Scomber japonicus (chub mackerel): 128363267
Help
Entry
128363267 CDS
T09718
Symbol
lrit3a
Name
(RefSeq) leucine-rich repeat, immunoglobulin-like domain and transmembrane domain-containing protein 3a
KO
K24491
leucine-rich repeat, immunoglobulin-like domain and transmembrane domain-containing protein
Organism
sjo
Scomber japonicus (chub mackerel)
Brite
KEGG Orthology (KO) [BR:
sjo00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
sjo04990
]
128363267 (lrit3a)
Domain-containing proteins not elsewhere classified [BR:
sjo04990
]
Fibronectin (FN) domain-containing proteins
Fibronectin type III domain-containing proteins
128363267 (lrit3a)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LRR_8
I-set
Ig_3
LRR_4
LRR_1
Ig_2
ig
fn3
LRR_5
LRR_14
C2-set_3
V-set
C2-set_2
Motif
Other DBs
NCBI-GeneID:
128363267
NCBI-ProteinID:
XP_053180191
LinkDB
All DBs
Position
8:complement(25453467..25458888)
Genome browser
AA seq
638 aa
AA seq
DB search
MHLLLYVHVLLCCLSMAHPFCPSQCTCVFHGRTDGAGSRSVLCNDPDMSDVPVNVPVDTV
KLRIEKTVVRRIPTEAFYYLAELRYLWITYNSISSVDSAGFYNLKVLHELRLDGNMISMF
PWESLKETPMLRTLDLHNNRLTNVPNEAIQYLFNITYLDLSSNKLATLPSDLMDIWPPFN
GAPITTNDSKVVLGIQDNPWFCDCKISKLIEISKMTNTPVVLMDLFLTCSGPENLAGVPF
QRAELENCVKPTVMTSATKITSPLGSNVLLRCDTTGYPTPNLYWAKTDGSPVNNTVQESP
GDGIRWSIMSLHGILYKDSGNYSCKAKNDAGSAEATISLMIAGGMTTIPPLKPTTGTGQT
SQGTTSTPLTDISSMPVTTTVLPRTSTTLSSAPKTPKTTPSNGLQRGSLKPSKSQQGGNG
RKLAADEKSKKTDVSKSVKDLKIVEETADTAVLLWTADGVPNESPLTVVYSPYDEDDSKM
TVETNAGSGKMLLEGLSSGMRYSVCLIAKGSTAGKDPCTDFYTLDNVEDGGQNQLFMIIS
AIACALILPLIALLIYKILALYCKGRSTALDEEELEKESYVKFETISMKQRTLNSHPTEL
WARRPTHDSERMLLCSRSSIDSQMTFKSDNSCRSEYLC
NT seq
1917 nt
NT seq
+upstream
nt +downstream
nt
atgcatctacttctctatgtgcatgtattactatgttgcctaagtatggctcatcccttc
tgtccatcccaatgcacctgtgtcttccatggacgtaccgatggcgcgggaagcagatct
gtactctgcaatgacccagacatgtctgatgttcctgtcaacgtccctgtggacacagta
aaacttcgtattgagaaaactgttgtacggcgaatcccaacagaagccttttactacttg
gcggagctacgatacttgtggattacttacaattccatatcatcagtggattctgcaggt
ttctacaatctcaaagtgctccatgagttgaggttggatggaaatatgatctccatgttc
ccatgggagtctctaaaagagacgcccatgctaaggacgttggatctacacaacaacaga
ctcaccaatgttcccaacgaggctatccagtaccttttcaacatcacctatttggatcta
tccagcaacaaattagccaccctgccctctgatctcatggatatatggcccccattcaat
ggagcaccaatcactacaaatgactccaaagttgtactaggcatccaagataatccctgg
ttctgtgactgtaaaatctctaaactgatagagatatccaaaatgactaacacaccagtg
gttttgatggacctattcctgacctgcagtggacctgagaatttggccggtgtccctttt
cagcgtgctgaacttgagaattgtgtaaagccgacagttatgacttctgcaaccaagatc
acatctcctttgggcagtaatgttctcctgcgatgtgataccacaggatacccaacacca
aatctctactgggctaagacagatggctcacctgtcaacaacacagtccaggagtcgcct
ggggatggcatcagatggtccatcatgagtttgcatggaatattgtacaaggactctggg
aactacagttgcaaagctaagaatgatgctggcagtgcagaagcaaccatttccctcatg
attgctggtggcatgaccaccatcccaccactgaagcctaccactggaactggacaaacc
agccaaggcactacatctactcccctaacagacatttccagcatgcctgtcacaaccacg
gtccttccaagaacatcaacaacactatcttctgcccctaagacgccgaaaactactccc
agcaacggtctacagagaggttccttgaaaccttcaaagagccaacaaggaggtaatggg
agaaagcttgcagcagatgaaaaaagcaagaaaactgatgtctcaaagtctgtcaaagac
ctaaagattgtagaagaaacagctgacactgcagtgttgctctggacagcagatggggta
ccaaatgaatctccactcacagttgtatattccccttatgatgaggatgacagcaaaatg
acagtggagactaatgctggtagtggaaaaatgttgctagagggactatcgtctgggatg
aggtactcagtttgcctcatagctaagggtagtacagcaggtaaagatccttgcactgac
ttctacacactggataatgttgaggatggtgggcagaaccagcttttcatgatcataagt
gccattgcctgtgctttgattttgcctcttattgccctgttgatttataagattctcgct
ctctactgcaaggggcgcagcacagctttggatgaagaggagcttgaaaaagagagctac
gtcaagtttgagacaatttcaatgaaacaaaggaccttgaactctcacccaactgagctt
tgggccaggagaccaacccatgactcagagcgaatgctcttgtgctccaggtcaagtatt
gactcccagatgacctttaagagtgataacagttgccgttctgagtatctctgctga
DBGET
integrated database retrieval system
