Scomber japonicus (chub mackerel): 128362810
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Entry
128362810 CDS
T09718
Name
(RefSeq) integrin alpha-6-like
KO
K06485
integrin alpha 6
Organism
sjo
Scomber japonicus (chub mackerel)
Pathway
sjo04382
Cornified envelope formation
sjo04510
Focal adhesion
sjo04512
ECM-receptor interaction
sjo04514
Cell adhesion molecule (CAM) interaction
sjo04518
Integrin signaling
sjo04810
Regulation of actin cytoskeleton
sjo04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
sjo00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
128362810
04514 Cell adhesion molecule (CAM) interaction
128362810
04518 Integrin signaling
128362810
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
128362810
09142 Cell motility
04820 Cytoskeleton in muscle cells
128362810
04810 Regulation of actin cytoskeleton
128362810
09150 Organismal Systems
09158 Development and regeneration
04382 Cornified envelope formation
128362810
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
sjo04147
]
128362810
04515 Cell adhesion molecules [BR:
sjo04515
]
128362810
04090 CD molecules [BR:
sjo04090
]
128362810
Exosome [BR:
sjo04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
128362810
Exosomal proteins of breast milk
128362810
Cell adhesion molecules [BR:
sjo04515
]
Integrins
Integrin alpha subunits
128362810
CD molecules [BR:
sjo04090
]
Proteins
128362810
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Integrin_A_Ig_3
Integrin_A_Ig_2
Integrin_A_Ig_1
FG-GAP
FG-GAP_3
Motif
Other DBs
NCBI-GeneID:
128362810
NCBI-ProteinID:
XP_053179637
LinkDB
All DBs
Position
8:21447543..21458534
Genome browser
AA seq
958 aa
AA seq
DB search
MEFLESNGINGQWMGVRVTSQGPGKNVMTCAHRYQQWSPSPGPYNPRLVTGQCYLLGDDL
QVGKEDRTWRRVVCDSEHLTRRSMNHEWFAYCQQGHGASFAKDNTSLLFGAPGAYLWKGI
VRMEPLENLGIFSEYARETGNIDTLNTKLIPLKRDSYLGFSIDSGMALLRKGELTIVSGA
PRGGYSGQVTFIKVDPAALRSLSVELVLSGPGLASSFGYAVAVVDFNGDGWEDLAVGAPE
FFVKDGLVGGAVYIYINNKGKNWDKIVPVKLLGHKDSMFGLAVENIGDINQDGYEDIAVG
APYDGSGRVYLYYGSLDGINPEPAQVLSSESKKITLFGYSLSGNLDVDDNQYPDLAVGSL
SDSVFVYRARPVVSVSSYLKLTPNKTDISKEQCDKRTCDFSVQACFTYTAHLTSFNPKLI
LNYTFEIDAGRRKSGLPPRMRIMGSSQGKLELPRQGLKVCTDTKLRLLRNIKDRLHNILV
SVTWSLWNSSQTTRTSDNLTNLTPVLNLYQQKTTVSEIVLINKGCGSDNICQSNLELQYK
FCSRKTQNGQDVFKSLAREDGVAVITPSDGDIALEITVTNRNGDDAHQSHSVIRLPDTLR
YTSVVYDTASETHVTCSANENGTFVDCELGNPLHRDAEVTFYVLMSTNSISLSTKEVNVT
LQLETTSVQTIPPVEALAKVIFELNLQIYGQARPSQVSLGENVQGESAIETVDEIGAVVQ
YEFKVTNLGRSLKSFANASLNIYWPKENSVGKWLLYLTQISNEGVQSVPCSPVNEINPLK
HVKGWHDPSRKRREAELEALSTDDFTFLPTRRKYKTLTCSDGLKCVEIRCPLVGLDSSAL
IILHSRLWNSTFTEDYSSLNYLDIVVDAALDLTNSPENIGLKSEKPGTKVRLTVFLKRKT
KYFTKVAWWIIFLTVIVGLLLLAMLGFLLWKRGCINCHTNNKIPLHDGDPKETTPLKG
NT seq
2877 nt
NT seq
+upstream
nt +downstream
nt
atggagttccttgagagtaatggcataaatggccagtggatgggagttagagtgacaagc
cagggtcctggtaaaaatgtaatgacctgtgctcatcgctaccagcagtggagtccaagc
ccaggcccttacaaccctcgccttgttacgggtcagtgctacctcttaggagatgacctg
caggtcgggaaggaagacaggacgtggaggagggtagtttgtgattctgaacacttaacc
agacgttcaatgaaccacgagtggtttgcatactgccagcagggtcatggagcatcattt
gcaaaagacaacacatctttgttatttggagcaccaggcgcttacctgtggaaagggatc
gtacggatggagcccctggagaacctgggcatcttcagcgaatacgctcgtgaaactggg
aatatagacacattgaacacaaaactcatacctctaaagagagacagctacctaggattt
tccattgactcaggaatggccctcctcaggaagggtgagctgacaattgtgtcaggggca
cccagaggaggctacagcggccaagtgacatttattaaggtggatccagcggcactgaga
agtttatctgtagagttagtcctctctggcccgggcctggcctcctcctttggctatgct
gtggcagtggtggatttcaatggtgacgggtgggaggaccttgcagtaggagcacccgag
ttctttgttaaagacggtttggtcggaggggcagtctatatctacataaacaacaaagga
aaaaactgggacaagattgtacccgtcaaacttcttggacataaagattccatgtttggc
cttgcagtggaaaacataggagacatcaatcaagacggatatgaagatattgctgtggga
gcaccttatgatggctctggtcgagtatacctctactatggctcattagatggcatcaac
ccagagccagcacaggtactttcatcagaatccaaaaaaatcactttgtttggatattct
ctgtctggcaatttggacgtggatgacaatcagtaccctgatttggctgttgggtcgctc
tcagattctgtatttgtttacagagcgaggccagtggtcagtgtcagcagctatctaaag
ctaacaccaaataaaacagacatctcaaaggaacaatgtgataaacgcacgtgtgatttt
tcagtgcaggcgtgctttacctacacagcacatctgacgtccttcaaccctaaactgata
ctcaattacacatttgagattgatgctgggaggagaaaatcaggacttcctcccagaatg
cgcataatgggttcatctcaaggaaaactggagctacctcgccaggggttgaaagtctgc
actgataccaagctccgccttctgcgaaatattaaagacaggctgcacaatatccttgtt
tctgtaacctggtctctatggaactccagtcaaacgacaaggacaagtgataatctgacc
aacctcacacctgtccttaacctctaccagcagaaaacaactgtctcagagattgtctta
ataaacaagggctgtggcagcgacaacatttgccaaagtaacctggagttacagtacaag
ttctgttccaggaaaacacaaaatggtcaagatgttttcaaatcattggccagagaggat
ggtgttgcagtcatcactccctctgatggagacatagccttggagatcactgtgactaac
aggaacggagatgacgcacaccagagtcactcagtcatcaggctcccagatactcttcgc
tacacctctgttgtctatgatacagcatcagaaacacatgtgacatgttcagccaatgaa
aatggaacatttgtagactgcgaactgggaaacccactccatagagatgctgaagttaca
ttttatgtcctcatgtcaacaaacagtatctcactgagtacaaaagaggtcaacgtcacc
ctgcaacttgaaacaacaagtgtgcagacaataccaccagtcgaggcattagccaaagtt
atttttgaactgaatctgcaaatatatggtcaagccaggccctctcaagtatcacttggt
gaaaatgtgcaaggtgaaagtgccatagaaacagttgatgaaattggagctgtggttcaa
tatgaatttaaggtaacaaatttgggcagatcactgaaatcttttgccaatgcatcactt
aatatttattggccaaaggagaattctgtaggaaaatggctactttacttgactcagatc
agcaatgaaggggtgcagtctgtcccctgctcacctgtaaatgagatcaatccacttaaa
catgtaaagggctggcatgacccttcaaggaaaagacgtgaagctgagcttgaagccctc
tctactgatgatttcacatttctgccgacaagaagaaaatacaaaaccttgacctgctca
gatggactgaagtgtgtggagatacgctgccctctggtgggccttgacagtagcgcactg
attattctgcattctcgcctctggaattctacttttacagaggattacagctctttgaac
tacctggacattgttgtggatgctgctctcgacttaacaaactctccagagaatatcgga
cttaaatcagagaagcctgggacaaaggtaagactgactgtgttcctcaagagaaaaact
aaatacttcaccaaagttgcctggtggataatcttcctgacagtcattgtgggactcctg
ttattggcaatgcttggcttcttgttgtggaagagaggatgcatcaactgtcacactaat
aacaagattcctttacatgacggagatccaaaggagactactcctctgaaaggctaa
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integrated database retrieval system