Scomber japonicus (chub mackerel): 128363063
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Entry
128363063 CDS
T09718
Name
(RefSeq) gamma-aminobutyric acid receptor subunit alpha-2 isoform X1
KO
K05175
gamma-aminobutyric acid receptor subunit alpha
Organism
sjo
Scomber japonicus (chub mackerel)
Pathway
sjo04080
Neuroactive ligand-receptor interaction
sjo04082
Neuroactive ligand signaling
Brite
KEGG Orthology (KO) [BR:
sjo00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04080 Neuroactive ligand-receptor interaction
128363063
04082 Neuroactive ligand signaling
128363063
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
sjo04040
]
128363063
Ion channels [BR:
sjo04040
]
Ligand-gated channels
GABA-A
128363063
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Ortholog
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GFIT
Motif
Pfam:
Neur_chan_LBD
Neur_chan_memb
CytochromB561_N
Motif
Other DBs
NCBI-GeneID:
128363063
NCBI-ProteinID:
XP_053179930
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Position
8:8976640..9001248
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AA seq
451 aa
AA seq
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MWSRESASLLLICLALTALWKTRSVNADAASDANITLFTRILDRLLDGYDNRLRPGLGDR
VTEVKTNIYVTSFGPVSDTDMEYTIDVFFRQTWKDERLTFHGPMNILPLNNLMASKIWTP
DTFFHNGKKSVAHNMTMPNKLLRIKDDGTLLYTMRLTVHAECPMHLEDFPMDFHSCPLKF
GSYAYTISEVTYAWTRNASDSVVVEGESSRLNQYDLLGQTVGRETIKSSTGEYTVMTAHF
HLKRKIGYFVIQTYLPCIMTVILSQVSFWLNRESVPARTVFGVTTVLTMTTLSISARNSL
PKVAYATAMDWFIAVCYAFVFSALIEFATVNYFTKRGWAWDGKSVVTEKKKERASVVKKN
NAYAVAVANYAPNITKDSSTLPTIAKGGTLDPNKPKADGKAQDSKKTFNSVSKIDRMSRI
LFPVLFGSFNLVYWATYLNREPVIKDMVPST
NT seq
1356 nt
NT seq
+upstream
nt +downstream
nt
atgtggagcagggagagcgcttctctacttctcatctgcctggcgctcacagctctctgg
aaaaccagatcagtgaatgccgacgccgcatctgatgccaacatcaccctgttcacacgg
atcctggacagactgctggatggatatgataaccgtctacggcctggtcttggggacagg
gtaactgaagtgaagacaaacatctacgtcaccagctttggaccagtttcagacacagac
atggaatacaccatagatgttttcttccggcaaacctggaaggacgagaggttgacattt
catggaccaatgaatattctgcccctcaacaacctgatggcaagtaaaatctggaccccg
gacaccttcttccacaatgggaaaaagtctgtggctcataacatgaccatgcctaataaa
ctgttgaggatcaaagatgacgggacactgctgtacaccatgaggttaactgtgcatgca
gagtgcccaatgcatctggaggatttccccatggactttcattcctgtccactaaaattt
ggcagctatgcttacacaatctcagaagtgacttacgcttggactcggaatgcctcggac
tctgtggtggtggaaggagagagctcccgcctgaaccagtatgacctgctcgggcaaaca
gtcggacgagaaactattaaatcaagtacaggtgaatacacagtgatgacagctcatttc
catctgaagaggaagattggttattttgtcatccagacgtacctcccatgcatcatgacc
gtcattctctcccaagtgtctttctggttgaatcgagaatcagtgccagccaggactgta
tttggtgtgaccactgttctcacgatgacaactctgagcataagcgctagaaattccctt
cccaaggtggcctatgctacagccatggactggttcattgccgtctgctacgcctttgtc
ttctccgctctgattgagtttgccaccgtcaattacttcacgaagcgcggctgggcttgg
gatggaaagagtgttgtgactgagaagaaaaaagagagggcgtctgtcgtcaagaagaat
aacgcctatgctgtagcggtggcaaactatgcgcctaatatcaccaaggactccagcaca
cttccaactattgccaaaggtggaacattggaccccaacaaacccaaagcagacggcaaa
gcccaagatagcaagaagacttttaacagcgtcagtaaaattgacaggatgtcacggatt
ttgtttccggttctctttggcagcttcaaccttgtctactgggccacctacttaaacaga
gaacctgttataaaggacatggtcccctctacttag
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