Scomber japonicus (chub mackerel): 128363056
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Entry
128363056 CDS
T09718
Symbol
hars
Name
(RefSeq) histidine--tRNA ligase
KO
K01892
histidyl-tRNA synthetase [EC:
6.1.1.21
]
Organism
sjo
Scomber japonicus (chub mackerel)
Pathway
sjo00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
sjo00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
128363056 (hars)
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
sjo01007
]
128363056 (hars)
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
sjo03016
]
128363056 (hars)
Enzymes [BR:
sjo01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.21 histidine---tRNA ligase
128363056 (hars)
Amino acid related enzymes [BR:
sjo01007
]
Aminoacyl-tRNA synthetase
Class II (A)
128363056 (hars)
Transfer RNA biogenesis [BR:
sjo03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Other AARSs
128363056 (hars)
Prokaryotic type
128363056 (hars)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA-synt_His
HGTP_anticodon
WHEP-TRS
HGTP_anticodon2
tRNA-synt_2
tRNA-synt_2b
XH
tRNA-synt_2d
Motif
Other DBs
NCBI-GeneID:
128363056
NCBI-ProteinID:
XP_053179920
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All DBs
Position
8:complement(2701505..2711974)
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AA seq
515 aa
AA seq
DB search
MGDKAQIQEAIKTQGEVVRKLKTEKASQEQINEEVAKLLQLKASLGEDDGKHQFVLKTAK
GTRDYNPKQMAIRERVFNTIVGSFKRHGAETIDTPVFELKETLTGKYGEDSKLIYDLKDQ
GGELLSLRYDLTVPFARYLAMNKITNIKRYHIAKVYRRDNPAMTRGRYREFYQCDFDIAG
QYDAMIPDAECLKIVYEILSELDLGDFRIKVNDRRILDGMFAVCGVPKDKFRTICSTVDK
LDKLPWEEVRKEMVNEKGLSEAAADQIGEYVSMQGGLDLAERLLKDQKLSQSKDACDGLT
DIKLLFTYLQIFQVTDKVVFDLSLARGLDYYTGIIYEAVLTQAGVSLVSAEGQNGAPPEE
SVNVGSVAGGGRYDGLVGMFDSKGRKVPCVGVSIGIERIFSIMEQKAEASAEKVRTTEVQ
ILVASAQKNLLEEKLKLITELWKAGIKAEVMYKKNPKLLSQLQYCEEMGIPLVAILGEQE
LKDGVVKLRAVATREELDISRSDLIGEIRKRTSEA
NT seq
1548 nt
NT seq
+upstream
nt +downstream
nt
atgggagacaaggcacagatacaagaagcgattaagactcaaggtgaagtcgttcggaag
ctaaagaccgagaaggcgagccaagagcagattaatgaagaagtggccaagctgctgcag
ctaaaggcttcgttaggagaagatgatggcaaacaccagtttgttctcaagacagcaaag
ggaacgagggactacaacccgaagcagatggccatcagagagagagtcttcaacaccatc
gtcggatccttcaaacgccacggagccgaaaccatcgacacacctgtttttgagctgaag
gaaacgctgacagggaagtacggagaagactccaagctcatctacgacctcaaagaccag
ggaggagagctgctgtccctcagatatgacctcactgtgccctttgctcgctacctggcg
atgaacaagataaccaacatcaagcgctaccacatcgctaaggtctaccgccgtgacaac
ccagccatgacccgcggacgctacagggagttctaccaatgcgattttgacatagctggt
cagtatgacgccatgatcccggatgctgagtgcctcaagatcgtctacgaaattctcagc
gagctggacctcggagacttccgtataaaggtcaatgacagacgcatcctcgacgggatg
ttcgccgtgtgcggagttcccaaagacaagttccgcaccatctgttctacagtggataaa
ctggacaagttgccatgggaggaggtgaggaaggagatggtgaacgagaagggcttgtca
gaggcggctgcagaccagattggggagtacgtcagtatgcagggtgggctggacctagca
gagcgcctccttaaggaccagaaactgtctcagagtaaggacgcctgtgacggcctgaca
gacatcaagctgctgttcacctacctgcagatcttccaggtcacagacaaggtggtgttt
gacctcagtctggctcgcggtctggactattacacaggaatcatctatgaggcagtgctc
acccaggcaggcgtgtcgctggtctctgccgagggccaaaacggggcccctccagaggag
agcgtcaacgtgggcagcgtggccggtggagggcgctatgacggcctggtgggcatgttt
gactccaagggtaggaaagtgccatgtgtgggcgtcagcatcggcatcgagaggatcttc
tccatcatggagcagaaagctgaggcttcagcagagaaggttcggaccacggaggtgcag
atcctggtggcgtctgcacagaagaacctgctggaggagaagctcaaactcatcactgag
ctctggaaggctggaatcaaggcagaggtgatgtacaagaagaaccccaaactgctgagt
cagctgcagtactgtgaggagatggggattcccctggtggccatactgggagagcaggag
ctgaaagacggagtggttaaactccgtgctgtggccaccagagaagagctcgatatttca
agaagtgatcttataggtgagatcaggaaaaggacctctgaggcctag
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