Scomber japonicus (chub mackerel): 128363217
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Entry
128363217 CDS
T09718
Symbol
g3bp1
Name
(RefSeq) ras GTPase-activating protein-binding protein 1
KO
K17265
Ras GTPase-activating protein-binding protein 1 [EC:
5.6.2.5
5.6.2.3
]
Organism
sjo
Scomber japonicus (chub mackerel)
Pathway
sjo04623
Cytosolic DNA-sensing pathway
Brite
KEGG Orthology (KO) [BR:
sjo00001
]
09150 Organismal Systems
09151 Immune system
04623 Cytosolic DNA-sensing pathway
128363217 (g3bp1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
sjo03019
]
128363217 (g3bp1)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
sjo04147
]
128363217 (g3bp1)
Enzymes [BR:
sjo01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.3 DNA 5'-3' helicase
128363217 (g3bp1)
5.6.2.5 RNA 5'-3' helicase
128363217 (g3bp1)
Messenger RNA biogenesis [BR:
sjo03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
Stress granule specific factors
128363217 (g3bp1)
Exosome [BR:
sjo04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
128363217 (g3bp1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
NTF2
RRM_1
RRM_7
NXF_NTF2
Motif
Other DBs
NCBI-GeneID:
128363217
NCBI-ProteinID:
XP_053180137
LinkDB
All DBs
Position
8:30136617..30152759
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AA seq
496 aa
AA seq
DB search
MVMEKPSAQLVGREFVRQYYTLLNQAPDYLHRFYGKNSSYVHGGLDSNGKPVEAVYGQSE
IHKRVMALSFRDCHTKIRHVDAHATLNEGVVVQVMGELSNNMQPMRKFMQTFVLAPEGTV
ANKFYVHNDVFRYQDEVFGDSDSEPPEESEDEVEEIEERVPSPDVAQEESAPFYDPSSCS
EPTVPGDDEEVAASPEPEPEAEKEAEAAVVELKSETMLESEVDGNIPDDQTEKSPAVAAP
TAEPAAVPTEPTPAAPEENRPFSWASVTSKNLPPSGAVPVSGLSPHVVKVPPTAPPRVEA
KSETQTTTTRPQRDQRPREQRPGGPPPVHRGPRPVREGEQGETEGRRVVRYPDAHQLFVG
NVPHDVDKTELKEFFEQYGTVLELRINSGGKLPNFGFVVFDDSEPVQKILSNRPIKFRGD
VRLNVEEKKTRSAREGDRRDVRPRGPGGPGGPRERIGGGGGGPRGPSARGGMAQKPSFGS
GRGAGPNEGRYSTQRQ
NT seq
1491 nt
NT seq
+upstream
nt +downstream
nt
atggtgatggagaagccaagtgcccagctggtcgggcgagagtttgtccgacagtattac
acactcctgaaccaggcccccgactacctgcacaggttttatgggaagaactcgtcctac
gttcacggcggcctggacagcaacggcaaaccagtcgaagctgtttatggacaatctgag
atccataagagggtgatggctctgagtttccgcgactgtcacacaaagatccggcacgtg
gacgctcacgccaccctgaacgagggcgtggtggtgcaggtgatgggcgagctgtccaac
aacatgcagcccatgaggaagttcatgcagaccttcgtgctggcgcctgagggaaccgtc
gccaacaaattctacgtccacaacgacgtgtttcgttaccaagacgaagtgttcggagac
tccgactcagagcctcctgaagagtctgaggacgaggtggaagagatcgaggagagagtc
ccctcccctgatgtagctcaggaggagtctgctcctttctacgacccgtcatcctgttcg
gagccgaccgttcccggcgacgacgaggaagtagctgcgagtcccgaaccagagcccgaa
gctgagaaggaagccgaagccgcagtggtagagctgaaatcggagacgatgctggaatca
gaagtagacggaaacatacccgacgaccagacagagaaaagccccgccgttgccgcgcca
accgccgaacccgctgccgtacccaccgaacccactcccgccgctccagaagaaaacagg
ccgttctcctgggcgtccgtcaccagtaagaaccttcctcccagcggagccgtgccagtc
tcaggactctcgccacacgtcgttaaagtccctcccacagcgccgcccagagtggaggcc
aagtcagaaacccagacaacaacaacacgaccacagagagaccagcggccgagggaacag
aggcctggaggtcctccaccggtacacagaggccccagaccagttcgtgaaggagagcag
ggagagacggagggtcgcagggtggtccgttaccccgacgcccaccagctgttcgttggt
aacgtccctcatgacgttgacaagacggagctcaaggagttctttgaacagtatggtaca
gtcctggagctgaggatcaacagcggcgggaaactaccaaactttggctttgtggtgttt
gacgactctgaacctgtacagaagatcctgagcaacaggcccatcaagttcagaggcgac
gtccgtctgaacgtggaggagaagaagacccggtcagccagggagggcgacaggcgggac
gtgaggccccgcggccccggaggtccaggcggccccagagaaagaataggaggcggtggc
ggcggcccccgaggaccctcagcccgcggcggcatggcacagaaacccagcttcggctcc
gggcgaggcgccggccccaacgagggtcgctactccacccagcgccaatga
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