Scomber japonicus (chub mackerel): 128362403
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Entry
128362403 CDS
T09718
Name
(RefSeq) contactin-associated protein-like 4
KO
K24337
contactin associated protein-like 3/4
Organism
sjo
Scomber japonicus (chub mackerel)
Brite
KEGG Orthology (KO) [BR:
sjo00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
sjo04990
]
128362403
Domain-containing proteins not elsewhere classified [BR:
sjo04990
]
Laminin domain-containing proteins
Laminin G domain-containing proteins
128362403
BRITE hierarchy
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Paralog
Gene cluster
GFIT
Motif
Pfam:
Laminin_G_2
Laminin_G_1
F5_F8_type_C
Laminin_G_3
EGF
Adeno_E3_CR2
Motif
Other DBs
NCBI-GeneID:
128362403
NCBI-ProteinID:
XP_053179123
LinkDB
All DBs
Position
7:27512145..27572564
Genome browser
AA seq
1198 aa
AA seq
DB search
MFSDTGHNWRQHRQEDSLGAFSGNSNADTVVQYKLQQPVIARYLRLIPLDWNPTGRIGLR
LEIYGCRYTSDVANFDGSSNLVYRLSMLPSRTSMEIISLKFKTLKNSGTLFHAEGRRDHS
LTLVLEKGRLLLYHQKGVTSPSGGQLLVSLGSLLDDQHWHYVKLERLSTHLNLIVDKNTQ
QVHIPTELSHWDIHQLSLGAVQSHGLQKPILSNRNFHGCLENLLYNDLKLIDLAKKTNPQ
VTMVGNVTFSCAEPVSVGVTFTDSHSFLQLPGPTSWSSGLISVALQFRTWNRAGLLLTFN
LPEQQGIVWLYLSETRLHLQINKTGRTLLDLSAGSGLSDGQWHSVEFNSTHDHLSITVDK
DEGAIAHTSIPLPLTNSQLFFGGCPAQESSQECRNPFKAFQGCMRLLSLDSQSVDLIKVQ
QRLLGNYSHLQIDMCGIIDRCSPSHCEHGGRCTQSWSAFHCNCSNGGYRGATCHSSTYEQ
SCEVYKHKGNTSGHYYIDMDGSGPIKPQLIYCNMTDRAWMVIQHNNTELTTVHSSPETNQ
YSAHFDYISEEEQLAAIISQSEHCEQELSYHCRRSRLLNTPDGDPFSWWVGGPGTGQVQK
YWGGALPGSQQCACGLQDSCLDRNHYCNCDADYDQWANDSGLLTHKETLPVKSLVLGDIQ
RPGSEAAYRVGPLRCHGDKNFWNAAFFDKETSYLHFPTFHGELNADISFLFKTTSSSGVF
LENLGIKDFIRIELSSSFEVIFSFDVGNGPLEVRVVTSVPLNDNRWHSVQAERNVKEASL
RVDEFPASTQEAPSDGHIHLQLNSQLFIGGTASRQKGFLGCIRSLQLNGITLDLEERARI
TPGVRPGCPGHCSSYGSLCQNQGRCVERANGFSCDCGQSAYTGAFCHKEISANFKSTTSI
AYILKEPYELSRNSSALPWSVYSDMTLKGENISLSFRTSQSPALLLYVNSFYREYLALLI
NKHDELELRYKLHSSGDADVLESRVMNLADGNLHTVVIRRLADSVSIQIDQNAKEDFNLT
SDVEFNSIKSLILGRVHESDELDAELATLASLGFTGCLSAVHFNSISPLKAALLHPDSPV
IITGPLAESSCGSSSAVNSYVAETTHSLSDQPASVDPGQPLVNAIRSDSALIGGVIAVVI
FIAVSALAIMARFICSRKETYRNQEVKAAQPEDSHEFPFSSQADSQSAPSENQKEYFI
NT seq
3597 nt
NT seq
+upstream
nt +downstream
nt
atgttcagtgacacgggacacaactggagacagcaccggcaagaagacagtttaggggct
ttttcaggtaacagtaacgctgacaccgtggtccagtacaaacttcaacagccagtgata
gctcgctacctccgccttatccctctggactggaaccctactgggcggattggactcaga
ctggaaatatatggatgtcgatacacttctgatgtggcgaactttgatggcagcagcaac
ctggtctacaggctgagtatgctgccgagccggacgtccatggagatcatttctctgaag
tttaaaaccctgaagaattctgggacattgtttcacgcagagggacggagggatcacagc
ctcactctggtgctggagaaaggaaggctgcttctctatcaccaaaaaggtgtgacttca
ccctccggcggccagcttcttgtttctctgggaagtctactagacgatcagcactggcac
tatgtaaagctggagcggctcagcactcaccttaacctcatagtggataaaaacacacag
caagttcacattccaacagagctcagccactgggacattcaccagctaagtctgggagct
gtccaaagccacggacttcagaaacccatcctttccaacaggaacttccatggctgcctg
gaaaacctgctgtacaatgatctcaaactgatagacttggctaaaaagaccaacccccaa
gtcactatggtgggcaatgtgaccttttcatgtgctgagccagtttcagttggtgtgacg
ttcactgactcccacagcttcctccagttgccggggccgacatcgtggtcatcggggttg
atctccgtagctctgcagttcaggacgtggaacagggcggggctgctcttgacctttaac
cttccggagcagcagggcatcgtctggctgtacttgagtgagaccagacttcacctacag
atcaataaaactggcaggaccctgctggatctcagcgcaggctcgggtctaagtgatggt
cagtggcattcagttgagttcaactctacacacgatcatctgagcatcacagtggacaaa
gacgaaggagccattgctcacaccagcatccctcttcctctcacaaacagtcaactcttc
tttggtggttgtcctgctcaggagagcagtcaggagtgtaggaacccctttaaagctttc
cagggctgtatgcgtctcttgagtctagacagccaatctgttgacctcatcaaagtgcaa
caaagactgctgggaaactacagccacttgcagattgatatgtgcggcatcatcgacagg
tgttcccccagtcattgtgaacatggaggtagatgcactcagtcgtggagcgccttccac
tgtaactgctccaacggtggctacagaggagccacctgccacagctcaacatatgaacag
tcttgtgaggtgtacaaacacaaaggcaacacatcaggacattattacatagacatggac
ggcagtggaccaatcaaacctcagctcatatactgtaacatgacagacagggcatggatg
gtgatccagcacaataacacagagctgaccacagtgcattcatcgcctgagacaaaccaa
tattcagcccactttgactacatttctgaagaggagcagttagctgccatcatcagtcaa
tcagagcactgtgagcaggaactgtcctaccactgcaggaggtcccgtctcctcaacaca
ccagacggtgatccattcagctggtgggtgggaggtccaggtacaggccaggtccagaag
tactggggtggagctctgccaggaagccagcagtgtgcctgtggcctgcaggatagctgt
ctggatcgaaatcactactgcaactgtgatgcagactacgaccaatgggctaatgattca
ggcctgctcacccataaggagacacttcccgtcaagtctctggtgctaggtgacatccag
cggccggggtcggaggctgcctacagggtgggacccctccgttgtcatggagacaagaac
ttctggaacgccgcgttttttgacaaggagacgtcttaccttcacttccccacatttcat
ggagagctgaatgcagacatctcttttctatttaaaacaacatcctcctctggggtcttc
ctggaaaatctgggtatcaaggatttcatccggattgaactcagctcctcctttgaggtc
atcttctctttcgatgtcggcaacgggccattggaggtgagagttgtgacgagcgtcccg
ctgaacgacaaccggtggcacagtgtacaagccgagcgcaacgtgaaggaggcatcgctt
cgtgtcgatgagttccctgcctccacacaggaggctccatctgatggacacattcatctg
cagctcaacagccagctatttataggaggcacagcatccaggcagaaagggtttctgggc
tgtatccgctctctgcagctgaacggcatcactctggacctggaggaaagggcgaggatc
accccaggggtccgaccaggatgcccaggccactgcagtagctacggctcactctgccag
aaccaaggtcgctgtgtggagagagccaatggtttctcctgcgactgtggccagtcagcc
tacactggagccttctgtcataaagagatttcagccaacttcaagtcaacaacgtccatt
gcctacatcctcaaggaaccctatgaactgagcaggaacagcagtgccttgccttggtct
gtctactccgatatgactctgaaaggagaaaacatctccctgagcttcaggaccagccag
agtcctgctctgcttctgtacgtcaactctttctacagagagtacctggctctgctcatc
aataaacatgatgagctggaattgagatacaagttacacagcagcggagatgcggacgtg
ttggagagcagagtcatgaacttggctgatggaaatctccacacggtggttattaggaga
cttgcagactctgtctccattcagattgaccagaatgccaaagaggacttcaacttgacg
tctgatgtggaattcaacagcatcaaatcgctcattctgggtagagtgcatgagtctgat
gagttggatgcagaactggccacgttggcctctcttgggttcactggctgtctatcagca
gttcattttaactccatcagtcctctgaaagctgcactgctccaccctgacagccctgtt
atcatcacaggtccactggctgagtcaagctgtggttcctcctctgctgtcaattcctat
gtagcagaaaccacacactctttatcagaccagcctgcttcagtggatccaggtcaacct
ttagtcaatgccatcaggagtgactcagctctaattggaggggtaattgctgtggtgatc
ttcattgctgtgtctgccttggcaataatggcgagattcatctgcagcaggaaagagacg
tatcggaaccaggaagtaaaggcagcgcagcctgaagacagccatgagtttccctttagt
agccaggcggactcccagagtgctcccagtgaaaaccaaaaggagtatttcatttag
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