Scomber japonicus (chub mackerel): 128362485
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Entry
128362485 CDS
T09718
Name
(RefSeq) LIM and calponin homology domains-containing protein 1-like isoform X1
KO
K24422
LIM and calponin homology domains-containing protein 1
Organism
sjo
Scomber japonicus (chub mackerel)
Brite
KEGG Orthology (KO) [BR:
sjo00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
sjo04990
]
128362485
Domain-containing proteins not elsewhere classified [BR:
sjo04990
]
LIM domain-containing proteins
Other lim domain-containing proteins
128362485
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Gene cluster
GFIT
Motif
Pfam:
DUF4757
CH
LIM
Motif
Other DBs
NCBI-GeneID:
128362485
NCBI-ProteinID:
XP_053179196
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All DBs
Position
8:complement(26934558..27026964)
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AA seq
1240 aa
AA seq
DB search
MASPVADIGQSHQHHPVTESAADSAFQEAQKWIEAVTGRCFGDKDFRGGLENGILLCELL
SSIKPGLVKKINRLPTPIAGLDNLSVFLRGCEELGLKGSQLFDPGDLQDTSTRPTTKGSD
CIRKLKNVLITIYWLGRAANGCTSYNGPTLDLKEFEGLLSQMRKEVEEAESPKRSIRDSG
YIDCWDSERSDSLSPPRHGREDSFDSLDSFGSRSRQTPSPDVLVARGSSDGRGSDSESDG
APHRKMPDVRKDDMLARRTSVSEPRTAMPFNQYLPNRSNQSGYVPNPLRKKKSDKDEGGR
KSWSTATSPIGGDRPFSTPARSCSEELFHHPSTLAANATAASVVATSPVNTPGKHPPVTE
REKAGPRKGDVGVLLLADAERDDKRARRALTPPKHISIPSPSHFLPVPAAVVTATAAPTD
TGRRKGRALSESDNLQGGTSWLDSNPPATFSHTDSVSGDPQSVSMIDMRSEEEAILQPHS
QVRHELMHNQYNQMKEEEDHWQDDLARWKNRRRSISQDLIKKEEERKMMEQLMTGDGCIS
HRRRSIKTYREIVEDKERREEELRLAYRRARTPEEASVILNRYAQRFSISESVLERLQLP
KLLDRSISADPSFPTSPFPLSLSLSSSPTTPDPFDMDPNGPMKYLRQQSAPAPKFTSTLE
ARIEEFPKDTSVHPRHQIRSHSSEPPSTRALSPKPVPLLTPKPYIHPRPAAVEPLSSKAD
GLLRVNGNIGSDDVPTTPESQGRESPPHFHASPSKTSNSTVDVPSSTASPAHSTHASPGR
GGSPVSTKSAEAPGGTESPSEGVEQGKVTEHSTPPSRPTSLPTELQKPEESIEKSGGQTA
GAPEEEKSNAADQQTAPAETNQKQEKIEQNISKLDQSEDSTHESQPVTSQICSSLEWSQR
KEIVQSFTASASSGYDLPSETTEDFANSVRSPSATSNPKLRWDFFAPAEEAEKDRRGNEK
YQREQEKLKEEWEKAQREVAEEEKKYHEEERRILEETVAPLTPRSSALPSPSRGELSSTS
QPQDAIVRSLADWERKQEMLENQSRGSTESVEWKRRENDRTSDISTADDSMKTGRSSVSQ
SSSQVEMFGHSLQNGQKLPSVPAKTSTPVKKQQELKADSNKPSRPSGDRRSSPIDNNMGR
NSSKPPAACPPPPDTVPPAPNRSVSGKKLCSSCGQPLGKGAAMIIETLSLYFHIHCFKCG
VCKGQLGDTTTGTDVRIRNGLLNCHQCYIRSRSAGQPTTL
NT seq
3723 nt
NT seq
+upstream
nt +downstream
nt
atggcaagtccggttgcagacataggacagtctcatcagcatcaccctgtgaccgagtcg
gccgcagactccgcttttcaagaggcgcagaaatggatcgaggctgtgacaggaagatgc
tttggtgacaaagacttcagaggagggttggagaatgggatactgctgtgcgagttgcta
agctccattaaacccggcctggtgaagaaaatcaacagacttccaacacctatagctggc
ctggacaacttgagtgtgttcctgcgcggctgtgaggagttgggactgaagggctctcag
ctgtttgaccctggagacctgcaggacacgtcaacacgccccaccaccaagggaagtgac
tgcatccgaaagctaaagaatgttctaatcaccatctattggttgggtcgagctgccaac
ggctgtacctcctacaacgggcccacgctggacctgaaagagtttgagggcctgctgtca
cagatgcgaaaggaggtggaggaggcagagagccctaaacgtagcattcgggacagtggc
tacattgactgctgggactctgaacgcagcgactccctctctccgccacgccacggccgc
gaggactcgttcgacagcctggactccttcggctcacgctcacgacagaccccgtcgcca
gacgtcctggtcgcccgcggcagcagcgatggccgcggcagtgactcagagtccgacggc
gccccacaccggaagatgccagatgtccgtaaagacgacatgttggcgcggcggacttca
gtcagcgagccccggaccgccatgccttttaaccagtacctgcccaacaggagcaaccag
agtggatatgtgccaaacccgctccgtaagaagaagagcgacaaagacgagggaggacgc
aagagctggagtacagccacttcacctatagggggagacagacctttcagcactccagct
cgctcgtgctcagaggaactcttccaccatccgtcgaccctagcggcaaacgccacagca
gcatctgtggtcgcgacaagccccgtcaacacacctgggaaacatccacctgtcacagag
cgagagaaggccgggccgaggaagggtgacgtcggcgttctgttactcgcagatgcagag
cgagatgataagcgggcccgtcgtgcgctgacgccacccaaacacatcagcatcccgagc
ccatcccacttccttcctgtgcccgctgccgtggtaaccgctacagctgcaccgacggat
acaggacgtcggaagggaagggcgctgagtgaaagtgacaacctgcaaggagggacttct
tggttggacagcaatcctccagcaacattcagccacacagatagtgtgtcaggtgaccca
cagagtgtgagtatgatcgacatgcgtagcgaggaggaggccatcttgcagccccacagt
caggtgcgtcatgaactgatgcacaaccaatacaaccagatgaaggaagaggaggatcac
tggcaggatgacctggcccgatggaaaaacagacggaggagtatttcccaggatctgatc
aagaaggaggaggagaggaaaatgatggagcagttgatgacaggagatggctgtatctcc
cacaggaggaggagcatcaaaacctacagagagatagtggaggacaaggagcgtcgagag
gaggagctgcggttggcttataggagggccagaaccccggaggaggcgtctgtcatcctc
aatcgttacgcccagcgtttctccatcagcgagtcagtgctggaacgcctgcagctgcca
aaactcctggaccgcagcatatccgctgacccttccttccctacctcacccttcccactc
tccctctccctgtcctcctccccgacaaccccagatccctttgatatggaccctaatggg
cccatgaagtatctgcggcaacaatctgccccagctccaaagttcacatctacactggag
gcgcgaatcgaggagtttcccaaagacacgtctgtacacccgcggcaccagattcgctca
cattcgtctgagccaccatcaacccgagccctgtcgcccaaaccggtgcctttgctcacg
cccaagccttacatccacccccggcctgcagcggtcgaaccattgtccagcaaggcggat
ggtttgctccgagtcaacggtaacataggaagtgacgatgttcccaccacacctgagagt
caaggaagggaatctcctcctcatttccatgcctccccttccaaaaccagcaacagcact
gtagacgttccctcgtcaacagcctcgcccgcacacagtacacacgcctcccctggaaga
ggaggaagcccagtgtcaacaaagtccgcagaggcaccgggtggcacagagtcgccatct
gaaggcgtcgaacaagggaaagtcacagagcattcgacgccaccgagccggcccacctca
ctcccaacggaattgcagaaaccagaggaaagcatcgagaagagtggaggtcagacagca
ggtgctccagaggaggaaaagtcaaatgctgcagatcaacaaacagcacctgcagaaact
aatcaaaaacaagaaaagattgaacaaaacatctccaaacttgaccaatcagaggacagc
acacacgaaagtcagccagtaacttcacagatctgcagttccctggagtggtctcagaga
aaggagattgtacaaagcttcactgcttctgcatcatctggatacgacctgccaagtgaa
acaacagaagactttgcaaacagtgtcaggtctccgtctgcaaccagcaaccctaagtta
cgctgggacttcttcgctccagcagaggaagcagagaaggatcgccgtggcaacgagaag
taccagcgcgagcaggagaagctgaaggaggagtgggagaaagctcagagggaggtggcc
gaagaggagaagaagtaccatgaggaggagcgtaggatactggaggagactgtggcgcct
ctgactccccgttcatcagccctgccctcccccagccgaggggagctctcctccacctcg
cagcctcaggacgccatcgtccgctcactcgccgactgggaacgcaagcaggaaatgttg
gaaaatcagtcgagaggaagtacagagagcgtggaatggaaacgaagagaaaacgacagg
accagtgacatcagcactgctgacgacagcatgaaaacaggcagaagctcggtgagccag
agcagcagtcaggtcgagatgttcggtcacagtctgcagaacggccaaaagcttccatcg
gtgccggccaaaacctcaactcccgtcaagaaacaacaagagctcaaagcagacagcaac
aagcccagccggccttcaggagaccgcaggagcagccccattgataataacatgggccgc
aactcatcaaagccccccgcagcatgtcctccacctccagacacagtgcctccagcaccc
aataggtccgtcagtgggaagaagctgtgttccagctgtgggcagccattagggaagggg
gcggcaatgattatagagaccctcagcctctacttccacattcattgctttaagtgcgga
gtgtgtaagggacagctaggcgacacgaccacggggacagacgtccgaattaggaacggc
ctcctcaactgccaccagtgctacatccgctcccgctcggccggacagccaaccacgttg
tga
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