Scomber japonicus (chub mackerel): 128362887
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Entry
128362887 CDS
T09718
Name
(RefSeq) cytoplasmic polyadenylation element-binding protein 4-like isoform X1
KO
K02602
cytoplasmic polyadenylation element-binding protein
Organism
sjo
Scomber japonicus (chub mackerel)
Pathway
sjo04114
Oocyte meiosis
sjo04914
Progesterone-mediated oocyte maturation
Brite
KEGG Orthology (KO) [BR:
sjo00001
]
09140 Cellular Processes
09143 Cell growth and death
04114 Oocyte meiosis
128362887
09150 Organismal Systems
09152 Endocrine system
04914 Progesterone-mediated oocyte maturation
128362887
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
sjo03019
]
128362887
Messenger RNA biogenesis [BR:
sjo03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
eIF4F and regulatory proteins
128362887
Factors involved in mRNA localization
Trans-acting binding proteins
128362887
mRNA cycle factors
P-body specific factors
128362887
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_7
CEBP_ZZ
RRM_1
zf-U1
Motif
Other DBs
NCBI-GeneID:
128362887
NCBI-ProteinID:
XP_053179717
LinkDB
All DBs
Position
8:11796352..11807357
Genome browser
AA seq
747 aa
AA seq
DB search
MGDYGFGVLVKNSSGNKSAFPVRIPPHLQPQHPHHPSNPPSPPSFVNNTCSTNGGSAWLF
PAVAQHSNMQDDILESDKSKALDLQDMQEKSQVQAQPQALSPGQQEAGGGLGELEGALPE
DGSMEKGSLESSGGKEKLRMESPVLSGFDYQDSLGMGTSCAQSTSSSSSLTSFNNWSPAV
PSTQSPVVGDDVGGFFGPAGSNANGPPLLFQNFSHHAGPGFGAGGSFSPQIGPVSQHHPP
TPHPQHYHPHGQGVPQQHRRSPASPHPPQPSFPPHAHRTGGFPQLPHLAPAQSKPPSPWG
SYQSPSTPTSTSWSPGGYGGWGGTQGVRDYRRGVGGGMTGLNSISPLKKSFPNNQVPSQK
FPRNSSGFNHKGWVEDSMSRCDSVYPFQQERTRSFDGFSMHSLENSLIDIMRAEQDSLKG
RYSFSHQGGDGPLPMNARSYGRRRGHSSLFPMEDERSFGEDESGDQGLAGLGSAHCFPHL
NGERVERYSRKVFVGGLPPDIDEDEITASFRRFGHLFVDWPHKAESKSYFPPKGYAFLLF
QDESSVQALIDACIQEDGKLYLCVSSPTIKDKPVQIRPWNLNDSDFVMDGSQPLDPRKTI
FVGGVPRPLRAVELAMIMDRLYGGVCYAGIDTDPELKYPKGAGRVAFSNQQSYIAAISAR
FVQLQHGEIDKRVEVKPYVLDDQLCDECQGTRCGGKFAPFFCANVTCLQYYCEYCWAAIH
SRAGREFHKPLVKEGGDRPRHISFRWN
NT seq
2244 nt
NT seq
+upstream
nt +downstream
nt
atgggggactacgggtttggagttctggtgaagaacagcagcggtaacaaatctgctttc
cctgtaaggatccctcctcacctccaaccccagcaccctcaccacccctccaaccccccc
agccccccctcctttgtaaacaacacctgctccaccaatgggggcagtgcttggctgttc
cctgccgtagcccaacacagtaacatgcaagatgacattctggagtcagacaagtccaag
gccttggacctccaggacatgcaagagaagtctcaggtccaggcccagcctcaggccctc
tctccaggccagcaagaggcaggcggaggcctaggggagctcgaaggagctctgccagaa
gacggttcaatggagaagggttctttggagagcagtggtggaaaagagaagctgaggatg
gagtccccagtgctaagcgggtttgactaccaggacagcctgggaatgggtacaagctgt
gcacagtccacctcctcttcctcctcgctgaccagtttcaacaactggtcacctgctgta
ccatccacccagtctccagtggtcggagacgatgttggaggattcttcggccctgctggc
tccaatgccaatggacctcccctgctgttccagaacttctcccaccatgctggacctggc
tttggagccggaggtagcttctccccacagattggaccagtctcccagcaccaccctccc
acacctcacccccaacactatcatcctcatggccagggggtcccacagcagcaccggcgc
tctccagctagccctcacccacctcagccctccttccctcctcatgcccatcgcactgga
ggattcccccagctgccccacctcgctcctgctcagagcaaacccccttcaccttgggga
agctaccagagcccctccacacccacatccacctcctggagccctggaggttatggtggc
tggggaggcacgcagggggttcgagattacaggcggggggtaggtggaggcatgacaggc
ctgaactcaatctccccactgaagaaatccttccccaacaaccaggttccctcccagaag
tttcccagaaatagctctggcttcaatcataaaggctgggtggaagacagcatgagccga
tgtgatagtgtctaccctttccagcaggagagaacacggtcctttgatggtttcagtatg
cactctctggagaactctctgattgacattatgagggctgagcaggattccttgaaagga
cgctacagcttctcccaccagggtggagacgggcctctacctatgaatgcgagaagttat
ggcagaagacgaggtcattcctctctgttccccatggaggatgagcgctcttttggagag
gacgaatcaggtgaccaggggcttgctggccttggttcagcccactgtttccctcatctc
aatggtgaacgtgtggagcgatattctcgcaaagtgtttgttggtgggctgcccccagat
atagatgaagatgagatcactgccagtttccgtcgtttcggtcacttgtttgtggactgg
cctcacaaagcagagagcaagtcctattttccaccaaaaggatatgcgttcctgctgttt
caagatgagagctctgttcaggctctgattgatgcttgcattcaagaagatggcaagctt
tacctgtgtgtttccagccccaccatcaaagacaagcctgtccagattcgaccctggaac
ctaaatgacagtgactttgttatggacgggtctcagccattggatccaagaaagaccatc
tttgtaggaggtgtccctcgtccccttcgcgcagtggagcttgccatgatcatggaccgt
ctgtacggtggagtgtgttacgctgggattgacacagaccctgagctcaagtatccaaaa
ggggcggggcgagtggccttctccaatcagcaaagctacattgcagccattagtgcccga
tttgttcaactgcagcacggggagattgataaacgggtggaagtgaagccatatgttctg
gacgaccagctgtgtgatgagtgtcagggcacccgctgtggggggaagtttgctcctttc
ttctgcgccaatgtgacctgtctgcaatactactgtgagtactgctgggcagccatccac
tcccgggccggtcgtgagttccataagccactggtgaaggagggcggggaccgaccacga
cacatctccttccgctggaactaa
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