Scomber japonicus (chub mackerel): 128363006
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Entry
128363006 CDS
T09718
Symbol
pcdh10b
Name
(RefSeq) protocadherin-10b
KO
K16499
protocadherin delta 2
Organism
sjo
Scomber japonicus (chub mackerel)
Brite
KEGG Orthology (KO) [BR:
sjo00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
sjo04515
]
128363006 (pcdh10b)
Cell adhesion molecules [BR:
sjo04515
]
Cadherins
Protocadherins
128363006 (pcdh10b)
BRITE hierarchy
Motif
Pfam:
Cadherin
Cadherin_2
Cadherin_C_2
Motif
Other DBs
NCBI-GeneID:
128363006
NCBI-ProteinID:
XP_053179865
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All DBs
Position
8:complement(4377250..4391780)
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AA seq
963 aa
AA seq
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MIVLLIVLCITDGVLSQIRYSVPEEADHGALVGNIAEDLGLDLTKLASRRFQVVPSSRTP
YLEVNLENGVLFVSEKIDREQICKQSASCQLNMEVFLENPLELFRVEIEVVDINDNPPSF
PETDITVEISESATPGTRFPLESAFDPDVGSNALRTYDITNNNYFYLDVQTQTDGNKFAE
LVLEKPLDREQQAAHRYVLTAVDGGQPPRTGTALLVVKVLDSNDNVPVFEQSVYTVSLSE
NAPVGTLVIQLNATDMDEGLNGEIVYSFSNHISSRVKDLFSIDPRTGRIEVRGEVDFEES
SLYQIFVQAKDLGPNAVPAHCKVLVKVTDLNDNAPEITFSTVTESVSEKAVPGTVIALLS
VTDLDAEENGQIQVEILGDVPFKLKSSFRNYFTIVTDGPLNREQADSYSVTVVARDKGTP
SLATSKSIRVQVSDENDNAPTFTQTIYDVYVTENNVPGAYIHAVTALDQDMGQNALISYS
ILECDIQGMSVKTYVSINEETGYLYALRSFDYEQLKDFTFMVQAKDAGNPELSSNATVKV
IIVDQNDNAPVVLAPLGKNGTAKEPLPRSAEPGYLVTRIVAMDADDGENARLSYSIQRGN
ENGMFRMDWRTGELRTARRVSAKRDPHQLYDLLIEVRDHGQPPLSSSASVLVMLVDSVAE
GRGGGDRGGATKAKDGTLDLTLILIIALGSVSFIFLLVMIVLAVRCQKDKKLNIYTCLTS
DCCLSCSSCCSRQSRARKKKLSKSDIMLVQSAVNVSGAGTAQVPVEESGSFGSHHQNQNY
CYQVCLTPESAKTDLMFLKPCSPSRSTDTDHNPCGAIVTGYTDQQPDIISNGSILSNETK
HQRAELSYLVDRPRRVNSSAFQEADLVSSKDSGHGDSEQGDSDHDATNRGHTSGADLFSN
CTEECKALGHSDRCWMPSFVPSDGRQGPDYRSNLHVPGMDSVPDTERGKGFASSFRVDIP
ETA
NT seq
2892 nt
NT seq
+upstream
nt +downstream
nt
atgattgtgcttttgattgtcctgtgcatcacggatggagtgctctctcagatacgctac
tctgtgccggaggaagcggaccatggcgccttggtggggaatattgccgaggacctggga
ctggaccttaccaaactggcctcccgccgcttccaggtggtgcccagctctcggacacca
tacctggaggtgaacctggagaacggcgttctattcgttagtgagaaaatcgaccgggag
cagatttgcaagcagagcgccagctgccagctcaacatggaggtgttcttggagaacccg
ttagagctgtttagggttgagatcgaggtggtagacattaatgacaacccacctagtttc
ccagagacggacattacggtggaaatctcagagagcgccactccaggcacccgtttcccc
ctggagagcgcgttcgacccggacgtaggctccaacgctttacgcacatatgatatcacc
aataacaactacttttacttggacgtgcagacccaaacggacggtaacaagttcgcggag
cttgtgctggagaagccactggaccgggagcaacaagcagcgcacaggtacgtgttgacc
gcggtggatggtggtcagcctccccggactggcaccgcgctgctggtggttaaagtgctg
gactctaacgataacgtgccagtgtttgagcagtctgtttacacagtgagcctctctgag
aacgcaccagtaggaacactggtcatccagctgaacgccaccgatatggacgagggtctt
aacggggagatagtttattccttcagtaatcacatctccagccgcgtaaaggacctgttc
agcatagacccgcgcacagggcgcatcgaggtgcgcggagaggtggatttcgaggagagc
agcctgtatcagatcttcgtccaggctaaggatctggggccaaacgctgtgcccgcgcac
tgcaaagtcctggtcaaagtcaccgacctgaacgacaacgcaccggagatcaccttcagc
actgtcaccgagtctgtgagcgagaaagcggttccgggcaccgtcatcgccctgctgagt
gtgacggacctggacgcagaggagaacggacagatccaagtggaaatcctcggtgatgtc
cccttcaaattaaaatcctcctttaggaattatttcaccattgtgactgacgggccgctg
aaccgggagcaggcggactcctactccgtcaccgtggtcgcgcgggataaaggtacgccc
tccctagccaccagtaagtccatcagagtccaggtgtcagatgagaacgataacgcgccc
acatttacgcagaccatatatgatgtgtatgtgacagagaataacgtgccaggggcgtac
atacacgctgtgacggctctggaccaggacatgggacagaacgcgctcatcagctactcc
atattagagtgtgacatccagggcatgtcagtcaaaacctacgtgtcaatcaacgaggag
acaggctatctgtacgcactcaggtcctttgattatgagcaactgaaggatttcacattc
atggtccaggccaaagatgcagggaaccctgagctctcctccaacgccacagtcaaagtc
atcatcgtggaccagaatgacaatgcccccgtggtgctggcccccctggggaaaaacggc
acagccaaggaacccctgccccgctcagctgaaccgggctacctggtgacccgcattgtg
gccatggatgcagatgatggtgagaatgcccggctgtcctacagcatccagagggggaac
gagaacgggatgttcaggatggactggaggaccggggagctccggacagccaggagagtg
tcggccaagcgagacccccaccagctgtacgacctactgattgaggtgagagaccacggc
cagcctccgctgtcctccagtgccagcgtgctggtgatgctggtggacagcgtggcagag
ggccgtggcggcggggaccgaggaggagccaccaaggccaaagatggtactctggatctg
accctcatcctcatcatcgccttgggctccgtctccttcatcttcctgctggtcatgatt
gtgctggctgtgcgctgccagaaggataaaaagctcaacatttacacctgcctgaccagc
gactgctgcctaagctgcagctcctgctgctcacggcagagccgggctcgcaagaaaaag
ctcagcaagtcggatatcatgctggtgcaaagtgccgttaacgtcagcggggccggtact
gctcaagtccccgtggaggagtcagggagcttcggctcccatcaccaaaaccagaactat
tgctaccaggtatgtctgactccagagtctgccaaaaccgacctcatgttcctaaagccg
tgtagtccatctaggagcacagacaccgatcacaacccgtgcggggccatagtgacaggg
tacacagaccagcagcctgacatcatatcaaacggcagcattttatcaaacgagaccaaa
caccagcgagctgaactcagttacctggttgacaggccgagacgtgtcaacagctcggct
ttccaggaggcagacctggtcagctccaaagacagcggccacggagacagtgagcagggg
gacagtgatcacgacgccactaatcgaggccatacctccggcgccgatctgttctctaac
tgcacggaggagtgtaaggctctgggtcactccgatcgctgctggatgccgagcttcgtg
ccctctgatgggcgccagggtccagactaccgcagcaacctccacgtgcccggcatggac
tcggtcccggacacagagcgaggaaaagggtttgctagctcttttcgcgtggacataccg
gagaccgcgtga
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