Scomber japonicus (chub mackerel): 128362401
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Entry
128362401 CDS
T09718
Symbol
abca7
Name
(RefSeq) phospholipid-transporting ATPase ABCA1
KO
K05641
ATP-binding cassette, subfamily A (ABC1), member 1
Organism
sjo
Scomber japonicus (chub mackerel)
Pathway
sjo02010
ABC transporters
sjo04148
Efferocytosis
Brite
KEGG Orthology (KO) [BR:
sjo00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
128362401 (abca7)
09140 Cellular Processes
09141 Transport and catabolism
04148 Efferocytosis
128362401 (abca7)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
sjo02000
]
128362401 (abca7)
Transporters [BR:
sjo02000
]
ABC transporters, eukaryotic type
ABCA (ABC1) subfamily
ABCA1, 2, 3, 4, 7, 12, 13 subgroups
128362401 (abca7)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_tran
ABC2_membrane_3
R1_ABCA1
AAA_21
DUF4162
AAA_23
Motif
Other DBs
NCBI-GeneID:
128362401
NCBI-ProteinID:
XP_053179119
LinkDB
All DBs
Position
7:22766775..22796265
Genome browser
AA seq
2372 aa
AA seq
DB search
MGFLRQLGLLLWKNITYRRRNKIQLIIELLWPLFLFVILISVRHSHPPYKQSQCHFPNKA
LPSAGTLPWIQGIICNINNPCFHSPTPGETPGQVGNFDNSIISRLFVDAQSVLSYSGNRS
FSGFQDLMASVWRLGERPGAWPNLPVEEYLRPNETFSTFLLTNGSLSPATVDQLMKARLN
LQVAVVGGQTQLKDLVCDADMLGLFLTTDRGEASMTDLQTQLCDLPADILQEAERRFISQ
LDFTKFFTRDRLMANAGDLRVISQAVTSASQELAVLVDDFSSLSSFTEMSTALRLLSPEN
RTTLPRESFRAFSSIMCGHPEVGGEQIPSLNWYEDNDIKSFLGKNGTEDTNLDQYNTTTP
FCKSLIQGLESNPLSRIVWRGIKPLFIGKLLYTPDTPEVQQVMKEVNKTFEDLQILQELN
EAWIEVGPQIKNYMESSVEIQLLQDLLKRPEVAVLVNMRLENTSWTASRITRFLSTPSPD
TPRRPGAPPTWLDIYNDVSHTITMLAQVTECFSLNKLEGFETEGQLVDRALELLEEREFW
AGVVFMLPNSSSPKLPSHITYKIRMDIDDVTRTNKIKDRFWDPGPAADPFNDMRYIWGGF
VYVQDLVERAVTRILSGVKQTTGIYIQQMPYPCYVDDVFLRVLNRSLPLFMTLAWIYSVA
MIIKGVVYEKEARLKETMRIMGLSTGTLWLSWFISSIVPFLGSAALLIAMLKWGDILPYS
DPAVVFFFLTAFATATIMQCFLISTFFSKANLAAACGGVIYFSLYLPYVLCVAWRDHLKT
THRVFASFLSPVAFGFGCEYFSQYEEQGVGIQWYNLHSSPVEGDSYSFTTSIVMLYVDAF
IYAIAAWYIEAVFPGEYGIPRPWYFIFQVNFWIGVPLEAGMPIPPAPTEEDENHIEPEPS
NLILGVNITDLVKIYKKGAKPAVNHLNLKFYEGQITSFLGHNGAGKTTTISVLTGLFPPT
WGTVYIKGMDIRYHMDIIRRTLGVCPQHNVLFDILTVEEHVWFYGRLKGLSEAEVKAEMD
TLLDDVGLLQKRHEQTKNLSGGMQRKLSVAIAFVGGSKVVVLDEPTAGVDPYSRRGIWDL
LLKYRKDRTIILSTHYMDEAELLSDRIAIISQGKLCCCGSPLFLKTKQGSGYDLTVVKRA
GLDTSMPSSTSISTSTSTSTNKLPPLTKDSESSMSEDTGLGSEESNSYLAALLALAQHHI
PDAKLVEESGREFINLPQTSAKDSSLAVFLAELDQRLNELGLSSYGLSDSTLEKIFLKVA
EETGVDAEPERQDEPSPSQQQSGQRVERQHAEEPETEHDETDPLGGDGQGGLPLTGWWLT
WQQLRALFIKRWLYARRSRRGFFAQIVLPAVFVLIALLFSLIVPPFGKYPSLQLQPWMYG
EQYTFYSNDAPGNPAMENLLEALLDQPGFGTKCMEKEEKDNSTSPQCESERSSFFMRPQL
SYSTWQMFSRGNWSKERPSPDCQCSTEEIRRMLPDCPRGAGGLPPPQIKRLTGDILQNLT
SYNVSDYLVKTYSQILKKSLKTKKWVNEFRYGGFSLGGSATQTLSQVHHVEDSILAIRTR
YQVPQNSSLDNLLNRLPGVLEGLNSQNNVKVWYNNKGWHAMVSFVNVMNNGLLRASLPSG
SERRKHGITVYNHPLNLTKEQLTEMAMVATSVDVLVSICVIFAMSFVPASFVLFLIEERA
SKAKHLQFVSGVKPILYWLANFTWDMLNYTVPATMVVLIFISFQQQSYVSETNLPALILL
LLLYGWSITPLMYPASFVFSVPSTAYVFLTSINLFIGINGSIATFVLELFVDEHLNEVNR
ILKKVFLIFPHFCLGRGLIDMAKNQAMADAFQRLGTKQTLDPLQWDFVGKNLFAMAAEGV
IFFIFTILLQYKFFIRYRPWWNEPEIPPLGPEDEDVARERERVKSGKAQADILTMIDLSK
VYKAGRKPAVDRLCLGIPRGECFGLLGVNGAGKTSTFRMLTGDTPVTCGEAFLKGYSVLT
EMERVHQLMGYCPQFDAISDLLTGREHLELYARLRGVPEESVNKVAQWGVKKLGLTQYAE
REAGGYSGGNKRKLSTAISLIGAPPVIFLDEPTTGMDPKAKRFLWDCILSVTQEGRAVVL
TSHSMEECEALCTRMAIMVNGRFQCLGSVQHLKNRFGDGYTIILHLADTNTDPDSCPIDT
YMKTSFPSIELKERHQNVLRYQLPSHACYLARAFDMLANNYEELGIVDFSVSQTTLDQVF
VNFAKEQTDDDHLTDVVISNGTIQTNVASLCTQINPPTIQAPPSITPPQPSTTPQQHKKS
PDRKPKEGTSKQAKSSKGKSKEGNKEKSSDTAMSRIPQPVTSRKSSSGSNSSYSGAQGET
SKPSGSKHTGESSSKDPSALFIIGTNTQDSSL
NT seq
7119 nt
NT seq
+upstream
nt +downstream
nt
atgggatttctcaggcagctcggtctcctgctctggaagaacatcacataccgcaggaga
aacaagatccagctgatcatcgagctcctctggccgctcttcctctttgtcatcctcatc
tctgttcgtcattctcaccctccttacaaacagagccaatgtcactttccaaacaaagcc
ttgccatcagcaggcaccttgccctggattcagggcattatctgcaacatcaacaatccg
tgcttccacagcccgacaccgggggagacaccgggccaagttggcaactttgacaactcc
ataatttctcgtctcttcgtggacgcccagtcggttctgtcctacagtggaaaccggagc
ttctctggctttcaggatctgatggcgagcgtttggaggctgggagagagacctggagcc
tggccaaatctcccagtagaagaatacctgagacccaatgagacgttctccaccttcctg
ttgaccaatggcagcctgtcgcctgcgactgtggaccagctgatgaaagctcgtctcaat
cttcaggttgctgtggttggaggtcagacccagctgaaggacttggtgtgtgacgcagac
atgttaggactgtttctgacgacggacagaggagaagcaagcatgacggacctgcagact
cagctgtgtgacctgccagctgacatcctgcaggaggctgagcgccgctttatctctcag
ctcgactttaccaagttcttcacgagagaccgtctgatggccaacgctggcgacctcagg
gtcatcagccaagctgtcacctcagcttctcaggagctggctgtcctcgtggatgatttc
tcctctctctccagctttacggaaatgagcaccgcactccgtcttctgtctccggagaat
cggaccacgctgcccagggaaagtttccgggctttttcaagtatcatgtgtggtcaccct
gaggttggcggcgagcaaatcccatcactcaattggtatgaagacaatgacatcaagtcc
ttcttgggcaaaaatggcactgaggacaccaacctggaccagtacaacaccaccactcca
ttctgtaaaagtctgatccagggtctggagtccaaccctctgtctcgcattgtgtggcga
ggaatcaaacctctgttcatcggaaaactgctgtacacaccagacactcctgaagtacaa
caagtcatgaaggaggtgaacaagactttcgaggacctgcagatcctccaggagctgaac
gaagcctggattgaagtgggaccacaaatcaagaattacatggagagcagtgtggagatt
cagcttctgcaggatttgttaaagcggcctgaggtcgcagtgctggtcaacatgcgcctg
gagaacacatcctggacagcctcacggatcacacgtttcctgtccacaccctcgccagac
acccctcggaggcctggagcacctcccacctggctggacatctacaacgacgtcagccac
accattaccatgcttgcacaagtcacagagtgtttctccctgaacaaattggaggggttt
gagactgaaggtcagttggtcgacagggcgctggagctactggaggagagggagttttgg
gcaggtgtggttttcatgcttcccaactcctcgtctcctaagctgccgtctcacatcacc
tacaagatccgaatggatattgatgatgttacccgcaccaataaaattaaggacaggttt
tgggatcctggtccagcagcagacccgttcaacgacatgcgctacatttggggcggcttt
gtgtatgtccaggacctggtggaaagagctgtgacccgcatcctgagcggagttaaacaa
acaactggcatctacatccagcagatgccatacccctgctatgtggatgatgttttcctc
cgagtgctgaaccgctctttgccgctttttatgacactggcctggatctactcagtggcc
atgatcatcaagggcgtggtgtacgagaaggaggcaaggctgaaggaaaccatgaggatt
atgggtctgagtacgggaacgctgtggctcagctggttcatcagcagcattgttcctttc
ctggggtctgcagcgctccttattgctatgctcaagtggggggacatcctgccatacagc
gacccagctgttgtgtttttctttctgacggcatttgccactgccacaatcatgcagtgt
ttcctcatcagcaccttcttctccaaggccaacctagctgctgcctgcgggggggtcata
tacttcagcctctacctgccctatgtattgtgtgtggcctggagagaccacctcaagacc
actcacagagtctttgctagtttcctctcccctgtggcatttgggttcggctgtgagtac
ttctctcagtatgaggaacaaggcgtgggcattcagtggtacaacctgcactcgagtcct
gtggaaggagattcttacagcttcactacctctatagtcatgctttacgtggatgccttc
atctacgctatcgcagcctggtacatcgaagccgtgttccctggtgaatatgggatcccg
agaccctggtacttcatcttccaggttaacttctggattggagtccccctggaggcgggc
atgccaatcccccctgcgccaacagaagaggatgaaaatcacattgaaccagaacccagt
aatctgatccttggagtgaacataacagacctggtgaaaatctacaagaagggagccaag
ccggccgtcaaccacctcaacctgaagttctacgaggggcagatcacctcatttctcggc
cacaacggagctggcaagactacgaccatatctgtcctgactggactgtttccacccacc
tgggggacggtgtatatcaaggggatggacatccgctatcacatggacatcatccggagg
acactgggagtttgtccacagcataatgtcctgttcgacattctaacggtggaggagcac
gtgtggttttatgggcgtctgaaaggtttgtctgaagcagaggtgaaggctgagatggac
actctgctggacgacgtcggtctgctgcaaaagcgacatgaacagaccaagaacctctct
ggtgggatgcagaggaagctgtctgttgcaatagcgtttgtcggaggctccaaggtggtt
gttctggatgaacctacagctggcgttgacccttactcccggcgagggatctgggatctg
ttgctcaaataccgtaaagatcggaccatcatcctgtccactcattacatggacgaggcg
gagctgctaagtgaccgtattgccatcatttctcaggggaagttgtgctgctgtggctcg
ccactctttctgaaaactaaacagggatctggctacgacctcactgtggtcaagagagct
ggactagacaccagcatgcccagcagtaccagtatcagcaccagtaccagtaccagcacc
aacaagctgcctcctcttaccaaggacagcgagtcctccatgagtgaagacacagggctg
ggaagtgaggagagcaactcatacttggcagctttgctcgccctggcgcagcaccacatc
ccggatgcaaagctggtggaggagtcggggcgtgagttcatcaacctgccacagacgtcc
gccaaggacagcagcctggctgtcttcctggccgaactggatcagaggctgaatgagctg
ggcctcagcagctacggcctgtcagacagcacactggaaaaaatctttctgaaagttgca
gaggaaaccggtgtggatgctgaaccagagcggcaggatgaaccttcccccagtcagcag
caatcagggcagcgagtagaaagacaacatgctgaagaaccagagacagaacatgatgaa
acagacccgctaggcggagatggccaaggcgggttacccctgactggatggtggctgacc
tggcagcagctgagagctctcttcatcaaacgctggctttacgctcgcaggagccgcaga
ggtttcttcgctcagattgttctgcctgctgtgtttgtgctcatcgcactgctcttcagt
ctcatcgtaccgccgtttgggaagtacccttctctgcagctccagccctggatgtatgga
gagcagtataccttctatagcaatgatgcccctggaaacccggcaatggagaacctgctg
gaggctctgcttgaccagccaggttttggtaccaagtgcatggagaaagaggaaaaggac
aacagcacgagccctcagtgtgaaagcgagcggagcagcttcttcatgcggccacagttg
tcatactccacctggcaaatgttcagcagaggcaattggagcaaagagagaccctctcct
gactgtcaatgcagcacagaggaaattcgccggatgctcccagactgtccgcggggtgct
ggtggacttccgcctccacagatcaagaggctaactggagacatcctccaaaatctgaca
agttataacgtctctgattatctggtgaagacctactctcagatccttaagaaaagcctg
aaaaccaagaagtgggtgaatgaattcagatatggaggcttctctctcggaggcagcgcc
acccagactttatctcaagtgcatcatgtcgaagactcgatcttggcaatcaggactcgt
taccaagttccacagaatagttcactggataatctcctaaacagactgccaggtgttctc
gaaggactaaacagtcagaacaatgtgaaggtgtggtacaataacaaaggttggcatgca
atggtgtcatttgttaacgtgatgaacaacggcctgctgagagccagcctgccatcaggt
tcagagaggagaaaacacggcatcactgtctacaaccacccactcaaccttaccaaggaa
caactcaccgaaatggccatggtggccacatcggtggatgttctggtttctatctgtgtg
atatttgccatgtcctttgtgccggccagctttgtcctttttctgattgaagagcgagcc
agcaaagccaaacaccttcagtttgtcagcggggtcaaaccaatcctctactggctggcc
aactttacctgggacatgctgaattacactgtccccgccaccatggtggtgctgatcttc
atcagtttccaacagcagtcgtacgtctctgagaccaacctgcctgctctcatcctgctc
ctactgctctatgggtggtccatcactcctttgatgtacccagcatcctttgtgttctcc
gttcccagtacggcctatgtctttctgacctccatcaacctcttcatcgggatcaatggc
agcatcgccacattcgtgttggagctgtttgtagacgagcacttgaatgaggtgaacagg
atcctgaagaaggtgttcctcatattccctcatttctgtctcggacgaggactcattgac
atggccaagaaccaggccatggcagacgcctttcaaagactgggcaccaaacagactctg
gaccctcttcagtgggactttgtagggaagaacctcttcgcgatggcagctgaaggcgtt
atcttcttcatcttcaccatactgctgcagtacaagttctttattcgctacaggccgtgg
tggaacgagcctgagatacctcctctcggcccagaagatgaggacgtggcaagggagaga
gagagggtcaaaagtggcaaggcccaagctgacatcctcaccatgatagatctcagcaag
gtttacaaagcaggaaggaagccagcagtcgatcgtctctgtctggggattcctcgtggc
gagtgttttggcctgctgggggtgaatggagcagggaaaacttctacatttcgcatgctg
acaggagacacacccgtcacctgtggagaggctttcctcaaaggctacagtgtgctgaca
gagatggagcgagtccaccagctgatgggttactgtccacagtttgatgccatcagtgac
ctgctgacaggtcgtgaacatctggagctttacgcccgcctgcgaggggtgccagaagag
tctgtcaacaaggtggctcagtggggggtgaagaagctgggactcacccagtatgctgag
cgagaggccggaggctacagtggaggcaacaagaggaaactctccactgccatttccctc
atcggggctccgcctgttatattcctggacgagcccaccactggtatggatccaaaggct
aaaagatttctgtgggattgcatcctcagcgtcacccaagagggaagagctgtagttctc
acctcccacagcatggaggaatgtgaggctctctgcaccagaatggccatcatggtcaat
ggcaggttccagtgtcttggatctgtacaacacctgaagaacaggtttggtgacggctac
accatcattctccatctggcagacaccaacaccgacccagactcgtgcccgatcgacacc
tacatgaagacatccttccccagcatcgagctgaaggagcgccaccagaacgtgctgcgg
taccagctgccctcacacgcctgctacctggctcgtgcctttgatatgctggccaataac
tatgaggagctgggcatcgttgacttctctgtctctcagactactctagaccaggtgttt
gtcaactttgccaaagagcagactgatgacgatcacctcacagacgtagtcatcagcaac
gggacaatacagaccaatgtggcaagcctgtgtacccagatcaacccacccaccatccaa
gcaccgccatcaatcacaccccctcagcccagtacgaccccacagcagcacaagaaatca
cctgacaggaaaccaaaagagggtacatcaaaacaagctaaaagtagtaaaggcaagtct
aaagaaggcaacaaagagaaaagcagcgacacggcgatgagcagaatacctcaaccagtg
acgagccggaagagtagcagtggctcaaacagcagttatagtggtgctcagggagaaacc
agtaaacccagtgggtccaaacacacaggagagagctccagcaaggatccttctgcactc
tttataatcggcaccaacacacaagacagctcgctgtga
DBGET
integrated database retrieval system
