Scomber japonicus (chub mackerel): 128363129
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Entry
128363129 CDS
T09718
Symbol
frmpd1b
Name
(RefSeq) FERM and PDZ domain-containing protein 1
KO
K23954
FERM and PDZ domain-containing protein 1
Organism
sjo
Scomber japonicus (chub mackerel)
Brite
KEGG Orthology (KO) [BR:
sjo00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
sjo04990
]
128363129 (frmpd1b)
Domain-containing proteins not elsewhere classified [BR:
sjo04990
]
Other domain-containing proteins
FERM domain-containing proteins
128363129 (frmpd1b)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
FERM_M
RA_2
PDZ
FERM_C_FAK1
PDZ_6
FERM_f0
ChitinaseA_N
PDZ_2
DUF6288
Motif
Other DBs
NCBI-GeneID:
128363129
NCBI-ProteinID:
XP_053180016
LinkDB
All DBs
Position
8:15657558..15672011
Genome browser
AA seq
1717 aa
AA seq
DB search
MEEKERCRSRSPARRASRVQQVVGTIIRRTRESLSRERLLGDGRSQRSNSLSNQNFQAKL
SLQITRDPVLDSSTGHGFTLTTNTPLLVRDIAPGSPADGILYPGDHVLQINDTVLEDLSA
EQVENVLRDLEDCITVTILRHMTNPKSSIMSAEKRARLRNNPVKVRFAEEVVVNGHTQGN
SLLFLPNVLKVYLENGQTKAFKFDNTTTVKDIVLTLKDKLSIRAIEYFALVLEQQYSITK
LLLLHEDEFIQKVVQKKDSHDYRCLFRVCFIPRDPVDMMQEDSSSFEYFFLQSVGDVLQE
RFAVEMKCNTALRLAALHMHERLDSCGQTRASIKNITKEFGLDSFISPTLLSNMREKDLR
KAISYHLKKIQSLLEPRQKVISANQARLAYLTQLGELISYGGRSYPATMMLQDREVLVSL
LVGAKYGMSQVINHKLNVISRLVEFSSISRVELLSESDKVSLLRISLHDMKPFALLMDSL
AAKDLGCLLGGYCKLLVDPSVNVFRLGRPKVRVHRIPAEEGVCGKFAVIEGVCYESLSSY
VSRCCSDSDDSTDEDDPMDSQNYKRPDPASQDWEERRREEEEKRREEERKEREEHKGKQE
VKIIVTTEGKENEGEEEGGATGTGLRIFSVMDEEMNLETTWYHTDPRVTSSFSSLSSGSL
SAALEDSSATAKAPSRPDALHGPRTGDNLPTLDVHHPFLLEPKRHQGPLRPTNLNYRGND
NSCLCFSELSKADFLPSPPEATSDDDDDEEEEEHGMHELRRISKIPSSRDLRMIDSTPFQ
RSPIKRKNKIPPKVPLRTSSIPVHKAGHAEHRLSMDEEGLFLTPSPNPKPALLVKENASE
SEDEFFDAQERFTPPVPDLSDAELADRKNANRLSGNWNGLPAVQGKEPSSPLANKAQSTK
TKSELEQLKDSKNQLNNQQPSPPKPSEKPEVKVKPPLAPKPQLPPKPQIIPPKSPQHGKS
YAHCNGDASGRLSSELLEMEPDTMEFKSVTSGAGGLPLSSPLITAVRCSKQQLPITTLQT
EEKMKRQENSPKKNKDLTHENGVHVISKDKTYILDEEETLKVEGRSNGTALPTKKPPNLP
PIPRSNSGTKLAIPPPVPPKPTSPTNLHPLSLPTSSPVSPTDPGKGIFKDSISPPNGVHP
WSSRNGSVHSGPRRVSLSHESLSPKNTDAPLTLTTSLISTTSKGVGGLEGREPGRSGSGS
DLRTSSSSLGGRLPASALRGKIQALPWYMTRSQEILGTLDYPSTSSINGDTSGFGSGLSV
ASGLSDLNKTPVKDKEIVASKSEGKGNLLDDGAEVVIATIKEAQEVTSHMKNTSGTNGSH
LNLSFKENSVHSGSVSSEQPQSRAHSAVGLGGVSSMQIGGDSPTSSLADSTPPQQHREAC
GCRTVYANCFSGDTEDGVSFDEELTVYEFSRRTRPKPARPPPIPSPTTPSPNPNILSLLR
DNPRPLSTFSTASSELSPLVSRPGSPTTSLGGPLRSLTNKNYGGLKGGFASLRQDIDQLL
LVLERGALDQPQQTSCQDGAGIKVGPDLNHNGSEGSMTANLGPNCTGTWDPTAMTEAERS
LLQAEARRLASGCQRATRVGWAPDEALRSLSNSFSALVQLSAACLRTNPCPGCDICHNPS
LVHRDEDDDSVEAMGKLKEIVGLYREFVGAVETAGTGAGVGGKSVGLTGQSQGESDGVRL
LAKRCTVLISSVFALTQLFRTRTLDTPDTPVNIPLNF
NT seq
5154 nt
NT seq
+upstream
nt +downstream
nt
atggaggagaaggagcgatgtaggagcaggtctccagctcggagggccagccgggtgcag
caggtggtgggaacaataatacgccgtacccgagagtcacttagcagagagcggttgcta
ggcgatgggaggtcgcagcgctccaacagtctgtccaatcagaacttccaagccaagctg
tcactgcagatcaccagggaccctgtcctggacagcagcactggacatggcttcacgctt
accacaaacacacccctgctggtcagggacatcgcccctgggagtcctgcagatgggata
ctgtacccaggggaccatgtgttgcagattaatgataccgtgttggaggatttgagtgct
gagcaggtggaaaacgtcttaagggacttggaggattgtatcactgtgactatcctccgg
cacatgaccaatcctaagtcatccatcatgtcagcggagaagagagctcgtctgaggaat
aatccagttaaagtgcgctttgcagaggaggtggtggtcaatgggcacactcagggaaac
tctcttctcttcctgcccaatgttctaaaagtctatttagagaacggacagactaaggcc
ttcaagtttgacaacaccaccactgtcaaggacattgttctgactctgaaggataaactg
tccatccgggccatcgagtactttgcactggtgttagagcaacagtacagcatcaccaaa
ctactgctgctgcacgaagacgagttcatacagaaggtggtgcagaaaaaagactcccat
gattacaggtgtctgttcagggtgtgtttcattcccagagatcccgtggacatgatgcag
gaagactcctcttcctttgagtacttctttttgcagagtgtcggggatgtgctgcaggag
cgttttgccgttgagatgaagtgtaacactgcactccgccttgctgccctgcacatgcac
gagaggctagatagttgtggacagaccagggcctctatcaagaacattacgaaggagttt
ggcctggatagcttcatctctcccacactgctgagcaacatgagggaaaaggacctgagg
aaagccatcagctaccacctcaaaaagatccagtccctgctagagccacgccagaaggtc
atatctgcaaatcaggctcggttggcctacctcactcagctgggagagctcatttcttat
gggggacgttcctacccagctacaatgatgcttcaggacagggaggtgctggtcagcctg
ctggtgggagcaaagtatggaatgagccaggtcatcaaccacaagctcaatgtgatctct
agactggttgagttcagcagcatcagccgagtggagttgctctctgagtcggacaaagtc
agcctactgcgcatctcactgcacgacatgaagccatttgccttactgatggactctctg
gccgccaaagacttagggtgtctgctgggaggctactgcaaactcctggtggatccaagt
gtcaatgtcttccgtctggggcgcccaaaagtgagggtgcaccggattcctgctgaagaa
ggtgtgtgtggaaagttcgccgtaatagagggagtgtgctatgaatccctatcaagttat
gtgtctcgctgctgtagtgactcagatgactcaacagatgaggatgacccaatggattct
cagaattataaacgcccagacccagcaagtcaggactgggaagagaggaggagagaggag
gaagaaaagaggagagaggaagagcgaaaagagagagaggagcataaaggcaaacaggaa
gtgaaaataatagtgacaacagaaggtaaggaaaatgagggtgaagaggaaggaggcgca
acaggaactggcctgcgaatatttagtgttatggatgaggaaatgaatctggagaccacc
tggtaccacaccgatccacgggtcactagcagcttttccagcttgtccagtggctcttta
agtgctgccctagaagacagcagtgccacagccaaagccccttctcgtccagatgcactt
catgggccacgcacaggtgacaatcttccaaccttggatgttcaccaccccttccttttg
gagccaaaacgccaccaaggtcccctgcgaccaactaacctcaattaccgtggcaatgac
aactcttgcctttgcttttctgagctctccaaggctgatttcctccctagtccacctgaa
gctaccagtgatgatgatgacgatgaggaagaggaagagcatggcatgcatgaactcaga
cgcatttccaagatccctagttcaagagatttgagaatgattgacagtacaccctttcaa
agatcacccattaaaagaaagaataagatccctcccaaagtcccattgaggacgagttca
attcctgtgcacaaagcaggacatgctgagcaccgcctctcgatggatgaagagggttta
tttctaactccttcacccaaccccaaaccagctcttttggtcaaagagaatgcctctgag
tccgaagacgagttttttgatgcacaggagagatttactcccccagttcctgatctatca
gatgcagagcttgctgaccggaagaatgcaaatcgtctgagtggaaactggaatggtctt
ccagctgtccaagggaaagagccatcctccccccttgccaataaagcccaatctactaaa
accaagagtgaattggagcaacttaaagactccaaaaaccaacttaacaaccaacaaccc
agtccaccaaagccatctgagaaacctgaagttaaggtcaaaccacctttggcacctaag
ccacagctgcctcccaaacctcagatcattcctcccaagtcccctcaacatgggaaatca
tatgcccactgcaatggggatgcctctggacgtctgtcttctgaactcctggagatggag
cctgacacgatggagttcaagtctgtcacatctggtgcaggtggattgcctctctcgtca
cccctgatcacagcggtgcggtgcagcaagcaacaactacccattacaacactacaaact
gaggaaaagatgaagaggcaagaaaacagcccaaaaaagaataaagatctgacacatgag
aatggagtgcatgttatttccaaagacaaaacatacattctggatgaagaggagacactt
aaagttgagggaagaagcaatggaactgccctacctacaaaaaagccacccaacttaccc
cctatccctcgctccaattcaggtacaaagttagccattcccccaccagtaccccctaag
cctacttctcccaccaatctccaccccttgtcactacccactagctctcctgtttccccc
actgatccaggtaaagggatctttaaggacagcataagtccaccaaatggagttcaccct
tggagcagccgcaatggcagcgtccactcaggacccaggagggtttctctgagccatgag
agcctgtcacccaaaaatacagatgcacctctcacccttaccacatccctcatctcaacc
acctccaaaggtgttgggggcttagaaggcagagaaccgggaagatctgggtcaggatca
gatctgaggaccagctcctctagcctgggaggcagattaccagcctctgcccttagaggg
aagatccaggctctgccctggtacatgacacgttctcaagagattttgggaactctggac
tatccttccactagctccatcaatggagatacatctggatttggctctggtttgtctgta
gccagtggtttatcagacttaaataagacccccgtcaaggacaaagaaattgtggcctca
aaatcagaagggaaagggaaccttttagatgatggagctgaagttgtcatagccaccatc
aaagaggcccaggaagtgacctcacatatgaaaaacaccagtgggacaaacgggtcacac
cttaatctgagttttaaagagaacagtgttcacagtggcagtgtttcatcggaacagcca
cagtcacgggcccattcagcagtggggttgggaggagtgtccagcatgcaaattggaggt
gactctccaacatcgtcacttgcagacagtactcctccacagcagcaccgtgaggcctgt
ggctgccgaactgtctacgccaactgttttagtggggacactgaagatggtgtcagcttt
gatgaggaacttactgtttatgagttctcccgccgcacacggcccaaacctgcccgacct
ccacctatcccttcacctacaacaccctctccaaaccctaatattctgtcactgctgagg
gacaaccctcgtccactgtctactttctcaactgcgtcttctgaactcagtcccctagtt
tcacgtcccggctcccctacaacctcacttggtggtcctcttcgttcccttaccaacaag
aattatggtgggttaaagggaggttttgcctcccttcgacaagatatagatcaacttctg
ctggtgttagagaggggagcacttgatcagccacaacaaacatcatgtcaagatggtgca
ggcataaaagttgggcctgacctaaatcacaatggaagtgaaggcagtatgactgcaaac
ctaggtccaaattgtactgggacctgggatcctaccgccatgacagaggctgaaaggagt
cttctccaggcagaagctcgacgattggcatctgggtgtcagcgggccacacgtgtgggc
tgggctccggatgaagccctgcgttctttatctaacagcttcagtgccctggttcagttg
tcagcagcttgcctgcgaacaaatccgtgccccggttgtgacatctgtcataatccaagt
ttggtccacagggatgaggacgatgacagtgtggaggccatgggcaagctaaaagagata
gtgggcctgtaccgtgagtttgtcggggctgttgagacagcaggaactggtgctggggtg
gggggtaagagcgtggggctcactggacagagccagggggagagtgatggagtgaggcta
ctagccaaacgctgcactgtactcatctcctctgtattcgcactcacacagctcttccgg
acacgcacactagacaccccagacacaccggttaacatacctctcaacttttga
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integrated database retrieval system
