Scomber japonicus (chub mackerel): 128362983
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Entry
128362983 CDS
T09718
Name
(RefSeq) LOW QUALITY PROTEIN: TBC1 domain family member 9B
KO
K19951
TBC1 domain family member 8/9
Organism
sjo
Scomber japonicus (chub mackerel)
Brite
KEGG Orthology (KO) [BR:
sjo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
sjo04131
]
128362983
Membrane trafficking [BR:
sjo04131
]
Exocytosis
Small GTPases and associated proteins
Rab associated proteins
128362983
Endosome - Golgi transport
Rab GTPases and associated proteins
128362983
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RabGAP-TBC
GRAM
RabGap-TBC_2
EF-hand_1
EF-hand_6
EF-hand_7
EF-hand_8
EF-hand_5
Ric8
Motif
Other DBs
NCBI-GeneID:
128362983
NCBI-ProteinID:
XP_053179838
LinkDB
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Position
8:34561983..34582495
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AA seq
1225 aa
AA seq
DB search
MWIQPEEVLLAGALWVSERANPFFILQRRRGHGRGGGLSGLLVGTLDVVLDSSARVAPYR
ILLQTADSQIYWNIACGSNRKEITELWDWLESNLLQTISIFDSDEDVTTFVKGKICGLIA
EEKRLQPGEEPEDCGKFREAELKMRRLFRMPEEEKLVNYYSCSYWKGRVPRQGWLYLSVN
HLCFYSFLLGKEVTLVVQWTEVTQLEKNATLVFPESVRVSTRHEEHFFSMFLNINDTFKL
MEQLANIAMRQLLDNEAFAADRSLPKPCKTLRNVSALKRDLDARAKNERYRTMFRLTQDE
RLDGHTDCTLWTPFAKMHVVGQLFISNNYVCFNSREEELCQLIIPLREVSIVEKADSSSV
LPCPVSISTKNKMTFLFANLKDRDFLVQRISDFLQRTPDSCWGDTNPLSLIGSSVRSPGG
VGVSPPVSSVXCLFCVQAPTDSASRGRHYHAGLPTASRALLQLYQHDSEEDLGPRAMKEK
MKEEAWNIHFSEFGRGVCMYRTSRTRELILNGIPESLRGELWLLFSGAQNEMASHPGYYG
DLVEQAMGLCSLATEEIERDLHRSMPEHRAFQNETGIAALRRVLTAYAHRNPGIGYCQAM
NIVTSVLLLYSTEEEAFWLLVALCERMLPDYYNTRVVGALVDQGVFEDLTRAFLPLLYEH
MQELGVISTISLSWFLTLFLSVMPFDSAVLLVDCFFYEGIKVIFQVALAVLHDNMDALLS
CRDEGEAMTILGRYLDNVVNKQTVAPPIPHLHALLTSGDDPPPEIDVFDLIKSSYEKFGS
LRSDVIEQMRFKQRLKVIQSLEDTAKRSVVRAMMTESAFTIEELEELYCLFKAQHVTSCY
WGSSSSAAERHDPSLPYLEQYRIDPVQFTQLFTALAPWLCGGHTPSLAARLFRILDQNQD
GLVNFKEFITGLSGMYHGDMTEKLKLLFKLHLPPALCPEEAESALEATHFFTDDTTQESS
FLSNPDILGQQEVTSGEDGGGDSEEKKEEKVKDYRYYLRMWAKEKEPKRETIKDLPRMNQ
EQFIELCKTLYNMFSEEQQEQQLYHSIATVASLLLRIGEVGKKFNNGCKKTDSGQAPPPG
QAPPPTQVPPTAPAEQEGGGEGASGESQVCRALADAQLEPDEEARDDLSVSSYSVVSSGS
LQCEDIADDTVLIGGGEQRRGSVLDADWSITFEQVLASLLTEPPLVDYFEKKRDIEAKMA
ACKAQRVVERQISSASDHEVTQHSV
NT seq
3678 nt
NT seq
+upstream
nt +downstream
nt
atgtggatccaaccggaagaggtgctgcttgccggggctctctgggtgtctgaacgggcc
aatccgttcttcatcctgcagaggaggcggggccacggtcgcgggggggggctgtccggt
ctccttgtggggactctggatgtggtcttggactccagtgccagagttgctccgtacagg
attctgctgcagacggccgactctcagatctactggaacatcgcctgtggctccaacagg
aaggagatcacggagctctgggattggctggagtccaacctgctgcagaccatctccatc
ttcgacagcgatgaagacgtcacgaccttcgtcaaagggaagatctgcggcctcatcgcg
gaggagaagcggctgcagccgggggaggagccggaggactgcgggaagttccgtgaggcg
gagctgaagatgagacgcttgttccggatgcctgaagaagagaagctggtgaattattac
tcgtgcagctactggaagggacgagtgccgcggcagggatggctctacctgtccgtcaac
cacctctgcttctactcattcctattgggcaaggaagtgactctggtggtgcagtggacg
gaggtgacccagctggagaagaacgccacgctggtgttcccggagagcgtccgtgtcagc
acgcgtcacgaggagcatttcttctccatgttcctgaacatcaacgacacgttcaagctg
atggagcagctcgctaacatcgccatgcgccagctgctcgacaacgaggcgttcgccgcc
gaccgctcgctgcccaaaccctgcaagacgctcaggaacgtctctgcactcaagagggac
ttggacgcgcgggcgaagaacgagcgttaccggacgatgttccgcctgacgcaggacgag
cgtctggacggacacacggactgcacgctgtggacgccgttcgctaagatgcacgtcgtg
ggtcagctgttcatctccaacaactacgtctgcttcaacagcagagaagaagaactgtgt
cagctgatcatcccgctcagagaggtgtccatcgtggagaaggcggacagcagcagcgtc
ctgccgtgtcccgtctccatcagcaccaagaacaagatgaccttcctgttcgccaacctc
aaagaccgggacttcctggtgcagcggatctctgacttcctgcagaggacgcctgacagt
tgctggggcgacaccaacccgctgtctctgattggctcctcggtgcgtagcccaggtgga
gtaggcgtgtctccgcccgtttcctccgtctgatgtttgttttgtgttcaggcgccgacg
gactccgccagcagggggcgacattaccacgccggcctccccaccgccagccgggcgctg
ctgcagctctaccagcacgactcagaggaggacctgggcccccgagctatgaaggagaag
atgaaggaggaggcgtggaacatccatttctcagagttcggtcgaggtgtgtgtatgtac
cggacctccagaaccagagagctgatcctgaacgggatcccagagagcctgcgaggggag
ctgtggctgctgttctctggagcacagaacgagatggcgtcccaccctggttactatggc
gacctggtagagcaggccatggggctgtgctcattggctaccgaggagatcgagcgtgac
ctccaccgctcgatgcccgaacaccgagccttccagaacgagacgggcatcgctgctctg
cgccgggtcctcaccgcctacgctcaccgcaacccgggcatcgggtactgccaggcgatg
aacatcgtgacctcggtgctgctgctctattctacggaggaggaagcgttctggctgctg
gtggcgctgtgtgagcgcatgctgcccgactactacaacaccagggtcgtaggggctctg
gtggaccagggtgtgttcgaggacctgacccgggccttcctgcccctgctctatgaacac
atgcaggagctgggagtgatctccaccatcagcctgtcctggttcctcacgctcttcctc
tccgtcatgcccttcgactccgccgtgctgctggtcgactgcttcttctacgagggcatc
aaggtcatcttccaggtggcgctggccgtgctccatgacaacatggacgctctgctgtcc
tgcagagacgaaggagaagccatgaccatcctcggcaggtatctggataacgtagtgaac
aagcagaccgtggctcctccgatccctcaccttcacgctctgctgacgagcggcgacgac
ccgccaccggagatcgacgtgtttgacctcatcaagtcgtcctacgagaagttcggcagc
ttgcgctctgatgtcatcgagcagatgaggttcaagcagaggttaaaggtcatccagtct
ctggaggacacggccaaaaggagtgtggtgagggcgatgatgacggagtccgcgttcacc
atcgaggagctggaggagctgtactgtctctttaaggcgcagcatgtgaccagctgttac
tggggctccagcagctcggcggcggagcgtcacgacccgagcctgccgtacctggagcag
taccggatcgacccggtccagttcacccagctgttcaccgcgctcgccccctggctctgc
ggaggccacaccccctcgctggccgcacgcctcttcaggatcctggaccagaaccaggac
gggctggtcaacttcaaagagttcatcaccgggctcagtgggatgtatcacggagacatg
acggagaaactcaaactgctgttcaagctccacctgccaccagctttgtgtcccgaagag
gccgaatctgctctggaggctacacacttctttactgacgacacgacacaagaatcttcc
ttcctgtctaatccggacattttggggcagcaggaagtgacatcaggtgaggatggaggc
ggagacagtgaggagaagaaagaggagaaggtgaaggactacaggtactatctgaggatg
tgggccaaagagaaggaacccaagagagagaccatcaaagacctgcccaggatgaaccag
gagcagttcatagagctgtgtaagacgctgtacaacatgttcagtgaggagcagcaggag
cagcagctgtatcactccatcgccaccgtggccagtctgctgctgcggatcggagaggtc
ggcaagaagttcaacaacggctgcaagaagacggacagcggccaggccccgccccccgga
caggccccgccccctacacaggtcccgcccaccgccccggcggagcaggagggggggggc
gagggagcgtcgggggagtcccaggtgtgccgggcgctggccgacgcccagctggagccg
gacgaggaggccagagacgacctgtcagtgtcgtcgtactcggtggtgagctccggctcg
ctgcagtgcgaggacatcgccgacgacaccgtgctgattggaggcggcgagcagaggcgg
ggcagcgtgctggatgccgattggtcgatcacctttgagcaggttctggcgtcgctgctg
accgagccgccgctcgtcgactactttgagaaaaagagggacatcgaggccaagatggcc
gcctgtaaggctcagcgggtggtggagcgtcagattagctccgcctccgaccacgaagtc
acccagcactccgtctga
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