Scomber japonicus (chub mackerel): 128363060
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Entry
128363060 CDS
T09718
Symbol
gabra4
Name
(RefSeq) gamma-aminobutyric acid receptor subunit alpha-4
KO
K05175
gamma-aminobutyric acid receptor subunit alpha
Organism
sjo
Scomber japonicus (chub mackerel)
Pathway
sjo04080
Neuroactive ligand-receptor interaction
sjo04082
Neuroactive ligand signaling
Brite
KEGG Orthology (KO) [BR:
sjo00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04080 Neuroactive ligand-receptor interaction
128363060 (gabra4)
04082 Neuroactive ligand signaling
128363060 (gabra4)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
sjo04040
]
128363060 (gabra4)
Ion channels [BR:
sjo04040
]
Ligand-gated channels
GABA-A
128363060 (gabra4)
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Gene cluster
GFIT
Motif
Pfam:
Neur_chan_memb
Neur_chan_LBD
Motif
Other DBs
NCBI-GeneID:
128363060
NCBI-ProteinID:
XP_053179924
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Position
8:8943986..8961126
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AA seq
556 aa
AA seq
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MVSAKKKEMVTAMRPASIRTLFYFFCLATCVKKTTGQTRKDERIYPENFTRILDRLLDGY
DNRLRPGFGGPVTEVKTDIYVTSFGPVSDVEMEYTMDVFFRQTWVDRRLMYEGPIEILRL
NNLMVTKVWTPDTFFRNGKKSVAHNMTAPNKLFRIMKNGTILYTMRLTISAECPMKLVDF
PMDGHACPLKFGSYAYPKTEMIYTWTKGPQHSVEVPPESSSLVQYDLIGQTVSSETIKSI
TGEYVVMTVYFHLKRKMGYFMIQTYIPCIMTVILSQVSFWINKESVPARTVFGITTVLTM
TTLSISARHSLPKVSYATAMDWFIAVCFAFVFSALIEFAAVNYFTNAQIERAKKKPAKCP
PVPQTTPVKVKDAEEVLQQNPDSNGNLRKRVNYIPHQESSSHQRAQSTTNISGVGRARPL
RPLVTGANGSSSTLSRSSPKSESLLSVASSSAQLVKSTPQTAASTPDVMAATPCKQNTNS
ASLQHLLGPKLERIQMMGNKLELKQTPCSQPTTAGMGGTSKIDKYARILFPVSFGAFNMV
YWVVYLSKDTMVAKGG
NT seq
1671 nt
NT seq
+upstream
nt +downstream
nt
atggtttctgccaagaagaaggagatggtgacagcgatgcgtcccgcttccattcggacc
ctcttctactttttctgtttggcgacttgtgtaaagaaaaccactggacagacaaggaag
gatgaaaggatctatccggagaatttcactcgcattttagaccgacttctggacggttat
gacaacaggctgcgacctggattcgggggtcctgtgactgaggtcaagacagacatttat
gtgacaagttttgggcctgtgtcagatgttgaaatggagtacacgatggacgtgttcttt
cgtcagacgtgggtggaccgtaggttgatgtatgagggtccaatagagattttgaggctg
aacaacttgatggtgactaaagtgtggacgcccgacactttcttcaggaatggcaagaag
tcagtggctcacaacatgacggcccccaacaaactgttccgcatcatgaagaatggaacc
attctctacaccatgaggttgactattagtgctgaatgtcccatgaagctcgtggacttc
cccatggatggacatgcatgccccctcaagtttggaagctatgcctatcccaaaacagag
atgatctatacttggaccaaagggcctcagcattcagtggaggtcccccctgagtcctcc
agcctggttcagtatgatctcatcggccagacggtctccagtgaaacgatcaaatcaatc
acaggtgaatatgtggtgatgacggtctacttccacttgaaacgtaaaatgggctacttc
atgattcagacgtatatcccctgcataatgacagtaatcctctcccaagtgtccttctgg
ataaataaagaatcagttccagcgcgcacagtcttcggcatcaccaccgtcctgaccatg
acgacactcagtatcagcgctcggcactctcttcccaaggtctcgtatgccactgcgatg
gactggttcatcgctgtctgcttcgccttcgtcttttctgccctcattgagtttgccgcc
gttaattacttcaccaacgcacagattgagcgggccaaaaagaagccagccaaatgtccc
cctgtgccccaaactacacctgtcaaggtcaaggacgcagaagaagtgctgcagcagaat
cctgacagcaatggcaacctgagaaaacgtgttaattatattcctcaccaagagtcgagc
agtcaccagagagcccagtccaccaccaacatttcaggagtaggaagagcaagaccgctg
cgacctttagtcaccggagccaacggcagctcctccaccctctcccgctccagccccaag
tctgagagcctgctcagtgtggcctcctcctctgcacagctggtgaaaagcacgcctcag
actgcagcttccacgccagacgtgatggcggcgacgccatgcaagcagaacaccaactcc
gcgtctctgcagcatctgctgggtcccaagctggagcgcatccagatgatgggaaacaaa
ctggagctaaagcagacgccgtgttcccagcccaccactgctggtatgggcggaaccagc
aaaattgacaagtatgcacggatcctgtttcctgtgtccttcggggcatttaacatggtc
tactgggtagtttacttatcaaaggacacgatggtggctaaaggtggctag
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