Scomber japonicus (chub mackerel): 128362989
Help
Entry
128362989 CDS
T09718
Name
(RefSeq) E3 ubiquitin-protein ligase RNF38-like
KO
K19041
E3 ubiquitin-protein ligase RNF38/44 [EC:
2.3.2.27
]
Organism
sjo
Scomber japonicus (chub mackerel)
Brite
KEGG Orthology (KO) [BR:
sjo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
sjo04121
]
128362989
Enzymes [BR:
sjo01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
128362989
Ubiquitin system [BR:
sjo04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
128362989
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-RING_2
zf-RING_11
zf-C3HC4_2
zf-rbx1
zf-C3HC4
zf-RING_5
zf-C3HC4_3
zf-ANAPC11
zf-RING_UBOX
VPS18_RING_C
Motif
Other DBs
NCBI-GeneID:
128362989
NCBI-ProteinID:
XP_053179844
LinkDB
All DBs
Position
8:complement(18744202..18755475)
Genome browser
AA seq
639 aa
AA seq
DB search
MDPPRTRSRSRSGFYHFGMNSSVGGNSSGNAVGNGSMMNASGGGVSYPQQSNAGWAPHHG
GRSYAESQQQQHTQGSYLSAGAQRHSSHGAHRHPGAGGVLHFHPDNVCSEDRDKMEDSPS
PKRQRLSQQSMLDLNSAPPSTPSSPIRPWELPPSRRPHPHYMPERCHTPVRNRRSPPMRR
QRGRRDRLTRHHHHHAHNNHHHYNGNNNHHHHPNAHHHHHHHHLHSHHGPSPGHQDENYR
HQAPPQGYPPYSQQPPRGPGPGPEERPSYHPPNPSPRPLHQSPNLSPRLLHPAAHPQHPH
PHPHPSQQQSSVVLDLHEQGSAPVSYPVSPPGAPPGLPPRSAPQQIPACSVVFSGQHYPV
CSVPPPVLQTCSVQHLPMPYPFPSLLSSDPAFLLPPPHLPHPPTHLSHHPPHLPQPGQFG
PYPTQQARSPLQRIENDVELLGEHLSLGAGLHYPPATHPALTPHSTQLHFLSHDPLPQEF
FGVSYPNFIPRRLPGRRYRSQQPLPPSPYHPSLLPYFLSMLPVQPTGPAISLELDVDDGE
VENYEALLNLAERLGEAKLRGLTKGDIEQLPSYRFNPNNHQSEQTLCVVCMSDFESRQLL
RVLPCSHEFHGKCVDKWLRANRTCPICRADASEVQRDSE
NT seq
1920 nt
NT seq
+upstream
nt +downstream
nt
atggaccccccgaggactcggtcgcggtctcggtctggcttctatcatttcggcatgaac
agcagcgttggaggcaacagtagcggtaacgcagtcggtaacgggagcatgatgaacgcc
agcggaggaggggtcagctacccgcagcagagcaacgccggctgggcgccgcaccacggt
ggccgcagctacgcggagagccagcagcagcagcacacccaggggagctacctgtccgca
ggggcgcagcgccactcatcgcacggagctcacagacaccccggggccggaggagtgcta
cattttcatccagataacgtttgcagcgaggatcgggacaaaatggaagacagcccaagc
ccgaaaaggcagcgtctttcccagcagtccatgttggatcttaactccgcccctccttct
accccttcctctcccattcgaccctgggagcttcctcccagtcgcagaccacacccccac
tacatgccagaaagatgccacacgcctgttcgcaaccgtcgcagccctccaatgagacgg
cagcgtggccggagagaccgtttgacccgccaccaccaccaccacgcacacaacaaccac
catcattacaacggcaacaacaaccaccatcaccacccaaacgcccaccatcaccaccat
caccaccacctacactcccatcacggcccgtcgccaggccaccaggatgagaactatcgt
caccaggctcctcctcagggctacccaccttacagccagcagcctcccagagggccaggg
cctgggcctgaagagcgccccagttaccatcccccaaacccctctccaaggccccttcat
cagtcaccaaacctttctcccaggctgctgcaccccgcagcacatccacagcacccccac
cctcaccctcacccatcccagcagcagagcagtgtggtgctggacctccacgagcagggt
tcagctccagtatcatatcctgtgtctcctcccggtgctccacctggcctgccacctcgc
tctgcccctcaacagatcccagcatgctcggtggtcttcagtggacaacactatcccgtc
tgcagcgtacctcctcctgtccttcagacttgttcggtgcagcacttacccatgccctac
ccatttccatctctgctgtccagcgacccggctttcctgcttcctcctcctcacctcccc
catccccccacacacctttcccaccatccacctcaccttccccagcctggacagtttgga
ccctacccgacacagcaggcccgatcgccgttacagaggatagagaatgatgtggagctg
cttggagagcacctgtctttgggtgctggtcttcactatccccctgccacccacccagcc
ctcaccccacactccacacagcttcacttcctctcccatgaccccctgccacaggagttc
ttcggagtgtcctatccaaatttcattcctcgacgtctcccggggcgacggtaccgctca
caacaaccactgccaccttcgccttaccaccccagcctcctgccttacttcctctcaatg
ctgccagtccagcccacaggtcctgcaatcagtctagagctggatgtagatgatggagaa
gtggaaaattatgaggccctcctgaacctcgctgagcgtctgggagaggccaaactccga
ggactgacgaagggagacattgaacagcttccctcctatcggttcaatcctaataaccat
cagtctgaacaaacactgtgtgtggtgtgtatgagtgattttgagtcccgccaactgctg
cgagttttgccgtgcagtcatgagttccatgggaagtgtgtcgacaagtggctgagggcc
aacaggacgtgtcccatttgtcgggcggacgcctctgaggtccagagagactcggagtga
DBGET
integrated database retrieval system
