Scomber japonicus (chub mackerel): 128363216
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Entry
128363216 CDS
T09718
Symbol
canx
Name
(RefSeq) calnexin
KO
K08054
calnexin
Organism
sjo
Scomber japonicus (chub mackerel)
Pathway
sjo04141
Protein processing in endoplasmic reticulum
sjo04145
Phagosome
Brite
KEGG Orthology (KO) [BR:
sjo00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
128363216 (canx)
09140 Cellular Processes
09141 Transport and catabolism
04145 Phagosome
128363216 (canx)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03110 Chaperones and folding catalysts [BR:
sjo03110
]
128363216 (canx)
04131 Membrane trafficking [BR:
sjo04131
]
128363216 (canx)
09183 Protein families: signaling and cellular processes
04091 Lectins [BR:
sjo04091
]
128363216 (canx)
Chaperones and folding catalysts [BR:
sjo03110
]
Other chaperones and cochaperones
Calnexin / calreticulin
128363216 (canx)
Membrane trafficking [BR:
sjo04131
]
Endocytosis
Clathrin-mediated endocytosis
Others
128363216 (canx)
Autophagy
ER-phagy
Other ER-phagy associated proteins
128363216 (canx)
Lectins [BR:
sjo04091
]
L-type lectins
128363216 (canx)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Calreticulin
PFF1_TM
MAP17
Piezo_TM1-24
FAM176
Neur_chan_memb
DUF2201_N
DDHD
RCR
Zip
SARAF
V_ATPase_I
SieB
Motif
Other DBs
NCBI-GeneID:
128363216
NCBI-ProteinID:
XP_053180136
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All DBs
Position
8:complement(33797760..33827769)
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AA seq
619 aa
AA seq
DB search
MDQRVWFSVLLAAGLLCLSVSPVCRADDDAMEEALGDDVDVEDELDLDVAGVDDDEEELD
LQDEAAAPKAPAIPKVTYKAPEPMGEHFFAESFDRGTLEGWVMSSAKKEGADEDIAKYDG
KWSVEEMKDSKLPGDKGLVLKSRAKHHAISAQMLRPFTFDTKPLIIQYEVNFQSGIDCGG
AYVKLLTQTPDLDLDHFVDKTPYTIMFGPDKCGEEYKLHFIFRHQNPKTGEYEEKHAKKP
DADLRTYYTDKKTHLYTLVVNPDNTFEVLVDQTVVNSGSLLTDVTPPVNPPAEIEDPDDQ
KPEDWDERAKIQDPAAAKPEDWDEDAPAQIPDEEAVKPDGWLDDEPEYIGDPDAVKPEDW
DEDMDGEWEAPQVPNPACETAPGCGAWKRPMIDNPNYKGKWKAPMIDNPNYQGVWKPRKI
SNPAFFEDLHPFRMSAFSAVGLELWSMTSDIFFDNFFISNDRITADRWANDGWGLKKAAE
GAADPGLATQMLNAAEERPWLWVVYVLTVALPLVLIVVFCCTGKKKSAAATPAAEYKKTD
EPQPDVKEEEEEEEEEEKAENSSPASGEKSDGEENAPEKEEEEEEEEEEEGEGEEKEEEE
KLEDDVLRRSPRNRKVRRD
NT seq
1860 nt
NT seq
+upstream
nt +downstream
nt
atggatcagcgggtttggtttagcgtgctcttggcggcggggcttctgtgtctcagcgtg
tctcccgtctgtcgggccgatgacgacgcgatggaagaagctctgggagacgacgtggac
gtggaggacgagctggatctggacgtcgccggagtcgatgatgatgaagaggagctggac
ctgcaggacgaagctgcagctcccaaggctccagcgatacccaaggtgacctacaaagct
ccagagccgatgggggaacacttcttcgctgagagctttgacagggggacacttgaaggg
tgggtgatgtcgagcgctaagaaggaaggtgctgatgaagatatcgccaagtacgacggt
aaatggtcggtggaggagatgaaggacagtaagcttccaggtgataaaggtttggttctg
aagtcgagagctaaacatcacgccatctctgctcagatgctgcgacctttcaccttcgac
accaagcccctcatcatccagtatgaggtgaacttccagtcaggtatcgactgcggcgga
gcttacgtcaaactgctgactcagactcctgacctcgacctggaccactttgtggataag
actccgtacaccatcatgttcggacctgataaatgtggagaagaatacaagctgcacttc
atcttcagacaccagaaccccaaaaccggagaatacgaagagaagcacgccaagaaaccc
gacgctgacctgagaacctactacactgataagaagacacatctgtacactctggtggtg
aaccctgacaacacctttgaggttctggtggaccagacggtggtgaacagcggcagcctg
ctgacggatgtgaccccccccgtgaacccccccgctgagatcgaagaccccgacgaccag
aaaccagaagactgggacgagagggccaagatccaggaccctgctgccgccaagcccgag
gactgggacgaggatgctcccgctcagattcccgatgaagaagcagtgaaacccgacggc
tggctggacgacgagcccgagtacatcggagaccccgacgccgtcaaacccgaggactgg
gacgaggacatggacggcgaatgggaagctcctcaggtcccgaacccggcctgtgagacc
gcccccggctgcggagcctggaaacgaccaatgatcgacaaccccaactacaagggcaag
tggaaggctccgatgatcgacaaccccaactaccagggcgtctggaagccgaggaagatc
tccaacccggccttcttcgaggacctgcaccccttcaggatgagcgccttcagtgccgtg
gggctggagctctggtccatgacctccgacatcttcttcgataacttcttcatctccaac
gacagaatcaccgcagaccgctgggccaacgatggatggggcctgaagaaggctgcagag
ggagccgctgatcccggtcttgccacccagatgttgaacgcagcagaggagcgtccgtgg
ctctgggtcgtctacgttctcacggtggcgttaccgctcgtcctcatcgtcgtcttctgc
tgcaccggaaagaagaagagcgcagcagcgacgccggcggctgaatacaagaagacagac
gagcctcagcctgatgtgaaggaggaggaagaggaggaggaagaggaggagaaggctgag
aacagcagtccagcttcaggagagaagagcgacggagaggaaaacgctccagagaaagaa
gaagaagaagaggaagaggaggaagaagaaggagagggagaagagaaagaggaagaggag
aagttagaggatgatgttctgaggagatctcctaggaacaggaaagtcagaagagactaa
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