Scomber japonicus (chub mackerel): 128363030
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Entry
128363030 CDS
T09718
Symbol
lamp1a
Name
(RefSeq) lysosome-associated membrane glycoprotein 1a
KO
K06528
lysosomal-associated membrane protein 1/2
Organism
sjo
Scomber japonicus (chub mackerel)
Pathway
sjo03272
Virion - Hepatitis viruses
sjo03273
Virion - Lassa virus and SFTS virus
sjo04140
Autophagy - animal
sjo04142
Lysosome
sjo04145
Phagosome
Brite
KEGG Orthology (KO) [BR:
sjo00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03273 Virion - Lassa virus and SFTS virus
128363030 (lamp1a)
03272 Virion - Hepatitis viruses
128363030 (lamp1a)
09140 Cellular Processes
09141 Transport and catabolism
04145 Phagosome
128363030 (lamp1a)
04142 Lysosome
128363030 (lamp1a)
04140 Autophagy - animal
128363030 (lamp1a)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
sjo04131
]
128363030 (lamp1a)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
sjo04147
]
128363030 (lamp1a)
04090 CD molecules [BR:
sjo04090
]
128363030 (lamp1a)
Membrane trafficking [BR:
sjo04131
]
Endosome - Lysosome transport
Others
Lysosomal membrane proteins
128363030 (lamp1a)
Autophagy
Chaperone mediated autophagy (CMA)
Cargo receptors
128363030 (lamp1a)
Other autophagy associated proteins
RNautophagy/DNautophagy
128363030 (lamp1a)
Exosome [BR:
sjo04147
]
Exosomal proteins
Exosomal proteins of hepatic cells
128363030 (lamp1a)
CD molecules [BR:
sjo04090
]
Proteins
128363030 (lamp1a)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Lamp2-like_luminal
Lamp2_2nd
VAS1_LD
DEC-1_N
Glycophorin_A
Motif
Other DBs
NCBI-GeneID:
128363030
NCBI-ProteinID:
XP_053179894
LinkDB
All DBs
Position
1:complement(26430068..26436762)
Genome browser
AA seq
417 aa
AA seq
DB search
MKLSHACGALIIAWCAVLGCVQAITLEVKDGDSTCIEAQLSASFSITYNTSGSTRTVQVP
LPDSATVDPGSSSCGTDGSSLPWLVAVFGSGHALGLSFTTNGSLYSVANLTLQYNLSDSS
TFPEANSSDVVTLALASVGIWAPINTTYRCMSPTTFRVGEATVTFSDMKLEAYMPENDLS
PTESICMADQASTAAPPTTASTTTTVAPAPTPAGTPERGSYSIKNGNGTECLLAQMGLQL
NVSYFSPSQNKTIQEITNLTPNLTSSTGSCGASSATLVLTQEKTTVLNFTFTLNSTTNKY
HLSGINLLANWSDMPAPFSASNTSLNYLRSTLGRSYMCNAEQTLAVVPTFSLNTFKLQVQ
PFAVTTNQFATAEECQMDQDQMLIPIIVGAALAGLVLIVLIAYLIGRKRSHAGYQTI
NT seq
1254 nt
NT seq
+upstream
nt +downstream
nt
atgaaactctctcacgcttgcggggcgcttatcatcgcctggtgtgcggttctcggctgc
gttcaggccatcactcttgaagtgaaagacggggactccacctgcattgaggctcagctt
tctgcatcattctccatcacctacaacacctccggcagcacgaggacagtgcaggtcccc
ctgcccgactccgccacagtcgacccaggcagcagctcgtgcggcactgacggcagcagc
ttaccatggctggtggcggtgtttggatccggccacgctctggggctgagctttacaacc
aatggaagtctgtacagtgttgcaaacctgacgctgcagtacaacctcagcgactcatcc
accttccctgaggctaacagctctgatgtggtcaccttggcgttggcttcagttgggatc
tgggcaccgattaacaccacctaccgctgtatgagccccaccactttcagagttggcgaa
gcaactgtgacgttctctgatatgaaactggaggcgtacatgccagaaaatgatctgagt
ccaactgaaagcatatgtatggcagatcaggccagtaccgcagctccacctactactgcc
agtactacaacgactgtagctccagcaccgacaccagcagggacgcctgaacgcggcagc
tactctataaaaaatgggaacggcacagagtgtctcctggcccaaatgggactgcagctc
aatgtctcctatttctctccatctcagaataagactattcaagaaataacaaatctcact
cccaatctgacaagttcaacgggatcatgtggagccagcagtgctaccttagttttgacc
caggagaaaaccaccgtgctgaacttcaccttcactctgaactcgaccaccaacaagtac
cacctgagtgggataaatcttctggctaattggtccgatatgcctgctcccttctcagcc
agtaacaccagtctgaactacctgcggagtacactgggccgctcgtacatgtgcaatgca
gagcaaactctggctgtggtgccgaccttctctctcaacacgtttaagctgcaggtccag
ccttttgcagtcactaccaaccagtttgccacagcggaggagtgtcagatggaccaggac
cagatgctcatccccatcattgtgggagcagctcttgccggcctggtgctgatcgtcctc
attgcatacctaataggcaggaagaggagccatgctggataccagaccatctga
DBGET
integrated database retrieval system
