Scomber japonicus (chub mackerel): 128363139
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Entry
128363139 CDS
T09718
Symbol
rnf20
Name
(RefSeq) E3 ubiquitin-protein ligase BRE1A
KO
K10696
E3 ubiquitin-protein ligase BRE1 [EC:
2.3.2.27
]
Organism
sjo
Scomber japonicus (chub mackerel)
Brite
KEGG Orthology (KO) [BR:
sjo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
sjo04121
]
128363139 (rnf20)
Enzymes [BR:
sjo01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
128363139 (rnf20)
Ubiquitin system [BR:
sjo04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
BRE1 proteins
128363139 (rnf20)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
BRE1B
CC_Bre1
zf-C3HC4
zf-C3HC4_3
zf-C3HC4_2
zf-RING_UBOX
zf-RING_5
BRE1
zf-RING_2
HAT1_C
zf-rbx1
zf-ANAPC11
Motif
Other DBs
NCBI-GeneID:
128363139
NCBI-ProteinID:
XP_053180038
LinkDB
All DBs
Position
8:15556969..15568130
Genome browser
AA seq
1020 aa
AA seq
DB search
MSGQKRPADPSGPSSSGAPPEKRRERDGEDGGPGVSAAAGGATAVETVIKLGGVSNTEEQ
DIKALQAKNRKLGEALDQRQVIEDELRERIERLETRQATDDASLLILNRYWNQLDENIQF
IIRRYDQSPSEPEKSPAGEGRSLKPETPEPDGDSNQERAKERGHQGETSNSFLATLASSS
SEEMEAELQERVESSQKQANRVVEIYVRLKSTVDQLKTELDSEAEGTLWQAASKLNALLT
SENERLQQLTEDLKQKHSHMTSESRSLGRAANKADQRVSELQVLIEELQWDMEKIRRREN
RLNAHLSEILERVNSKGYKVCGEASSVCGTITINKRKFEEMNSELEENQELADNRLTELQ
KLQQDLQTVHQENNNMKTELLSRAEGMVKETSEYRCLQSQFSVLYNESLILKAQLDETRA
RLNTTRTARLRQLEHMENDEVALQRKVRTEVFQLEDTLAQVRKEYEMLRIEFEQTLAANE
QAGPINREMRHLISTLQTHNQQMKGEVVKYKIRLRETQTELNQIRSSKGNAILQFQSSTE
MDVKDETTSPSTLTVSGDPVLKTDPDNGSSTPSSTGASVKTEPGVEPEPTLKEEEKEDKK
EKEEKKEKDLIKKEEKDREREKEKERERPTRSGVIKEEKEKPGSSSQLEESAGERLSMVG
GSKRKEMEQLKIVRAELKKAQESQREMKLLLDMYRSAPKEQRDKVQLMAAEKKAKSEGDE
LRQRLRELEERERREGKKMADEEALRKIRSVEEQIDILNKKLSIAKQEEDALLSEMDVTG
QAFEDMQEQNIRLMQQLREKDDANFKLMSERIKSNQIHKLLKEEKEELADQLLTLKTQVD
AQLQVVRKLEEKERLLQGTISTAERELALRTQALDMNKRKAQDSALLSEEVRTQLEQVQQ
RLSLVREEVVENSISREKESFNARRAQEDISKLRRKIEKAKKPAEKISNGDDILNEEISE
YKARLTCPCCNSRVKDAVLTKCFHVFCFECVKTRYDTRQRKCPKCNAAFGANDFHRIYIG
NT seq
3063 nt
NT seq
+upstream
nt +downstream
nt
atgtcggggcagaagcgtcctgctgaccccagcggtccctcgtcctccggcgctccccca
gagaagcgcagggagcgtgacggagaggacggaggtcctggtgtcagtgccgctgccgga
ggggccaccgcggtggagacggtcatcaaactgggaggggtgtccaacacggaggaacaa
gacatcaaagctctccaggccaagaaccgaaagttgggagaagctcttgatcaaagacag
gtgattgaggatgaactgcgagagcgaattgaaagactggagacccgccaggccactgat
gatgctagtcttctgattcttaatagatactggaaccagcttgatgaaaacattcagttt
atcatcaggcgttatgaccaatcacccagcgaaccagagaaatctccagcaggtgagggg
cggagcctgaagccagaaactcctgaacctgatggcgactccaaccaggaaagggcaaaa
gagagaggccaccagggagagacgtccaactctttcctcgccacgctggccagcagcagc
agtgaggagatggaggccgagctccaggagagggtggagtccagccagaagcaggccaat
cgcgtggtggagatctacgttcgtctaaagagcactgtggaccaactgaagacagagctg
gactctgaagctgagggcactttgtggcaggcagcttccaaactaaacgccctcctgacc
agtgaaaatgagcggctacaacagctgactgaagacctcaagcagaaacacagtcacatg
accagcgagtcccggtctctggggcgtgcagcgaacaaggcagaccagcgtgtcagcgag
ctgcaggttctgatcgaggagcttcagtgggacatggagaagatccgtcggcgagaaaat
cggctcaatgcacacctgagcgagattctggaaagggtgaacagcaaaggctataaggtg
tgtggggaggccagcagcgtatgtgggaccatcactattaacaagagaaagtttgaggaa
atgaacagcgagttggaggagaaccaggagcttgcagacaaccgcctcactgagctgcag
aagctccagcaggacctgcagactgtccaccaggagaacaacaacatgaagacggagttg
ttgagtcgagcggagggcatggtgaaagagacttctgagtatcgatgtctgcagtcacag
ttttctgtgctttacaacgagtctctgatcctcaaggctcagttagatgagacacgcgct
cgccttaacactacaaggacggcacgccttcgacagctggagcacatggagaatgatgaa
gttgctctgcagaggaaagttcgcacagaggtgtttcagctggaggacacactggcccag
gtcaggaaggagtatgagatgttgcgcatcgaatttgaacagactctcgctgccaacgag
caggcaggccctattaacagagagatgcgccatctgattagcacgctgcaaacccacaac
cagcagatgaagggagaggtcgtgaaatacaaaattagactgagagagacgcaaacagaa
ctcaatcagatccgttcttcaaagggcaacgccatcctccagttccaatctagcacagag
atggatgtgaaagatgagacaacctctccttcgaccctaactgtttcgggggatcctgta
ttgaagacagaccctgacaacggctcctctacacccagcagcactggcgcctcagtgaaa
accgagcctggagtagaacctgaacccacactaaaggaggaggagaaagaagataaaaaa
gagaaggaggaaaagaaagaaaaggaccttattaagaaagaggagaaagacagagagagg
gagaaagaaaaggagagggagaggccaacccgcagcggtgtgataaaggaagagaaggag
aagccagggagcagtagccaactagaggagtctgccggagagcggctgtccatggttgga
ggatccaagaggaaggaaatggaacagctgaaaattgttcgagctgagctcaagaaagct
caggagtctcagagggagatgaagctgctgttggacatgtaccgctcagcacccaaggag
cagagggacaaagtccagctcatggctgcagagaagaaggccaagtcagagggagatgag
ctgcggcaaaggctgagggagctggaggagagagagaggagggaaggaaagaaaatggca
gacgaagaagctcttaggaagatccgctctgtggaggagcagatcgacatcctcaacaaa
aagctgtctattgcaaaacaggaggaggacgcgctgctgagcgagatggatgtgacgggc
caggccttcgaagacatgcaggaacagaacattcgtctgatgcagcagctcagagaaaaa
gacgatgccaacttcaagctgatgagcgagcggatcaagtctaaccagatccacaagctg
ctaaaagaggagaaggaggagctagctgaccaactgctgactttaaaaactcaggtcgat
gcccagctgcaggtggtgaggaagcttgaggagaaggagcgcctcctgcagggcaccatc
agtactgctgagagagagttggcactgcggacgcaggctttggacatgaacaaacgcaag
gctcaggactcggcgttgctgtcagaggaggtgcgaactcagttggagcaggttcagcag
aggctcagcctggtcagagaagaggtcgtagagaacagcatctcgagggagaaggagtcc
tttaatgcccgacgagcacaggaggacatctccaaacttaggagaaagattgagaaggcc
aagaaaccagctgagaaaatcagcaacggagatgatatccttaatgaagaaatcagcgag
tacaaggcacgtctaacatgtccatgctgcaactcccgtgtgaaggatgcagtcctgaca
aagtgcttccacgtcttctgcttcgagtgcgtgaagacgcgctacgacacacgccagagg
aagtgccccaagtgcaacgctgctttcggagccaacgacttccatcgcatttacatcggc
tag
DBGET
integrated database retrieval system
