Scomber japonicus (chub mackerel): 128363059
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Entry
128363059 CDS
T09718
Symbol
syvn1
Name
(RefSeq) E3 ubiquitin-protein ligase synoviolin
KO
K10601
E3 ubiquitin-protein ligase synoviolin [EC:
2.3.2.27
]
Organism
sjo
Scomber japonicus (chub mackerel)
Pathway
sjo04120
Ubiquitin mediated proteolysis
sjo04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
sjo00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
128363059 (syvn1)
04120 Ubiquitin mediated proteolysis
128363059 (syvn1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
sjo04121
]
128363059 (syvn1)
Enzymes [BR:
sjo01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
128363059 (syvn1)
Ubiquitin system [BR:
sjo04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
128363059 (syvn1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-RING_2
zf-C3HC4
zf-rbx1
zf-C3HC4_2
zf-RING_UBOX
zf-C3HC4_3
zf-RING_16
zf-RING_11
zf-RING_5
zf-ANAPC11
zf-RING-like
zf-HC5HC2H
zf-Nse
FANCL_C
Motif
Other DBs
NCBI-GeneID:
128363059
NCBI-ProteinID:
XP_053179923
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All DBs
Position
8:complement(8881489..8890280)
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AA seq
632 aa
AA seq
DB search
MVRAALVTATSLALTGAVVAHAYILKHQFYPTVVYLTKSSPSMAVLYIQAFVLVFLLGKF
MRKVFFGQLRAAEMEHLIERSWYAVTETCLAFTVFRDDFSPRFVALFTLLLFLKCFHWLA
EDRVDFMERSPNISWVFHFRVLSLMGLLAVLDFLFVNHACHSIITRGASVQLVFGFEYAI
LLTMVLTTFIKYVLHTVDLQSENPWDNKAVYMLYTELFTGFIKVLLYIAFMTIMIKVHTF
PLFAIRPMYLAMRQFKKAVTDAIMSRRAIRNMNTLYPDATPEDLQASDNVCIICREEMVT
GAKKLPCNHIFHSSCLRSWFQRQQTCPTCRMDVLRASNNNNQTPAPAQAPPPAPAAPANA
PAAPPANVPPGMLPGFPPGIFPFWGPFPAVPPPAAAVAAPGAADPPQTSTEATQAASTSQ
PSSSTADSATAAAAPGSTIPGFPFSFPPPPFPTAPWLPMPPPPPFVSSMPPPPPSLSRLS
EEELRELEAEGRRGLEARLQCLQNIHTLLDAAMLNIHHYLSTVATLTPPRGEASSGEASG
TTPTAASSSAGRSTESPHQEKDATSSDEASEATVLSQPADSTSASSDADRKEAMDEGAEE
EEDGEPNAAELRRRRLRKLEESSSSSPPPPDN
NT seq
1899 nt
NT seq
+upstream
nt +downstream
nt
atggtgcgagcagccttggtgaccgccaccagtttggcgctgactggggccgtggtggcg
cacgcttacatcctcaaacaccagttctacccgaccgtggtctacctcaccaagagtagc
cccagcatggcggtgttgtacattcaggcctttgtgttggtgtttctgctgggaaagttc
atgaggaaggtgttttttggacagttaagagctgcagagatggagcacctcatcgagcgc
tcctggtacgcggtgaccgagacgtgcctggcgttcaccgtgttcagggacgacttctcc
ccccgcttcgtcgccctcttcacacttctcctcttccttaagtgcttccactggctggcc
gaggaccgggtggactttatggagagaagtccaaacatatcctgggtttttcacttcaga
gtattatctctcatgggtctgctggctgtcttggattttctgtttgtgaaccacgcctgt
cacagcatcattacccgaggagcctcggtacagcttgtttttggatttgagtacgccatc
ctgctgaccatggtgctgacaaccttcatcaagtacgtcctgcacactgtagacctgcag
agtgaaaacccctgggacaacaaggccgtctacatgctctacaccgagctcttcacaggt
ttcatcaaagtgctcctgtacattgcctttatgaccatcatgataaaggtccacaccttc
cccctgtttgctatccgccccatgtatctggctatgaggcagtttaagaaagctgtaaca
gatgctataatgtctcgaagagccatccgcaacatgaatacactatacccagacgctact
cctgaagatctgcaggcctccgacaacgtctgcatcatctgtcgggaggaaatggtcaca
ggagccaagaaactaccctgtaatcacatattccactccagctgcctgcgctcctggttc
cagaggcagcagacctgtcccacctgtcgtatggacgtcctgcgggcgtctaataataac
aatcagactccggccccagcacaggctccgccccctgctccagcagcccccgccaacgct
cccgcagccccgcctgccaacgtgcctccaggcatgttacctggcttcccacctggcatc
ttccccttctggggtccgttccctgcagtgcctcctcctgctgcagcagtcgctgctcct
ggtgctgctgaccctccacaaaccagcacagaggctacacaggcagccagcaccagccag
cccagctcgtctactgcagactcggcgacagcagctgctgctccagggtccacgatccca
ggattccccttctccttcccccctccacccttccccactgcaccatggctgcccatgcca
ccacctcctccttttgtgtcgtcgatgcctcctcctcctccgtctctgtcccgtctgtca
gaggaggagctgagggagctggaggcagagggccggcggggcctcgaggccagactccag
tgtctccaaaacatccacaccctgctggacgccgccatgctcaacatccaccactacctc
agcaccgttgccactctcactcctccaaggggtgaggctagctctggagaagccagcggg
acgacccccaccgctgcgtcctcctcagctggtaggagcacagagagtccccatcaggag
aaggacgccaccagctctgatgaagcgagtgaagcgacggtcctctctcagcccgccgac
tccacctctgcctcctcggacgccgacagaaaagaagcgatggacgaaggagcggaggag
gaggaggacggagagcccaacgccgccgagctgaggcgccgtcgcctccgtaaactggag
gaatcgtcgtcgtcgtcgccccctcctcctgacaactga
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