Scomber japonicus (chub mackerel): 128362997
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Entry
128362997 CDS
T09718
Name
(RefSeq) neuronal acetylcholine receptor subunit alpha-3-like
KO
K04808
nicotinic acetylcholine receptor alpha-6
Organism
sjo
Scomber japonicus (chub mackerel)
Pathway
sjo04080
Neuroactive ligand-receptor interaction
sjo04082
Neuroactive ligand signaling
Brite
KEGG Orthology (KO) [BR:
sjo00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04080 Neuroactive ligand-receptor interaction
128362997
04082 Neuroactive ligand signaling
128362997
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
sjo04040
]
128362997
Ion channels [BR:
sjo04040
]
Ligand-gated channels
Acetylcholine (nicotinic)
128362997
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Neur_chan_memb
Neur_chan_LBD
Pyr4-TMTC
Red1
Motif
Other DBs
NCBI-GeneID:
128362997
NCBI-ProteinID:
XP_053179851
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Position
8:complement(18683399..18691984)
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AA seq
493 aa
AA seq
DB search
METNLWLRHVWNDYKLRWTPVEYDGIEFIRVPSNKIWRPDIVLYNNAVGDFLVEDKTKAL
LKFDGTITWVPPAIFKSSCPMDITYFPFDYQNCSMKFGSWTYDKAKIDLVLIGSKVNLKD
FWESGEWEIIDAPGYKHDIKYNCCEEIYPDITYSFYIRRLPLFYTINLIIPCLLISFLTV
LVFYLPSDCGEKVTLCISVLLSLTVFLLVITETIPSTSLVIPLIGEYLLFTMIFVTLSIV
ITVFVLNVHYRTPMTHTMPEWVRAVFLGVLPRVMLMRRPIDQGCSSSASITGGTGGAGGG
SSGGNKKRKNSLGAGSGTGSVSVGGITGGVPCPALDGGTGGGGATSAGGSMNCVEYGEMN
REMNRDMNRRCPYRGKEVPTPVPPPIVPPPPQAPQTQGPQESELPKVPRPLSAPSPVNAV
VAFSVVSPEIKQAIESVKYIAENMRTRNKAKEVEDDWKYVAMVIDRIFLWVFVTVCVLGT
LGLFLQPVINFLK
NT seq
1482 nt
NT seq
+upstream
nt +downstream
nt
atggaaaccaatctgtggctgagacatgtctggaatgactacaaactgagatggactcct
gttgaatacgatggcattgagttcatacgagttccatctaataagatttggaggccagac
attgttttgtacaacaatgctgtaggtgatttcttagtggaagacaagaccaaggctctg
ttgaagtttgatggcaccatcacctgggttcctccagctatttttaaatcctcctgcccg
atggacatcacctatttcccctttgactaccaaaactgctccatgaagtttggttcctgg
acctatgacaaggccaagattgacctggtgctcattggctcaaaggtgaacctgaaggac
ttctgggaaagtggagagtgggagatcattgatgcaccaggttacaagcacgatatcaag
tataactgctgtgaggagatctacccggacatcacctactccttctacatccgtcgcctg
ccactcttctacaccattaacctcatcatcccctgcctcctcatctccttcctcacagtg
ttggtcttctatcttccatctgactgtggggagaaggtcactctgtgtatctctgtcctt
ctctccctcactgtgttcttgctggtcatcactgagactatcccttcaacgtcacttgtc
atccctctgattggcgagtacctcctctttaccatgatttttgtcacgctcagtattgtc
atcactgtctttgtgctgaatgtccactaccgcacccccatgactcacacaatgccagag
tgggtgagggcagtgttccttggggtgctacccagggtgatgttgatgaggcggcctatc
gaccagggctgctcctcttctgccagtatcacaggaggcacaggaggagcaggaggaggg
agcagtggagggaacaagaagagaaagaacagtctcggggcaggaagtggaactggaagc
gtaagcgttggaggtatcactgggggtgtaccgtgtccagcgctggatggtggcacaggg
ggaggaggagccacctcagctggtggctccatgaactgtgtggagtatggtgaaatgaac
cgtgaaatgaaccgggatatgaacagaaggtgcccctacagaggcaaggaggtaccgact
cctgtccctcccccaattgtgccccctcctccccaggcaccccagacccaggggccacag
gagtcagagttgcccaaagtacctaggcccctaagtgccccatcaccggtgaatgctgtg
gttgccttctccgtggtgtcaccagagatcaaacaggccatcgagagcgtgaaatatatc
gctgagaacatgaggactcgcaacaaagccaaagaggtggaggatgactggaagtacgtc
gccatggtcatagataggatcttcctatgggtttttgtgacagtgtgtgtgctgggaact
ctgggactcttccttcagccagtcatcaacttcttaaaatga
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