Scomber japonicus (chub mackerel): 128363244
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Entry
128363244 CDS
T09718
Symbol
faf2
Name
(RefSeq) FAS-associated factor 2
KO
K18726
FAS-associated factor 2
Organism
sjo
Scomber japonicus (chub mackerel)
Brite
KEGG Orthology (KO) [BR:
sjo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
sjo03019
]
128363244 (faf2)
Messenger RNA biogenesis [BR:
sjo03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Ran-mediated transport factors
128363244 (faf2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UBA_8
FAF1
UBA_4
UBX
Thioredoxin_7
PFF1_TM
LIM_bind
TAP_C
DUF5401
Motif
Other DBs
NCBI-GeneID:
128363244
NCBI-ProteinID:
XP_053180168
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All DBs
Position
8:11864898..11873255
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AA seq
445 aa
AA seq
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MAAPEEPELSQAQTEKLLQFQDLTGLESMDQCRRTLEQHNWNIEAAVQDRLNEQEGVPSV
FNPPPSRPLQVNTADHRVYSYIVSRPQPRGLIGWSYYLIMLPFRFTYYTLLDIFRFALRF
IRPDPRGRVTDPVGDVVSFIHSFEEKYGRSHPVFYQGTYSQALNDAKRELRYLLVYLHGE
DHQDTDEFCRSTLCTEEVIAFLNTRMLFWACSTSKPEGYRVSQALRENTYPFLAMIMLKD
RKMTVVGRLEGLIQPEDFINQLTFIMDANQTYLMSERLEREERSQTQVLRQQQDEAYLAS
LRADQEKERKKREEQEQRRQEEEKVRQSALAEERRRRTLEEEKERKSECLPPEPPSDDPE
SVKIVFKLPNDTRVERRFLFGQSLTVIYDFLFSLKETPEKFEIVTNFPRRVLPCLPTEEQ
PNPPTLKEAGLSRSEVLFVQDLTDD
NT seq
1338 nt
NT seq
+upstream
nt +downstream
nt
atggcggcgccagaggaaccagaattatctcaggcgcagactgaaaaactcctccaattc
caggacctgactggtttggagtcaatggaccaatgtcgtcgcacattagagcagcataat
tggaacatagaggctgcagtacaagacagacttaatgagcaggaaggagtgcccagtgtg
tttaaccctccaccatccagaccattacaagtcaatacagcagaccatagagtatatagt
tacatcgtctccaggccacaacccaggggtttaataggatggagttactacttgataatg
ctacctttcagatttacatattacacacttctggacatattcaggttcgccctgcggttc
atcaggccagatccccgtggtcgtgtgacagaccctgttggagatgttgtgtccttcatt
catagttttgaggagaagtatggacggtcacaccctgtgttttaccagggaacatacagc
caggcactgaatgatgccaaacgggagctccgctacctattagtgtaccttcatggggag
gatcatcaagacactgatgagttttgccgctccacgttatgtacagaagaggtcatagcc
ttcctcaacacacgaatgctcttttgggcatgctcaaccagcaagcctgagggctacaga
gtgtcccaagcattgcgggagaacacctacccattcctggccatgataatgctgaaggac
cgcaagatgacagtggtgggcaggcttgaaggtctcattcagccagaagacttcatcaat
cagctcaccttcatcatggatgccaaccaaacatatctgatgtcagagcgccttgaacgg
gaggagaggagccagacccaagtgctaagacagcagcaggatgaggcttacctggcctcc
ctccgtgctgaccaggagaaggagcgaaagaaaagagaggagcaggagcagcggaggcaa
gaagaggagaaagtcagacagagcgctctcgctgaggagcggagacgacgaacactcgag
gaggagaaggagaggaagtcagaatgtcttcccccagagccgccttcagatgatccagaa
agtgtcaaaatagtgtttaagctgcctaatgatacacgagtagagagacgattcctcttc
gggcagtctctgacggtaatatacgacttccttttctctttgaaagaaaccccagagaag
tttgagatagttacaaacttccctcgccgagtcttgccctgccttccgactgaagagcag
cccaaccctcccacactgaaagaggcgggactcagccgctccgaggtcctttttgttcag
gatcttacggacgattaa
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