Scomber japonicus (chub mackerel): 128362427
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Entry
128362427 CDS
T09718
Symbol
syde2
Name
(RefSeq) rho GTPase-activating protein SYDE2
KO
K20655
Rho GTPase-activating protein SYDE
Organism
sjo
Scomber japonicus (chub mackerel)
Brite
KEGG Orthology (KO) [BR:
sjo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
sjo04131
]
128362427 (syde2)
Membrane trafficking [BR:
sjo04131
]
Others
Rho GTPase associated proteins
Rho GTPase-activating proteins
128362427 (syde2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RhoGAP
Motif
Other DBs
NCBI-GeneID:
128362427
NCBI-ProteinID:
XP_053179163
LinkDB
All DBs
Position
7:26758579..26806511
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AA seq
1732 aa
AA seq
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MADPLRRTLLAKLRGKKSKKGATVGGGYGSAAVNGGREGKEKVLQRDSDEARPVVLISEL
DCTTERMSTYENCVDGAMVQTGGVIIVRGSRAAEVAGARPQEPSSSGGRGRVNEELLGVS
LQRETAQFGGDVRGADRSHQGPRSADSITLSAGVPLGGPHVQRKHSVSVGDSIGFGDNSN
HVLSCVRVEPHTEVCKPPEGRVTTADSEPLDRELPRHMAGTVVAVNVHNANWSFDNNQTL
ETISPVCAALVNPNCISGNTEENILIRNIESYEPEYTGDIRGTVGCLQSPTFFPTELDIC
DINMASMCATEGSLRYPLDSEDEDYYDNEILPFYETIRAKSAGDRAEVAELPQSGHDKGQ
TDESNSAQETDRLRNQLKEAYYLLINAMNDINLDVQQISGGLTEQQATSSCSSHSRDSLC
SRLSAKNMDSDSWSSGGDHSPQQVSDTDSLLVCLSGNIESGLKGRLNSKSMLNLSMAKIR
PTLLRSASDGAIRYHPGGPLLCIKAPGTQSPESCSDTGAAEVKSAKQGEGAKITGVGELS
DPPVLYNATSSEELLQDAGCEEDRGGQLNESSSSVNSLTGSSDSNAEASSHQGHDNKQEL
SGGVRAQGANSVNKGHGVTVNKMQEWMHKGRLLSSEMKQRIEGSSPSLPRGGGQNQDQAN
LGGCKPGVHTSNRGVKSVKAKSPTVKSPRQQQQPAFIENVQTPCANSREAGRANELSTWR
PHLNTITVSKKRNWLQQSSLGRNHCTKDELQGMVGAEEEGCQFSHQPPPPPSPSPDHLRP
PGAAPSRPVRLHLPQVSVSQAKLSPHPRSVDPAEENDADDEGEIWYNPIPEDDELDMSHR
PSVRLLVPPRVEPQRRPNRGGDMGHNGRTLEGGGGGAGPEVLGESLGGGGSTGDGSQGNA
VHSTEALHLHRQMLACKPQEEGGPSTSRAKDGPDLPNTVGFSPPSSPNPAKKSSSINWSF
PDKIKSPRTVRKISMKMKKLPELSRKLSVKGTPSSSNSSNSNGSSHLEPRAHSFRTSGSG
SDANSHSSGPQRLAGSGGGQARRNVISRYHLDSSVSTQHSFSKKKSDGSSKSASKGGYLS
DGDSPELVAKSGKHSSADGKGGKGKETEGGGGSSKLSGTELDIDAFRHYSFTEQPKCSQY
ISGLMSLHFYGAEDLKPPRIDSRDVYCAIQVDSVNKARTALLTCRTTFLDMDHTFNIELE
NAQHLKLVVFSWEPTPRRNRVCCHGTVVLPALFRVTRSHQLAVKLEPRGLIYVKLSLMEQ
WQNSLDGGPDRDREPQVFGVEAWRVVEREETGLMVPLLISKCINEIEKRGCQVVGLYRLC
GSAAVKKELREAFERDSYSVELCENTYPDINVITGVLKDYLRELPYPLITKHLYEAVLES
MAVRPLRIGAGGCENDQADSEHTVSLLEILPEVERMTLRKLLDHLKLVASYQEVNKMTCQ
NLAVCFGPVLLSQRQEASCHTNRVFIDSEELASALHFKKHIEVLHYLLQLWPVIDPNAQS
SSPTPAASSDLLSAPIRRRKERPQVLNLSEAEMVGVLRPKPGRLDSPSNRYAGDWSGCGE
SYFPCEMLLPPSKEEADYDDVPSEDTEASEERQEKPEGTEEGKVSDLTEQEQTLREEVVK
ESEKQVEKEEEDEDDEEEEEEKQEESDDSGNRQLLEEEEQEEEEEEEEERVCDHILPPRL
PKEHTYQAYMKIQDISPVLSNRVNLRDLQESIDTLIGNLERELNKNKLNVGY
NT seq
5199 nt
NT seq
+upstream
nt +downstream
nt
atggctgatcctctgcggaggactttactagcgaaactccgggggaagaaatccaagaaa
ggagcgactgtcggtggtggatacggctccgctgcggtgaatgggggccgagaaggtaaa
gaaaaagttttgcagcgagactccgacgaggctcgtccggtagtcttgatctcagagctg
gattgcacgacagagagaatgagtacgtacgagaattgtgttgacggggcgatggtgcaa
actgggggggttataatagtccgggggagccgtgcagcggaggtggccggcgcacgtccc
caggagccgagcagcagcgggggtaggggtcgggttaatgaggagctcctgggggtctca
cttcaaagagagacagcgcagtttgggggagatgttaggggagcagataggagccaccag
gggcccagatccgctgacagtatcacgttatcggcgggggtaccactcggaggaccgcat
gtccagaggaaacactccgtctcggtcggggattcaatcgggtttggggacaattcaaat
cacgttttgtcctgcgtacgggtagagccgcacaccgaggtctgtaagcctccagagggc
cgggttactaccgctgatagcgagcctctggacagagaactgccccggcacatggcaggg
actgtagtggctgtaaatgtacacaacgccaactggagttttgacaacaaccaaactttg
gagacaatctcaccagtttgcgcagcacttgtgaacccaaactgcatctctggcaacaca
gaagaaaacattttaatcagaaatattgagagctatgagcctgagtatacaggggacatc
agggggacagtaggttgtctgcagagcccgacttttttccccacagagctagacatatgc
gacattaacatggcatccatgtgcgccacagaggggtcgcttagataccctttagacagt
gaagatgaggattactatgataacgaaattctgcctttttatgaaactattcgagcaaaa
agtgctggtgacagagcagaggttgcagagctgccacagtcaggtcatgataaaggacag
actgatgagagtaacagtgctcaggaaacagacaggcttagaaaccagctgaaagaagct
tattacctcctcatcaatgctatgaatgatatcaacctggatgtgcagcagattagtggt
ggtttaacagaacagcaggccacctcctcctgtagtagccactccagggatagtctgtgc
tcaaggttgtctgccaaaaacatggacagtgactcctggtcctcaggaggtgaccacagc
ccacagcaagtgtctgacactgactcattgctggtttgcctcagtggaaacattgagtca
ggccttaaaggtagactgaacagtaaaagcatgttgaatctgtccatggccaagataaga
cccacattattgcgctctgctagtgatggagctatcaggtatcatccaggtggaccgtta
ctgtgtattaaagctcctggaacacagagtccagaaagctgtagtgatactggggctgca
gaggtaaaatcagctaaacagggtgaaggggctaaaatcacaggagtaggtgagctgtca
gatcctccagttctttacaatgccaccagcagtgaggagctgctacaagacgccggctgt
gaggaggaccgtggcgggcagctcaacgagagcagcagctcagtcaacagcctcacaggc
tcctcggacagcaacgcagaggcctcgtcgcatcagggtcacgacaacaagcaggagctg
agcggtggagtccgagcgcagggggccaactcggtcaacaaggggcacggcgtcaccgtc
aacaagatgcaagagtggatgcacaaggggcggttgttgtcttccgagatgaagcaacgc
attgaaggctcgtcaccgtctttgccccgcggtggaggccaaaaccaggaccaagctaac
ctcggggggtgtaaaccaggggtccacacatccaaccgaggggttaaatctgtcaaggcg
aagtcacctacagtcaagtcaccacggcagcagcagcagccagctttcattgagaatgtc
caaaccccctgcgctaacagtcgtgaggcaggcagggccaatgaactttcaacatggcga
ccgcatctcaacaccatcactgtctccaagaagcgcaattggctgcagcagagttccctt
gggaggaaccactgcaccaaggacgagctgcagggaatggtgggagctgaggaggagggc
tgccagttttcccatcagccacctcctcctcccagtccctccccagaccacctgagaccc
ccaggggcagctccttcacggccggtccgcctgcacctgcctcaggttagcgtcagtcag
gccaagctgtctcctcaccctcggagtgtggacccagcagaggagaacgacgcggacgat
gaaggagagatctggtataacccgatcccagaggacgatgagctggatatgtcccacaga
ccctcagttcggctgctagtcccacctcgagttgagccccagaggaggccaaacagggga
ggagatatgggtcacaatgggaggaccctggagggtggcggtggcggcgccgggccggag
gtgctcggggaaagcctcggtggtggtggcagtacaggagatgggagtcaggggaatgct
gtacattccacagaggcgctacatctgcacagacagatgctcgcgtgcaaacctcaggag
gagggggggccttccaccagcagagccaaagatggtcctgatctgcccaacaccgttggc
ttctccccaccctccagtccaaaccctgcaaagaagagcagctccatcaactggtccttc
ccagacaagatcaagtccccacgtaccgtcaggaagatttccatgaagatgaaaaagctc
ccggagcttagccggaaactcagcgtcaaggggaccccgagtagcagcaacagcagtaac
agcaacggaagcagccacttagagcccagagctcactccttccgaaccagcggcagtggg
tcggatgctaattcccactcttcgggccctcagagattagctggttctggaggtgggcag
gcaaggcgtaacgtcatctcacgttaccacctggacagcagcgtttccacacagcacagc
ttcagtaagaagaaaagtgatggcagctcaaagtccgccagtaaaggtggctatcttagt
gatggggactcaccagagctggtggccaaatctgggaagcacagctctgcagatgggaag
ggagggaaaggtaaggagacagaaggaggcggtggaagctccaaactcagtggcacagag
ttggacattgatgctttccgccattacagcttcacagagcagcccaagtgcagccagtac
atctccggactgatgagcctgcacttttacggcgctgaggacctcaaaccgccacgcatt
gactctcgtgatgtctactgtgccattcaagtggactcagttaataaagcacgaaccgct
ctcctcacatgtcgaactactttcctagatatggaccacaccttcaacatcgagttggag
aacgcccaacacctgaagctggtggtgttcagctgggagcccacgccgaggcgcaaccgc
gtctgctgccacggcacggtggtcctgcccgcgctcttccgtgtgacacgttcgcaccag
ctggcggtgaagctggagccacggggtctgatctacgtcaagctgagcctgatggagcag
tggcagaactcactggacggggggccagatagagacagggagccccaggtgtttggtgtg
gaggcgtggcgggtggtggagcgggaggagactggactcatggtgccactgcttataagc
aagtgcatcaatgagatcgagaagagaggctgccaggtggtgggtctttaccgtctttgt
ggctccgcagctgtaaagaaggagctacgtgaggcatttgagagagacagctacagcgtg
gagctgtgtgaaaacacgtatcctgacatcaacgtcatcacaggggtattgaaggactac
ctacgagagctgccctaccctttgatcaccaagcatctgtatgaggcagtgttggagtct
atggctgtgaggcctttgcgtatcggagcagggggctgcgagaacgaccaggccgactca
gagcacaccgtcagcctgctggaaatcctgccagaggtggagaggatgacactgcggaag
cttcttgaccacctgaagttggtggcgtcctaccaggaagtgaacaagatgacgtgtcag
aacctggcggtgtgtttcggcccggttttgctcagccagcgtcaggaggcgtcgtgccac
accaaccgagtcttcatcgactctgaggaactggccagcgcactgcacttcaaaaagcac
attgaagtcctgcactacctgctgcagctctggccagttatagacccaaatgctcagtct
tcttctccgacccctgcggcctcctcggacctgctgtcagctcctataagacgtagaaaa
gagcgcccccaggtgctgaacctcagtgaagcggagatggtgggtgttctgcggcccaaa
ccaggacgcctggacagccctagcaaccgctacgccggtgattggagtggttgcggagaa
agttacttcccttgtgaaatgctgctgcctcccagcaaagaggaggcggactatgatgac
gtgccctccgaggatacagaggcatctgaggagaggcaggagaagcctgagggtacagag
gagggtaaagtgtctgatctcactgagcaggagcaaactctgagagaagaggtggtgaaa
gagagtgaaaagcaggtagagaaagaggaggaggatgaggatgatgaggaggaggaagaa
gagaaacaagaagagagtgacgattcaggcaacaggcagttgttggaggaagaagagcag
gaggaggaggaggaggaggaggaggaaagggtgtgtgaccacatcttgcccccacggctg
cccaaggagcacacctaccaggcttacatgaagatccaggatatcagcccagtgctaagc
aacagggtcaacctgagagacctgcaggagagcatcgacactctgataggaaacctggag
agagagctcaacaagaacaagctcaatgtcggatactga
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integrated database retrieval system
