Scomber japonicus (chub mackerel): 128362528
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Entry
128362528 CDS
T09718
Symbol
rbmx
Name
(RefSeq) RNA-binding motif protein, X chromosome isoform X1
KO
K12885
heterogeneous nuclear ribonucleoprotein G
Organism
sjo
Scomber japonicus (chub mackerel)
Pathway
sjo03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
sjo00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
128362528 (rbmx)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
sjo03041
]
128362528 (rbmx)
Spliceosome [BR:
sjo03041
]
Common components
Common spliceosomal components
hnRNP proteins
128362528 (rbmx)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
RBM1CTR
RRM_7
Nup35_RRM_2
PHM7_cyt
RRM_PARP14_3
RRM_5
RBD_DEAH11
DUF7373
RRM_occluded
Motif
Other DBs
NCBI-GeneID:
128362528
NCBI-ProteinID:
XP_053179271
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All DBs
Position
8:20507110..20513094
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AA seq
395 aa
AA seq
DB search
MAEADRPGKLFIGGLNTETTEKALEQYFSKYGRIVEVLLMKDRETNKSRGFAFVTFESPA
DAKDAAREMNGKSLDGKPIKVEQATKPQFESAGRRGPPPVHSRSRGPPRGPRGSRGGPGG
IRGPPSRDYYDNSGNVEPFFKGMSSRGPPPMKRGPPVRNGGPPPKRSAPSGPMSRRKSPM
SRDRDPYGPPPPRRDSMMSRRDDYPSPRDDHYSSKDSYSSRDYNSRDSRDYGPPPRDYSY
REYSNSSSRDDYGSMSRGYSERDGYSGGREPRSYVDRPSGGSYRDSYDGYGNSRSAPPSR
GPPPSYGGSSGSSRYDDYGSSSRDGYGSRDSYPSSRSDPYPPSRGERMGRQDRGPAPPVE
RGYPPRDSYSSSSRGGPRGGRGSNRADRGMARSRY
NT seq
1188 nt
NT seq
+upstream
nt +downstream
nt
atggcagaggcagaccgaccagggaagctcttcatcggcggactgaacaccgagaccacc
gagaaggccctggagcagtacttcagcaaatatggcaggattgtggaagttcttttgatg
aaagaccgtgaaacaaacaaatcaagaggcttcgcttttgtgacttttgaaagtccagct
gatgccaaggatgcagcgcgcgagatgaatggaaagtccctggatggcaagcctatcaaa
gtggagcaagctaccaaacctcagtttgagagtgctggcaggcgaggaccaccacccgta
cactctcgcagtcgtggtccacccagaggcccccgcgggtccaggggaggtcctggtggt
ataagaggcccaccatccagagactactatgataattcagggaatgtagaacccttcttt
aaagggatgtcatccagaggtccccctccaatgaagagaggacccccagttcgtaacgga
ggtcccccacccaagaggtcagccccatctggtcccatgagcagacgtaagtccccaatg
tcaagggacagggatccctatggtccaccccctcctcgcagagactccatgatgtccaga
agggatgattatccatcaccaagagatgaccattattcctcaaaagatagctactccagt
cgggattataactccagagattcgcgggactatggacctcctcccagagattattcatac
agagaatactcaaattccagttcccgagatgactatggatcaatgtcaaggggatacagt
gagcgtgatgggtacagcggaggccgggaaccacgaagctacgtagaccgtccaagtggt
ggctcctacagagattcatatgatggttacggtaactctcgcagcgccccaccatcaagg
ggtcccccaccatcctatggtgggagcagtggaagcagtcgttacgatgactatggcagc
agttcccgggatggctatggcagtcgtgacagttaccccagcagtcggagtgacccatat
ccacctagccgtggtgagcgaatgggcaggcaggataggggcccagctccccctgtcgag
agaggctaccctcctcgtgattcatacagcagctcaagtcgtggtgggccacgtggtggc
cgtggcagcaatcgggccgatagaggaatggctcgcagcagatactaa
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