Scomber japonicus (chub mackerel): 128362392
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Entry
128362392 CDS
T09718
Name
(RefSeq) LOW QUALITY PROTEIN: microtubule-associated protein 1B-like
KO
K10429
microtubule-associated protein 1
Organism
sjo
Scomber japonicus (chub mackerel)
Pathway
sjo03250
Viral life cycle - HIV-1
Brite
KEGG Orthology (KO) [BR:
sjo00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03250 Viral life cycle - HIV-1
128362392
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
sjo01009
]
128362392
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
sjo04812
]
128362392
Protein phosphatases and associated proteins [BR:
sjo01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
128362392
Cytoskeleton proteins [BR:
sjo04812
]
Eukaryotic cytoskeleton proteins
Microtubules
Tubulin-binding proteins
Microtubule-associated proteins (MAPs)
128362392
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MAPB1_N
Lactamase_B_2
Anti-Pycsar_Apyc1
Motif
Other DBs
NCBI-GeneID:
128362392
NCBI-ProteinID:
XP_053179108
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All DBs
Position
7:complement(35962670..35975949)
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AA seq
1323 aa
AA seq
DB search
MAAVTERGGGPGSSSSPGSPPGASRLPAPDYSVLVAVGSLRPHALLDRLLRQVDSGVRCW
SVDLDVSVLDQQLKLFVSRHSAFLSEDVPGQRTLQHSGDVLDTQVVVNPAHDFLCSEIRR
LLCESSRHKLLVLAGQCVEQSGDIVLQKGCFSFNDFIQIFTDEEVGELLSSADPAVKASL
TLSCPDYGPWKDSVLEKHNLQDFISIQINPPLVLPEMEGLQEFTEYLSESLEPESLFQLL
EPPSTVGFLKLSRPCCYIFPGGRGDSAFFAVNGFNVLVNGGSDLRSCFWKLVRHLDRIDS
VLLTHIGVDNLPGLNSLLLRKVAEQDEDTAGSHSEEDWMKNLISPEIGVVFLNVPDRVKS
IQGDPSQLRSVDQVALTLQHLQRLSIKPEPLSRPNGPSIEPAILFQKMGVGRLELYTLNP
VSGSKELEALMQVWPNSGSNLKGSDLPLTCLVSICALLVWHPSNPEEKIIRVLFPGCTPQ
HKILDGLEKLKHLDFLKVPVVCLRDLETPKTEKQPKRAESRESLKSQSKDFRPASALQKD
KLGRADVKKQEVKMKPKAAGDAAPKEKKDGDEKPKPKDADTKSKPPKAAEKLVPKKDPSK
EEKKEVKRKDEKVPAAAVKKEESGEKKKEVIKKEMLSSKPKKDIKPEPKSKRDVKPEDKK
TAKPVSKEVKKASSIGSTASSEHRKTGTLKKDGTLPKKDSLNKGTKTKPSLKEAERSKMS
TPEDMTAEFESLRLEDTNGNNGKNSKTSAVTSPAGAKANGNQKASTVESPEQFRSMETNA
SSPVAKTPKADLSVNFDLGTTATFQPLDGPDDVCLSSEEKTLELMSPADSAPNSAGHTPF
HHDDGSLEARRSSLGFEDYNQGGSCRTSDLSSLKEGLENSTSSQDKQSSLLTLSPFKDIM
PDSSPTVTSMPAEVGSPHSTEVDESLSVSLEQGLPPTAASPKALGDRLYSNGHFSDSDSN
TGMSLPLRSSLNGRCGNGSEEHIHGMSDVPHDVDLCLVSPCEFQHPKTPENQQQNPGLNN
NHSQDQSSSGCPSAYSQETPPTSVSDSFPTATDSDVPPGTEDCPSITADIDSDDDSSGFL
PPNPPLDHLSPPFPHRAASHDPPPAPVKDLPPLPPPHGACMADPEADAANKSTKSSAAKT
KKAAGPALKATGSSAAHNGKSKAGSSTLKTSSSHDVKPSARNSLGGSRTGPARPGSSASK
SAGSAGSEGSAVYVDLAYLPSGSASASLNLDFFKRLRSSYYIVSGEDPVKEEAMRRILDA
LLDGKNSWPDVQVTLIPTFDSLAMHDWYQETHDRQRELSITVLGSNSTVAMQEETFPACK
VEF
NT seq
3972 nt
NT seq
+upstream
nt +downstream
nt
atggcggcagtaacggagcggggcggaggtcccgggtcttcttcttctcccggttctcct
cccggtgcttcccggttaccggctccggactactcggtgctggtggcggtgggctcgctg
cggccgcacgcgctgctggaccggctgctgcggcaggtagactcaggtgtgcggtgctgg
tcggtggatctggacgtttctgttctggatcagcagctgaaactcttcgtatcgagacac
tcggccttcctgtcagaggacgtcccaggtcagaggacgctgcagcacagcggagacgtc
ctggacacgcaggtggttgtaaatcctgctcacgacttcctctgctccgagatccgccgg
ctgctctgcgagtcgtctcgacacaagctgctggttcttgccggtcagtgtgtcgagcag
agcggagacatcgtgctacagaaaggctgcttctccttcaacgacttcatccagatattt
actgatgaggaggttggggagttgttgagctcagcagacccggcggtgaaggccagtctg
accctcagctgtccggactacggtccctggaaggactctgtgttggagaagcacaacctg
caggacttcataagcatccagatcaaccctccgctggtcctcccagagatggagggtctg
caggagttcacggagtacctgtctgagtctctggagcccgagtctctcttccagctcctg
gagcctccgagcaccgtcggcttcctgaagctgtcccgtccctgctgctacatcttcccc
ggcgggaggggcgactcggccttctttgccgttaacggttttaacgtcctggtgaacggc
ggctccgaccttcgatcctgcttctggaaactggtccggcatctggacagaatcgactcg
gtgctgctgacccacatcggcgtagacaatctgcccggactgaacagcctgctgctgcgt
aaggtagcggagcaggacgaggacactgccggatctcactctgaagaggactggatgaaa
aacctcatctcccctgagatcggggtggttttcctaaacgtcccagacagagtgaagtcc
atccagggagatcccagccagctgcgaagtgtggaccaggtagcgctcactctgcagcac
ctgcaaagactctctattaaaccagaaccactcagccggcctaatggacccagtattgaa
ccggcgatcttgtttcagaagatgggagttggccgtctggagctgtacactctgaatccg
gtcagcggcagcaaggaactagaagctttgatgcaggtttggccaaacagcggatcaaac
ctcaagggctcagatcttcctctaacttgccttgtttccatttgtgctttgctggtctgg
catccgtccaaccccgaggagaagatcatccgcgttctcttccctggttgcacaccccag
cacaagattctggatggacttgaaaaactcaaacatctagatttcctcaaagttcccgtg
gtgtgtttgagggacctggaaactcccaaaactgaaaaacaaccaaaacgagcagagagt
cgagaaagccttaagtctcagtctaaggacttcagacccgctagtgccttacagaaagac
aaactaggacgagctgacgtcaaaaaacaggaagtgaaaatgaagccaaaggcagcagga
gacgctgctccgaaagagaagaaggacggggacgagaagccgaaaccgaaggacgcagat
acgaagtcaaagcctccaaaagctgctgagaagttggttccaaagaaagatccgtcaaaa
gaagagaaaaaggaagtgaaaagaaaggacgagaaagttcctgctgctgctgtgaagaag
gaagagagtggggagaagaagaaagaggttattaagaaggaaatgttaagttcaaagcca
aagaaagacattaaacctgaaccaaaaagcaagagggacgttaaaccggaggacaagaaa
acagcaaaaccagtcagtaaggaagtgaagaaagcgtcgagcatcggatcaacagcgagc
agcgagcaccgaaagactggaactctgaagaaagacgggactctcccaaagaaagactct
ttgaacaaagggacaaagaccaagccgagcctaaaggaggccgaacgctccaagatgtcg
acgcctgaagacatgacggctgagtttgaaagtcttcgattggaagacaccaacgggaac
aacggtaagaactcaaagacctcagcggtgactagtcctgccggagcgaaggccaacggg
aaccagaaggcctcgacggtagagagtccagagcagttccgctccatggagaccaacgcc
tcctcgcccgtcgctaagacacccaaagccgacctcagcgttaacttcgatctcggcacg
acggcgaccttccagccgctcgacggaccagatgacgtctgcttgagctcagaggaaaag
actctggagctgatgtctcctgcggattcagccccgaacagcgcggggcacacgccgttc
caccacgacgacggcagcctggaggcccggcgctccagtctgggcttcgaagactacaac
cagggagggtcgtgcaggacctcagacctgagctcgctgaaggaaggcctcgagaactcc
acgtcctctcaggataaacagtccagccttttgaccctcagtcctttcaaagacataatg
cccgactcgtctcccaccgtcacctccatgcccgccgaggtcggctcgcctcactccacc
gaagtcgatgaatctctgtcggtttctttggagcaaggtcttccaccgactgcagcgtcg
cccaaagcgctcggagacagactctactccaacggacactttagcgactcggactccaac
acgggaatgtctttacctctgcggtcgtccctgaacggccgctgtgggaatggatccgag
gaacacattcacgggatgtcggacgttcctcacgacgttgatctgtgcttggtgtctccc
tgcgagttccagcacccgaagactccagagaaccagcagcagaaccctggcctcaacaac
aaccactcccaggatcagagcagcagcggttgcccgtcggcctacagccaggagactccg
cccacatccgtcagcgactcgttcccgacggcgaccgactcggacgtcccccccggcacc
gaggactgcccctccatcaccgccgacatcgactctgacgacgactccagcggcttcctc
cctcccaaccctccactagatcatctcagtcctccgttccctcacagagcggcgtctcac
gacccgccgcccgccccggtcaaagacctgccgccgctgccccccccgcacggagcctgc
atggccgacccagaagccgacgcagcaaacaagtccaccaagagttcggccgccaagacc
aagaaagcagcaggtccggcgctgaaggcgacaggaagcagcgctgcacacaacgggaag
tccaaagcaggaagctccactctgaagacgagctccagccacgatgtgaagccttcggcc
cgaaactcactcggtggctccagaactggaccagcgagacctggatcctcagcctctaaa
tctgcgggttctgcgggttctgagggttctgcggtctacgtggatctggcctacctgccg
tccggctccgcctcggcctccctgaacctggacttcttcaagcggcttcgctcctcgtat
tacatcgtcagcggagaagatccagtgaaggaggaagccatgaggagaatcctggacgct
ctgctggacggcaagaacagctggccagatgttcaggtgactctcatcccgacgtttgat
tcgctggcgatgcacgactggtaccaggagactcacgataggcagagagagctgtcaatc
accgtgctgggcagcaacagcacggtggccatgcaggaggagaccttccccgcctgcaag
gtcgagttctga
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integrated database retrieval system
