYGISFPDSKMLKEWERFQEEAKNR
DHRKIGKDQELFFFHDLSPGSCFFMPRGAYIYNTLTEFIRDEYWRRGFQEVASPNIYNSK
LWETSGHWQHYSENMFSFPVEDDIFALKPMNCPGHCLMFSHRPRSWRELPLRLADFGVLH
RNELSGTLTGLTRVRRFQQDDAHIFCTMDQIETEMKGCLDFLRCVYDVFGFSFQLHLSTR
PEKYLGDIAVWNQAEKQLENSLNEFGEPWKLNPGDGAFYGPKIDIKIKDAIGRYHQCATI
QLDFQLPIRFNLTFVGKDGDDKARPVIIHRAILGSVERMIAILTENYAGKWPLWISPRQV
MLVPVNPSCEEYAKRVCKQFTEAGIMADADLDSSCLLNKKIRNAQLAQYNFILVVGEKEK
MTNSVNVRTRDNKVHGELSVAEVLARLTLLKQSRCKNAEEEF
NT seq
2469 nt
NT seq
+upstream
nt +downstream
nt
atggcggaatgcctggctgcacgtttggcagctcaggaggagcaaatccgacttctcgcc
ggggagatctcttctcttcgagatggactaagccgaggtagtctggacgccggcggtgct
gctgctgtgatcaccccggagctggagaccctgaagacggagaatgacaagctcaagtac
cgcctgcttcacctccgccgtggtctccaggcagagctgcagctggaggaggaggcgaag
aaggcgaagggcgggagacagaatggagtcaagtgtggcagcgctccagagggcaacacc
agcaaacaacagcagacaaacaaccgagcggataaaaaggtggcagctcctgctactaaa
ccaggtgacaagaacaaggagaagaagcaggagaagaagcaggagaagggacaaggagct
ggtggtgtgaaagagctgaagcctttgcctggatacatcccagagcgcctcagcctctat
gaggagctgaagaaggagaatgacgccctcctggccaaaagagctacaaacagcaagccc
attactgtggagctgccagacggaagtaaggtggcaggcaaggcttgggtcaccacaccc
taccaactggcctgcaacatcagccaaggcctggctgacaatgcagtgatttctcgggtc
aatggggagctctgggatttggacagacctctcgagcaggactgctctcttgagatcttg
cgcttcgacaatgaagacgcccaggctgtgtactggcactccagtgctcacatcttaggg
gaagcaatggagtgcttttatggaggctgtttatgttatggacctcccatagagaatggc
ttctactacgacatgttcctggatggacaaaagggagtatccagcactgagttcggggac
ctggagactttgtgtaagaatgtggtgaaagaaaaacagccctttgagaggctggaggtc
agcaaggagacactgctgaagatgtttaagtacaacaaattcaagtgccgcattctgaat
gaaaaagtcaccacccccactactacagtctaccgatgcgggcccttgattgacctgtgc
agaggtccccatgtaagacacactggcaagatcaaggccatgaagatctacaagaactct
tccacttactgggagggccgctcggacatggaaacactacagaggatctacgggatttcc
ttccctgactcaaagatgctgaaagagtgggaacgtttccaggaggaggccaagaataga
gaccatcgtaaaattggaaaagaccaggagctgttcttcttccacgatctgagccccggc
agttgtttctttatgccgcggggagcctacatctacaacacactcactgagttcatcagg
gatgagtactggagaagaggttttcaggaagtagcctctcccaacatctataacagcaaa
ctgtgggagacatctggccactggcaacactacagcgaaaacatgttttctttccctgtg
gaggatgacatatttgcactcaagcccatgaactgccctggacactgtttgatgttcagc
caccggcctcgctcatggagggagcttcccttgcggttggcggatttcggggtcctccac
aggaatgagctttcaggaacgctgaccgggctgaccagagtgcgccgcttccaacaggat
gacgctcacattttctgcacgatggatcagatcgagacagaaatgaagggctgtcttgac
ttcctccgctgtgtttacgatgtgtttggcttctccttccagctccacctctccactcgc
ccagagaagtacctgggtgacatcgctgtgtggaaccaggctgagaagcaattggagaac
agcctgaatgagtttggggagccatggaaactcaaccctggagacggtgctttttacgga
cctaagatcgacatcaagatcaaagatgcaattggacgttaccaccagtgtgcaaccatt
cagctggacttccagctgccgatccgcttcaacctgacctttgtggggaaggatggggat
gacaaagcccggccagtaattatccatcgtgccatcttgggctcagttgagaggatgatt
gccattctcacagagaattacgcagggaaatggcctctgtggatctctccacgtcaagtg
atgttggtgcctgtcaacccctcctgtgaggaatatgccaagagggtttgtaagcagttt
actgaagctggtatcatggcagatgctgacctggactctagctgtcttctaaacaaaaaa
atccgcaacgctcagttggcccaatataacttcattctcgttgtcggagaaaaggagaag
atgactaacagcgtcaatgtgcgcacgagggacaacaaagtccacggagaactgtcggtg
gccgaggtgctggctcgcctgaccctgctcaaacagtcccgctgcaagaacgcagaggag
gagttctga
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