Scomber japonicus (chub mackerel): 128362360
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Entry
128362360 CDS
T09718
Name
(RefSeq) NLR family CARD domain-containing protein 3-like
KO
K22614
NLR family CARD domain-containing protein 3
Organism
sjo
Scomber japonicus (chub mackerel)
Brite
KEGG Orthology (KO) [BR:
sjo00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04054 Pattern recognition receptors [BR:
sjo04054
]
128362360
Pattern recognition receptors [BR:
sjo04054
]
Cytoplasmic pattern recognition receptors
NOD-like receptors
128362360
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
FISNA
NLRC4_HD2
NACHT
PRY
NOD2_WH
LRR_6
SPRY
AFG1_ATPase
Motif
Other DBs
NCBI-GeneID:
128362360
NCBI-ProteinID:
XP_053179075
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All DBs
Position
7:complement(35314605..35324720)
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AA seq
1050 aa
AA seq
DB search
MELPYKFKDGRHSDDHRQSSLSSVHTHTVRHIDTGSCPSSEVPSGQSAQQHQTHLDSIFM
LLEENIVTFVKNELKKMQKVLSPDYPGCLESQTEDEEVLDGEEKEQRRRSRDAFLKITLH
FLRRMKQEELADCLQSRTHAPECRRELKSNLHKKFQCLFEGIAKAGNPTLLNEIYTPLYI
TEGGTAEVNDEHEVRQIETASRKPDRPETTIRQEDFFKASPGRHEPIRTVMTKGVAGIGK
TVLTQKFTLDWAEDKANQDIHFTFPFTFRELNVLKKKKYSLVELVHHFFTETKEAGICRF
EEFQVVFIFDGLDECRLPLDFHNNEILTDVTESTSVDVLLTNVIRGKLLPSARLWITTRP
AAANQIPPECVGMVTEVRGFTDPQKEEYFRKRIRDEEQASTIISHIKTSRSLHIMCHIPV
FCWITATVLEDVLKSREGGELPKTLTEMYIHFLVVQSKLKKVKYDGGAETDPHWSPKSRK
MIESLGKLAFGQLQKGNLIFYESDLTECGIDIRAASVYSGVFTQVFKEERGLYQDKVFCF
VHLSLQEFLAALHVHLTFIKSGVNLLAGKPRKSQTNFYQRAVYEALKSPNGHLDLLLRFL
LGLSLPTNQTLLRGLLTQTGSSSQTNQETVQYIKKKLSENVSAERSINLFHCLNELNDRS
LVEKIQQSLRSGSLSTDKLSPAQWSALVFILLSSEKDLDVFDLKKYSASEEALLRLLPVV
KASNKALLSGCNLSERSCAALSSVLSSQSSSLRDLDLSHNNLQDSGVKQLSAGLESPHCG
LEALRLTDCNLSERSCAALSSVLSSQSSSLRDLDLSNNNLQDSGVKQLSAGLESPHCELK
TLSLQPAGVRWLTPGLRKYFCELTLDPNTANRKLKLSNNNRKVTHVEEDQSYPDHPDRFD
SYHQLLCRNDLTGRCYWEVEWRGYVSISVSYRRIRRKGNSDDCVFGRNDQSWSLRCSDFD
GFSVCHNKRGTSISSSSSSSSSSSSSSSSSSSSSVSNRVAVYVDCPARTLSFYRVSSDTL
IHLHTFNTTFTEPLYAGFWVWSGSVSLCGL
NT seq
3153 nt
NT seq
+upstream
nt +downstream
nt
atggagcttccttataagttcaaagatggacgccactctgatgatcacagacaaagttct
ctgagcagcgttcacactcatacagtcagacacattgatactgggagctgcccaagctca
gaggttcccagtggtcagtctgcccagcagcatcaaacacacctggactccatatttatg
ctgctggaggagaacatcgtcacttttgtgaagaacgaactgaagaagatgcagaaggtt
ctgagtccagattacccaggatgcttagagagtcagacggaggatgaggaggtgttggac
ggtgaggagaaagagcagaggaggagaagcagagatgcatttctgaagatcacactgcac
ttcctgaggagaatgaagcaggaggagctggctgactgtctgcagagcagaactcatgct
ccagagtgtcgacgtgaactaaagtctaacctgcacaagaagttccagtgtctgtttgag
gggatcgctaaagcaggaaacccaacccttctgaatgagatctacacaccgctctacatc
acagagggagggactgcagaggtcaatgatgaacatgaggtcagacagattgaaacagca
tccaggaaaccagacagaccagaaacaacaatcagacaagaagacttctttaaagcctca
cctggaagacatgaaccaatcagaacagtgatgacaaagggagtggctggcattgggaaa
acagtcttaacacagaagttcactctggactgggctgaagacaaagccaaccaggacata
cacttcacatttccattcactttcagagagctgaatgtgctgaaaaagaaaaagtacagc
ttggtggaacttgttcatcacttctttactgaaaccaaagaagcaggaatctgcaggttt
gaagagttccaggttgtgttcatctttgacggtctggatgagtgtcgacttcctctggac
ttccacaacaatgagatcctgactgatgttacagagtccacctcagtggatgtgctgctg
acaaacgtcatcagggggaaactgcttccttctgctcgcctctggataaccacacgacct
gcagcagccaatcagatccctcctgagtgtgtcggcatggtgacagaggtcagagggttc
actgacccacagaaggaggagtacttcaggaagagaatcagagatgaggagcaggccagc
accatcatctcccacatcaagacatcacgaagcctccacatcatgtgccacatcccagtc
ttctgctggatcactgctacagttctggaggatgtgttgaaaagcagagagggaggagag
ctgcccaagaccctgactgagatgtacatccacttcctggtggttcagtccaaactgaag
aaggtcaagtatgatggaggagctgagacagatccacactggagtccaaagagcaggaag
atgattgagtctctgggaaaactggcttttgggcagctgcagaaaggcaacctgatcttc
tatgaatcagacctgacagagtgtggcatcgatatcagagcagcctcagtgtactcagga
gtgttcacacaggtctttaaagaggagagagggctgtaccaggacaaggtgttctgcttc
gtccatctgagccttcaggagtttctggctgctcttcatgtccatctgacattcatcaag
tctggagtcaatctgctggcaggaaaaccaagaaaatcccagacaaatttctaccagaga
gctgtgtacgaggccttaaagagtccaaatggacacctggacttgctcctccgcttcctc
ctgggtctttcactgccgaccaatcagactctcctaagaggtctgctgacacagacagga
agtagctcacagaccaatcaggaaacagtccagtacatcaagaagaagctcagtgagaat
gtgtctgcagagagaagcatcaatctgttccactgtctgaatgaactgaatgatcgttct
ctagtggagaagatccaacagtccctgagatcaggaagtctctctacagataaactgtct
cctgctcagtggtcagctctagtcttcatcttactgtcatcagaaaaagatctggatgtg
tttgacctgaagaaatactctgcttcagaggaggctcttctgaggctgctgccagtggtc
aaagcctccaacaaagctctgttgagtggctgtaacctctcagagagaagctgtgcagct
ctgtcctcagttctcagctcccagtcctctagtctgagagatctggacctgagtcacaac
aacctgcaggattcaggagtgaagcagctttctgctggactggagagtccacactgtgga
ctggaagctctcaggctgactgactgtaatctctcagagagaagctgtgcagctctgtcc
tcagttctcagctcccagtcctctagtctgagagatctggacctgagtaacaacaacctg
caggattcaggagtgaagcagctttctgctggactggagagtccacactgtgaactgaag
actctcagcctgcagcctgctggagtccgatggttgacaccaggtctgaggaagtatttc
tgtgaactcacactggatccaaacacagcgaacagaaaactcaaactgtctaataacaac
aggaaggtgacacatgtggaggaggatcagtcatatcctgatcatccagacagatttgac
tcctatcatcagctgctgtgtagaaatgatctgactggtcgctgttactgggaggtcgag
tggagaggatacgtttctatatcagtgagttacagaagaatcagaaggaaaggaaacagt
gatgactgtgtgtttggaaggaacgatcagtcctggagtctgagatgctctgattttgat
ggtttctctgtctgtcacaataagagaggaacatccatctcctcctcctcctcctcctcc
tcctcctcctcctcctcctcctcctcctcctcctcctcctctgtctctaacagagtagca
gtgtatgtggactgtcctgctcgcactctgtccttctacagagtctcctctgacacactg
atccacctccacaccttcaacaccacattcactgaacctctgtatgctgggttctgggtc
tggtctggttcagtgtctctgtgtggtttgtag
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integrated database retrieval system
