Scomber japonicus (chub mackerel): 128363147
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Entry
128363147 CDS
T09718
Symbol
rnf4
Name
(RefSeq) RING finger protein 4
KO
K22651
E3 ubiquitin-protein ligase RNF4 [EC:
2.3.2.27
]
Organism
sjo
Scomber japonicus (chub mackerel)
Brite
KEGG Orthology (KO) [BR:
sjo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
sjo04121
]
128363147 (rnf4)
Enzymes [BR:
sjo01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
128363147 (rnf4)
Ubiquitin system [BR:
sjo04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
128363147 (rnf4)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-RING_2
zf-C3HC4_2
zf-RING_UBOX
zf-RING_5
zf-C3HC4
zf-C3HC4_3
zf-RING_4
zf-rbx1
zf_RING_Vps8
RING_XB3-XBAT31
zf-C3HC4_4
Prok-RING_4
Rtf2
zf-UDP
zf-RING_11
IBR_1
TRAF3_RING
zf-RING_6
Mucin15
zf-RING_16
zf-ANAPC11
zf-C3HC4_5
DZR
Motif
Other DBs
NCBI-GeneID:
128363147
NCBI-ProteinID:
XP_053180052
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All DBs
Position
8:34462081..34467200
Genome browser
AA seq
209 aa
AA seq
DB search
MMLTCSCVSASGLTSDMNASQRKRRTTGSPPGSRSKSSRAASRNANANASRESDVEQNQN
EEQTETISVLDQSVEDVVDLTCEEAAVVDLTHNDSVLLVEEGPQNRRTATGESYVVSSDE
DEATPPSLNATTLSSIQANSATRLAPGVISCPVCMDSYSEIVESGRLVVSTKCGHVFCSQ
CLRDALTSSHTCPTCRKRLTSRQYHPLYI
NT seq
630 nt
NT seq
+upstream
nt +downstream
nt
atgatgctaacatgttcctgtgtttcagcttccggtctgacgtcagacatgaacgcgtct
cagaggaagaggaggacaacaggaagtcctccaggttccaggtctaagagcagcagagca
gctagcaggaatgctaatgctaatgctagcagagagtctgatgtggaacagaaccagaac
gaggagcagacagagaccatcagcgtgctggaccagagtgtggaggacgtggtggatctg
acctgcgaggaagccgctgtagttgacctgacgcacaacgactcagtgctgctggtggag
gaaggtcctcagaacaggagaaccgccacaggtgagagttacgttgtcagcagtgatgaa
gatgaagccacgcccccttctctcaacgccaccacgctgtcttctatacaggccaacagc
gccaccaggttggctccgggggtgatcagctgtcccgtctgcatggactcgtactctgag
atcgtggagagcggccgattggtggtttccactaaatgtggtcacgtgttctgcagccag
tgtctgagagacgctctgacatcatcacacacctgtcccacctgcaggaagagactcacc
tcccgacagtaccacccgctctacatctga
DBGET
integrated database retrieval system