Scomber japonicus (chub mackerel): 128363171
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Entry
128363171 CDS
T09718
Symbol
rlim
Name
(RefSeq) E3 ubiquitin-protein ligase RLIM
KO
K16271
E3 ubiquitin-protein ligase RLIM [EC:
2.3.2.27
]
Organism
sjo
Scomber japonicus (chub mackerel)
Brite
KEGG Orthology (KO) [BR:
sjo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
sjo04121
]
128363171 (rlim)
Enzymes [BR:
sjo01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
128363171 (rlim)
Ubiquitin system [BR:
sjo04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
128363171 (rlim)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-RING_2
zf-rbx1
zf-RING_11
zf-C3HC4_2
zf-C3HC4
zf-ANAPC11
zf-RING_5
zf-C3HC4_3
zf-RING_UBOX
Prok-RING_4
zf-RING_16
zf-RING_4
Motif
Other DBs
NCBI-GeneID:
128363171
NCBI-ProteinID:
XP_053180080
LinkDB
All DBs
Position
8:12844379..12850940
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AA seq
668 aa
AA seq
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MEGSDSVEQGGSDQPESQRRRQLDRLDREEAFYQFVNNLSDEDYRLMRDNNLLGTPGEVT
EDELLHRLQQIKDGPEQQNNTPRTESAEDPGEQPESSEDPAGGDSLLDWLNTVRRTGNTT
RTGHRGNQSWRAVSQTNPNSGDFRFSLEISVNRNLAEQQGAAEGEQESSEGQAAAAAAAA
AAAAALADANANPNPNPNPNPNPNPNPEPQVPMETEVVEEPVVEELAVIVEPEPELEEVV
SQEILPEPPSSPAVLPVQPTLPPSPRRGQRRPRSRSPEPRRTRARTARSRSPLNLDQLED
LPNPRHAPSSQGPSSDTNAPPVPPVEGSSRTRQHVLSRQSTADSDAQQSRAGAESVPEAQ
NVRPQEGETAGGEGGAAGRRPPTIMLDLQVRRVRPGEYRQRDSIASRTRSRSQNSNNTFL
YESERGGFRRTFSRSERAGVRTYVSTIRIPIRRISDAGLGEATSMALQSMIRQIMTGFGE
LGYLMDSDSDSSDSNRGASTPADLTETLNNPDATTAPTPAAEVEEPPVTAGVRARTVETD
MDEGLATAPPASGGRARPRPPISLEEPSSLPFLRLAHFFLLNDDDEDQPQGLTKEQIDNL
SMRNFGESDALKTCSVCITEYAEGNKLRKLPCSHEYHVHCIDRWLSENSTCPICRRAVLV
SANRESVV
NT seq
2007 nt
NT seq
+upstream
nt +downstream
nt
atggaagggtctgatagtgtagagcagggcggcagtgaccagccagagtcacagcgcaga
aggcagctggaccgcctggacagagaggaggccttctatcagtttgtcaacaatctcagt
gatgaggattatcgtctcatgagagacaacaatcttttgggcaccccaggagaggtaaca
gaggatgaactgttacatagacttcagcaaatcaaagatggtccagaacaacagaataat
actcccaggactgaaagtgcagaggatccaggtgaacaaccggaaagctctgaggatcct
gctggtggggatagtctcctggactggctgaacacagtgaggcgtacaggcaatacaacc
agaactggtcatcgtgggaaccagtcatggcgggcagtaagccagaccaacccaaacagt
ggagattttcgcttcagcctggaaatcagtgtgaaccgcaacctggctgaacagcaggga
gcggctgaaggagagcaggagtcttcagagggtcaagcagcagcagcagcagcggcggca
gcagcagcggcagcgcttgcagatgcaaatgcaaatccaaatccaaatccaaatccaaat
cctaatcctaatccaaatcctgaaccacaggtccctatggagacagaagtggttgaagaa
ccagttgtagaggagctggctgtcatagtggaaccagagcctgaattagaagaagttgtt
tcacaggagatactgccagaaccccccagctcaccagctgtccttccagtacaaccaaca
cttcctccttctccacgcagaggacaaaggagacctcgcagccgcagtccagaaccacgc
aggaccagggctcgtacagccagaagtcgctctcctctcaacctagatcagctggaggat
ctccctaatccacgtcacgctcccagctctcaaggccccagctctgacaccaacgctcct
cctgtgcctccagtggagggcagttctcggactcgacaacatgttctgtccaggcaaagc
actgctgacagtgatgctcagcagtctagggctggagcagaatcagtcccagaggcccaa
aacgtcagacctcaggaaggagaaactgctggaggggaagggggtgcagctggacgccgc
ccccctactatcatgcttgatctccaggtgcgtcgtgtgcgtccaggcgaatatcgccaa
agagacagcatcgccagtcgaacccgctcacgctctcagaactcaaacaacacatttctt
tatgaaagtgagcgcggtggatttcgtaggactttctcacgctcagagcgtgctggtgtg
aggacctacgtcagcactattcgcatccctatccggagaatctctgatgcaggtttggga
gaggcaacctcaatggctctccagtctatgatccggcagatcatgacaggctttggtgaa
ctcggatacctcatggattcagactctgactcttcagattcaaaccgtggagccagcaca
cctgcggatctcactgagaccctgaacaacccagatgctaccactgctccgactcctgct
gctgaggttgaggaaccacctgtgactgctggagtcagggcaaggacagttgagactgat
atggatgagggccttgccactgctccacctgcctctggtggtagggctcgacctagacct
cctatcagcttagaagagcccagctcactgcccttcctccgacttgcccacttcttcctc
ctaaatgatgatgatgaggaccagccccaagggctgaccaaagagcagattgataacctc
tctatgcgcaactttggtgagagtgatgccttgaagacttgcagtgtctgcataacagag
tatgcagaaggaaataagctacgtaagctgccctgttctcatgagtaccatgtgcactgc
attgatcgctggctgtctgaaaactccacttgccccatctgccgcagggcagtcctggtg
tctgccaaccgagagagtgtggtttag
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