KEGG   Scomber japonicus (chub mackerel): 128363147
Entry
128363147         CDS       T09718                                 
Symbol
rnf4
Name
(RefSeq) RING finger protein 4
  KO
K22651  E3 ubiquitin-protein ligase RNF4 [EC:2.3.2.27]
Organism
sjo  Scomber japonicus (chub mackerel)
Brite
KEGG Orthology (KO) [BR:sjo00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04121 Ubiquitin system [BR:sjo04121]
    128363147 (rnf4)
Enzymes [BR:sjo01000]
 2. Transferases
  2.3  Acyltransferases
   2.3.2  Aminoacyltransferases
    2.3.2.27  RING-type E3 ubiquitin transferase
     128363147 (rnf4)
Ubiquitin system [BR:sjo04121]
 Ubiquitin ligases (E3)
  Single Ring-finger type E3
   Other single Ring-finger type E3
    128363147 (rnf4)
SSDB
Motif
Pfam: zf-RING_2 zf-C3HC4_2 zf-RING_UBOX zf-RING_5 zf-C3HC4 zf-C3HC4_3 zf-RING_4 zf-rbx1 zf_RING_Vps8 RING_XB3-XBAT31 zf-C3HC4_4 Prok-RING_4 Rtf2 zf-UDP zf-RING_11 IBR_1 TRAF3_RING zf-RING_6 Mucin15 zf-RING_16 zf-ANAPC11 zf-C3HC4_5 DZR
Other DBs
NCBI-GeneID: 128363147
NCBI-ProteinID: XP_053180052
LinkDB
Position
8:34462081..34467200
AA seq 209 aa
MMLTCSCVSASGLTSDMNASQRKRRTTGSPPGSRSKSSRAASRNANANASRESDVEQNQN
EEQTETISVLDQSVEDVVDLTCEEAAVVDLTHNDSVLLVEEGPQNRRTATGESYVVSSDE
DEATPPSLNATTLSSIQANSATRLAPGVISCPVCMDSYSEIVESGRLVVSTKCGHVFCSQ
CLRDALTSSHTCPTCRKRLTSRQYHPLYI
NT seq 630 nt   +upstreamnt  +downstreamnt
atgatgctaacatgttcctgtgtttcagcttccggtctgacgtcagacatgaacgcgtct
cagaggaagaggaggacaacaggaagtcctccaggttccaggtctaagagcagcagagca
gctagcaggaatgctaatgctaatgctagcagagagtctgatgtggaacagaaccagaac
gaggagcagacagagaccatcagcgtgctggaccagagtgtggaggacgtggtggatctg
acctgcgaggaagccgctgtagttgacctgacgcacaacgactcagtgctgctggtggag
gaaggtcctcagaacaggagaaccgccacaggtgagagttacgttgtcagcagtgatgaa
gatgaagccacgcccccttctctcaacgccaccacgctgtcttctatacaggccaacagc
gccaccaggttggctccgggggtgatcagctgtcccgtctgcatggactcgtactctgag
atcgtggagagcggccgattggtggtttccactaaatgtggtcacgtgttctgcagccag
tgtctgagagacgctctgacatcatcacacacctgtcccacctgcaggaagagactcacc
tcccgacagtaccacccgctctacatctga

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