Scomber japonicus (chub mackerel): 128362498
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Entry
128362498 CDS
T09718
Symbol
fbxo38
Name
(RefSeq) F-box only protein 38
KO
K10313
F-box protein 38
Organism
sjo
Scomber japonicus (chub mackerel)
Brite
KEGG Orthology (KO) [BR:
sjo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
sjo04121
]
128362498 (fbxo38)
Ubiquitin system [BR:
sjo04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
SCF complex
Target recognizing subunit (F-box)
128362498 (fbxo38)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
F-box
F-box-like
Motif
Other DBs
NCBI-GeneID:
128362498
NCBI-ProteinID:
XP_053179215
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All DBs
Position
8:complement(4826305..4848709)
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AA seq
1215 aa
AA seq
DB search
MGPRRKASKLQPFVGGGEGEAVPRTTEPKDYINELSHEVLCHIFRYLPMKDIMCMECLSR
KLREAVTLYLRVVKVVDLCAGRWWEYMPSGFTDSSFLLLLKKMPDLEQLYGLHPRYLERR
RVRGYEAFSIPGVLEALQFCPSLLGVETSHLELVEAIWNYMPQVHILGKFRNRNGAFPIP
AENKLTIPITAKIQTLHLVGVNVPEIPCVSMLRHLYLKWVRLTKPQPFKDFLCVSLRTFV
MRNCAGPTNSLKYVPLVTGLASARNLEQLELVRVPFLGGLIQHVVEDSWRSGGFRNLHTI
VFGACKNALEVDLGYLVITAARRLHELRIQPSLTKDGVFSALKMAELEFPQFETLHLGYV
DEFLLQCKMSHSELVKYGLADVIENPGIITDIGIKVVNEVFTNIKYLLIYNCPHLHNPHH
WITDQSRWSRLVDLTLVRCHAIKLESFSQFIELLPSLEFICLDQMFREPPKGCARVGLSA
GTGIGVSSALVSNQNSNNDNDNNNNHHHNNNEANLPPAPPPVNNINNNNQRPQQQQEHNV
EVNGMEEEEEEEEEEVILEEENMEAEPQIDLKGGGGEVKVEKVDVAPGPSRPAETPQHPD
EEQAGPSGLVQQCRPAGAPLPKPPLVISDSDSEEEEGLVSRLMPASCSQRPASCTEGKGK
TPLRRSNNVAVSVALSADQMKAQVSESSCEKSCQVTSEQIKADMKAAVENSRRTSSKGVI
TEAGESSARPGPDSGTGRGGGTTGGSGGTGGTGGPGGGAAARTAVRPVTGCVGRVGPGTT
TSRQVGGCESVMAGSTTHRAPTTTDRATGTGRTNECTEGPSGTQAGDSCTKEAGVRPSSG
PVGVDCVDPRGAAVNHVPRRQEERQSAHAGYASAAFTGSQQGQARGEEFVPRRPMTRSCT
RMSSVSLVPETDLSRARPRIAVRRKRMADKSTSTSDPVTEDDHVQVLSLKSKNLVGITLT
NCGITDLVLKDCPKMMFIHATRCRVLKQLRVESAPIVNRFDYAQCKKLDMEQVLDQILRM
PPERNRIIYMRPMHQIDSVALERQLFQGPYPYHIAIVHEFSNPPNIRNKVRIRSWMDTIA
NISQELIKYEFFPEATRTEEDVKKYPKYPWGRDIYTLEGVVDGAPYSMITDFPWLRTLRA
ADPNSYARYDFEDDESTTIYAPRRKGQLSADICMETIGEEISEKRQSKRGVFQRVVVLFL
HHCDTPGEPVDDDYI
NT seq
3648 nt
NT seq
+upstream
nt +downstream
nt
atgggtccaaggagaaaggcctctaaactccagccttttgtgggcgggggggaaggggaa
gcggtccccagaaccacggagcccaaagactacatcaatgagctgtcccatgaagtcctc
tgtcatatattcaggtaccttcctatgaaggacataatgtgtatggagtgtctgtctaga
aagcttcgagaggctgtgactctgtacctccgagtggtcaaagtagtagatctgtgtgca
ggtcgctggtgggagtatatgccttcaggtttcacagacagcagctttctgctccttttg
aagaagatgccagatctggagcagctgtatggtctccaccctcgatacctggagaggaga
agagttcgaggttatgaggctttcagtatacctggagtcctggaggcactacagttctgt
cctagtctgctgggtgtggagacatcccatctggagctggtggaagccatatggaactac
atgccccaggttcacatactgggaaaattccgtaaccgtaacggggcatttcccattcct
gctgagaacaaactgaccatccccatcactgcaaagatccagactctgcatctagtgggt
gtgaacgtcccagagattccttgtgtgtccatgctgcgccacctttacctgaagtgggtc
cgtctcaccaaaccacagccatttaaggacttcctgtgcgtgagcctcagaacctttgtc
atgcggaactgcgctgggccgaccaactccctcaaatacgttcccctggtcaccggttta
gcgtcagcccggaacctggaacagctggagctggtgagagttcccttcctgggagggctg
atccaacatgtggtagaagacagctggaggtcaggaggatttcgtaaccttcacaccatt
gtgtttggagcctgtaagaatgctctggaggtggacctgggctaccttgtgatcactgct
gctcgcaggcttcatgagctgcgtatccagccttcactgactaaagatggagtcttttca
gctctcaagatggctgaactagagtttcctcagtttgagactcttcatctgggatacgtg
gacgagttcctgttgcaatgtaagatgagtcattcagagctggtgaaatacggtttggca
gatgtcattgagaacccgggcatcatcactgatattggcataaaggtggtgaacgaggtg
ttcaccaacattaagtacctgctcatctacaactgtcctcacctgcacaaccctcatcac
tggatcacagatcagtccagatggagccgccttgttgatctcactctggtccgctgtcat
gctatcaaactggaatccttctcccagttcatagagttactgcccagtctggagttcatc
tgtctagaccagatgtttagagaaccacccaagggctgtgccagggtgggcctgagtgca
gggactggtatcggtgtgtcctcagcactggtcagcaaccagaactccaacaatgacaac
gacaacaacaacaaccaccaccacaacaataatgaggccaacctgcctcctgctcctcca
cctgtaaacaacatcaacaacaacaaccaaagaccacagcaacaacaggagcacaatgtg
gaggtaaatgggatggaggaggaggaggaagaagaggaggaggaggtgatcttggaggaa
gaaaacatggaagctgagcctcagatagatctgaaaggaggaggaggggaggtgaaagtg
gagaaagttgacgtggctccaggacccagtcgtcctgctgaaacaccgcaacaccctgat
gaggagcaggcaggtcccagtggtttagtccagcagtgcagaccagctggtgcccctctt
cctaagcccccactggtcatctcagactcagacagcgaggaggaggaaggcctcgtttca
agactgatgccagcttcctgttctcagcggccagcttcctgtacagaaggcaaaggaaag
actcctctccgtcgaagcaacaatgtggctgtgtcagtggcgttatcagctgatcagatg
aaggctcaggtgtcagagagcagctgcgagaagagctgtcaggtgaccagtgaacagatc
aaggcagacatgaaggctgctgttgagaacagcaggaggactagcagtaaaggagttata
actgaggctggagagagcagcgcaaggccggggcctgacagcgggacaggacggggcggt
gggactactggtgggtctggtgggactggtggaactggtgggcctggtggtggggctgca
gcaaggaccgcagtgaggccagtgactgggtgtgttggcagggttggacctggtacaact
acatccagacaagtaggtggatgtgagagtgtgatggcggggagcaccacccacagagca
cccacaactaccgacagagccacaggaacaggcaggactaatgagtgcactgagggaccc
tctggaacacaagctggggatagctgcacaaaggaagccggggtgagaccgagctctggt
cctgttggtgtggactgtgtggatcctagaggtgctgctgtaaatcatgttcccaggaga
caggaagagagacagtctgcccatgctggatatgcctctgctgcctttacaggctctcag
cagggtcaggctagaggagaggagtttgttccaaggcgacctatgacccgatcttgcacc
cgtatgtcctctgtgtccctggtacctgagacagatctctcaagagccaggcctcgaata
gcagtgaggaggaaacgtatggcagacaaatcaaccagcacatcggacccggtcaccgag
gacgaccatgtacaggtgttatctctgaagagtaagaacctggtgggcatcacgctgacc
aactgtggaatcactgacctggtcctcaaagactgccccaagatgatgttcattcatgcc
accagatgtcgagttttgaagcagctgcgagttgaaagtgctcccatagtgaacaggttt
gattacgctcagtgtaagaagctggacatggaacaggtcctggatcagatactgagaatg
cctccagagaggaaccgcatcatctacatgcgcccaatgcaccagattgactcagtagcg
ttggaacgtcagctcttccagggcccctacccttatcatatagctatagtgcacgagttc
agcaaccctccaaatatacgcaacaaggtccgcattcgcagctggatggacacgatagcc
aacatcagccaggagttaatcaagtatgagttcttcccagaggccaccaggacagaagag
gatgtgaagaagtatcccaaatatccctgggggcgggacatttatacactggagggagtg
gtggatggtgccccctacagcatgataacagacttcccctggctgaggactctgagagca
gccgatcctaacagctacgcccgctatgactttgaggacgatgaaagcaccaccatctat
gctccacgacgtaaaggccagctgtcagctgacatctgcatggagactattggggaggag
atctcagagaaacgacagagcaaaagaggagtattccagagagtggtggtcctcttcctc
catcactgtgatacaccaggagaacctgtggatgatgactacatctag
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