Scomber japonicus (chub mackerel): 128362958
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Entry
128362958 CDS
T09718
Symbol
gabrp
Name
(RefSeq) gamma-aminobutyric acid receptor subunit pi
KO
K05189
gamma-aminobutyric acid receptor subunit pi
Organism
sjo
Scomber japonicus (chub mackerel)
Pathway
sjo04080
Neuroactive ligand-receptor interaction
sjo04082
Neuroactive ligand signaling
Brite
KEGG Orthology (KO) [BR:
sjo00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04080 Neuroactive ligand-receptor interaction
128362958 (gabrp)
04082 Neuroactive ligand signaling
128362958 (gabrp)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
sjo04040
]
128362958 (gabrp)
Ion channels [BR:
sjo04040
]
Ligand-gated channels
GABA-A
128362958 (gabrp)
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Gene cluster
GFIT
Motif
Pfam:
Neur_chan_LBD
Neur_chan_memb
Motif
Other DBs
NCBI-GeneID:
128362958
NCBI-ProteinID:
XP_053179808
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Position
8:11365254..11369313
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AA seq
450 aa
AA seq
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MPVQLHTVLILCLTCTHGGCMFPSHNWGEWNDSQLQPTIQKLMKGYNRYLRPNFNEGPVE
IGMSLDIASIDAISEINMDYTATIFLRQRWRDSRLVFPGNESVSVDGRLVSLLWIPDTFI
PDSKRSFLHDVTVENRLIRIFSNGTVLYALRITATIACNMDLTKYPMDKQVCTLQLESWG
YNLQDVVFYWTRGNDSVKGLDILRLAQYSVESYYTSVSQAVYETGKYPKLVLHFTLRRNV
LFFILETYVPSVLLVVLSWVSFWISQSSVPARTCIGVTTVLTMTTLMMGARTSLPNANCF
IKAIDVYLGICFTFIFGALLEYACAHFYTMQHHTIEDIHRALLRDLHESNGNGSIPMTRS
TQPNHSVEISSTAEEPVEQSLNSDTKNNAGSKENMPGQGCGLSSVKDASRRAASIFVVEN
PHNIDRHARTVFPTAFLFVNILYWLYYLFL
NT seq
1353 nt
NT seq
+upstream
nt +downstream
nt
atgcctgtccagctgcacactgtactgatcctctgcctgacctgcacacatggtggttgt
atgttcccaagccataactggggagagtggaatgactctcagcttcagccaacaattcag
aagctgatgaaaggatacaaccgctacctcaggcccaattttaatgagggtcctgtggaa
attggaatgagtcttgacattgccagcatcgatgccatctccgaaatcaatatggactat
actgcaaccatctttctccgtcagcggtggcgtgattccaggctggtgttcccggggaat
gagagcgtgagtgtggatggacgccttgtgtcactactctggatccctgacacgttcatc
cccgactccaagcgctccttcctgcacgatgtcacagtggaaaaccgtctcatacgtatc
ttcagcaatggaactgttctttatgctcttcgtatcacagctacaattgcctgcaacatg
gacctgaccaagtaccccatggataaacaggtgtgcaccctgcagctggagagctgggga
tacaatctgcaggatgtggtgttttactggaccagagggaatgattcagtgaagggtctg
gatatactgcggctggctcagtacagtgttgagagctactatacatcagtatcacaggct
gtgtatgagacaggaaagtaccctaagctggtgctgcattttactctgcgtagaaatgta
ttgttcttcatcttggagacgtatgttccctccgttctgctggtggttctctcctgggtc
tctttctggatcagccagtcctccgtaccagccaggacctgtatcggggtgactacagta
ttgacaatgaccactctgatgatgggggcccgcacctcccttcccaatgccaactgcttc
attaaggccatagatgtttacctgggcatctgcttcaccttcatctttggtgcactgctg
gagtatgcctgtgctcacttctacaccatgcagcaccacaccatagaggatatacacagg
gctcttttgagggatttacacgaatccaatggcaacggctccatccctatgacgaggtcc
acccaaccaaaccactctgtggagatcagctccactgcagaggagcctgtggagcagtca
ctaaacagtgacacaaagaacaatgctggatcaaaggagaacatgccaggacagggctgt
ggcctgtcatcagtgaaggatgcatcacgtagagctgcatccatcttcgttgtagaaaac
ccacacaacattgatcgccatgcccgcactgttttccccactgcattcctctttgtcaat
atcctctactggctttactatctcttcctctga
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