Scomber japonicus (chub mackerel): 128362602
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Entry
128362602 CDS
T09718
Symbol
prom1a
Name
(RefSeq) prominin-1-A
KO
K06532
prominin 1
Organism
sjo
Scomber japonicus (chub mackerel)
Brite
KEGG Orthology (KO) [BR:
sjo00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
sjo04147
]
128362602 (prom1a)
04090 CD molecules [BR:
sjo04090
]
128362602 (prom1a)
Exosome [BR:
sjo04147
]
Exosomal proteins
Exosomal proteins of colorectal cancer cells
128362602 (prom1a)
CD molecules [BR:
sjo04090
]
Proteins
128362602 (prom1a)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Prominin
Tweety
DUF3587
Cyt_bd_oxida_II
Motif
Other DBs
NCBI-GeneID:
128362602
NCBI-ProteinID:
XP_053179388
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Position
8:26728591..26799920
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AA seq
830 aa
AA seq
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MWKTGILLLLLRVLLASGELQQETESRRLPPPGKLDFGYVPAGVYETLAHYEPGPIGILF
HMVHTYLYIVQPNVFPQDLLVKLAKDRFGAIQTEYQKAIYYEIGFLVCAAVGLLFAILMP
IIGLFFCLCRCCDNCGGEMHQRQRKNADCRRGLLGTLLFSTSLVITIGVLCAYAANQNLS
SQVKNIRRLVNSNMRDLQTFANDTPMQIDYLISQYATAKNKVIYDLDNIGPLLGGRIHDQ
LDKEVHPALDKVLNMAGAMRETKEALENVSVSLEVLQEGTGKLNFNLSLVRISINRTLND
PGCHDEDSDATTAQLCRNIRQSLSQLQISANFTRLPKVTTQLEKMNNVLKTDLSTIVQRG
HSSLNNTPSMVTEQTRSVVENVQSLVDDIGSNISSFSKAFPVQSCLSNFTIFISHAHAKI
EDYYPEIDQMDFYRWIGCIALCCMVVLVLAFNYLGLLCGTLGYDKHASPTTRGCISNTGG
TMLMAGVGFSFIFSWVLMGVVTVIFLTGGNLEKLLCEPFQSKELFKVVDTPYLVNSEWKN
FIPGYMYNDSDLELTSESLYSTCKENKGIYSAMRLDKVFNISSFLNTTVFTKDMVSQLDS
VKIDLRAIILLEAEGKQNLLDFSEAGLSEINYADYLEEVNKGITVVDLLSFARELEAQTD
LMPRGPLQSALKGYVGTLRQIHSQQIIPMEQAMSALNQSMRFLERTASDLPNKVLAVLEA
IEIAQYLISQNATHLIKQETEKYTATLVGYFHQYVEWVRTSLAMEVAPCKPFSNMVDTAE
IIACSFLIDSMNTFWMGLGCSTLFLLPSVILAVKLAKFYRRMDTEDVYDE
NT seq
2493 nt
NT seq
+upstream
nt +downstream
nt
atgtggaagacagggatcctcctgctcctgcttcgggtgctcctggcgtccggcgaactc
cagcaagagacggaatcgcggagactcccaccgccgggaaagttggatttcggttatgtg
cctgcgggagtttacgagacactggcccactacgaacctggaccgattgggattctgttt
cacatggtgcacacgtatctgtacatcgtgcaacccaacgttttccctcaagatcttctt
gtcaaactggcgaaggacaggtttggagccattcagacagaatatcaaaaggccatctac
tacgagataggcttccttgtatgtgcagcggttggcctgctgttcgccatcctgatgccc
ataatcggactcttcttctgcttgtgccgctgctgtgataactgcggcggggagatgcac
caacggcagaggaagaacgcagactgtcggcgtggcctgctgggaacgctgctcttctcc
acctcactggtcatcacgattggagtgctgtgtgcgtatgctgccaaccagaacctgagc
tcacaagtgaagaacatacggagactggtcaacagcaacatgagggacctgcaaaccttc
gctaatgacacaccaatgcaaattgattacctaatatcccaatacgccacagccaagaac
aaagtcatctatgacctagataatattggtccgttattgggtggaaggatacacgatcag
ttggataaggaggtccaccctgccctggacaaagtgctcaatatggctggagccatgcga
gaaaccaaggaagccctggagaatgttagtgtttctctcgaagtcctccaggaaggaaca
ggaaaactcaattttaacctgagcctggtccggatcagtattaaccgcacactaaacgac
cccggctgtcatgacgaggattcagacgccacaactgcccagctgtgccgcaacatccgc
cagtcactgtcccagctgcagatcagcgccaacttcacacggctacccaaagtcacgact
cagctggagaagatgaacaatgtattgaaaacagacctcagcactattgtccagaggggt
cactcctctttgaacaacacaccaagcatggtgactgaacagaccaggagtgtcgtggag
aatgtgcagagtctggtggacgacattggcagtaacatcagcagcttttccaaggcgttc
ccggtgcagagctgcctgtccaacttcactatcttcatcagccatgctcacgccaagatt
gaggactactatcctgaaattgaccaaatggacttctacaggtggattggctgtatcgct
ttgtgctgcatggtggtcctggtcctggccttcaactacctgggcctgctgtgtggcacc
cttggatatgacaagcacgcctcgcctacaacacggggctgcatctctaacacaggagga
acgatgctcatggctggtgttggattcagcttcatcttctcctgggtgttgatgggagtg
gtgaccgtcatcttcctgactggaggaaacttagagaaacttctctgtgaacctttccag
tctaaagaactctttaaggttgtggacacgccatatctggtcaactcagagtggaagaac
ttcatccctggctacatgtacaacgactctgacctcgagctgacttcggagagtttgtac
agtacttgcaaagaaaacaaaggcatctattccgccatgcgtctggacaaagtcttcaac
atctcctctttcctgaacactacagtgtttactaaggatatggtgagtcagctggatagc
gtgaagatcgacctgagggcaataatcttgttagaggcggaggggaaacagaacctgctg
gatttctccgaagcaggactgtcagaaatcaactatgccgactacctggaagaggttaac
aaaggaatcactgtggtggacctgctctcatttgccagagagctggaggcccagacggac
ctcatgccgagaggccctctgcagtctgctctgaaaggctatgtcggcactctgcggcag
atccacagccaacagatcatccccatggagcaggccatgagcgcattgaaccagagtatg
agattcctggagagaacagcgtcagacctgccgaacaaagtcttagcagttcttgaggcc
attgaaatcgcacaatatctcatctcccagaatgctacacatttaatcaaacaggaaaca
gaaaaatacacagcgaccctcgttggctacttccatcaatacgtagaatgggtcagaaca
tctctggccatggaggtagcaccatgcaagcccttcagcaacatggtggacacagcggag
atcatagcttgcagtttcctgatcgactctatgaacactttctggatgggtctgggctgc
agcaccctcttcctgctcccaagtgttatccttgcagtgaaattagccaagttctaccgc
aggatggacacagaggatgtttacgacgagtga
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