Scomber japonicus (chub mackerel): 128363370
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Entry
128363370 CDS
T09718
Symbol
gabrb2a
Name
(RefSeq) gamma-aminobutyric acid receptor subunit beta-2a isoform X1
KO
K05181
gamma-aminobutyric acid receptor subunit beta
Organism
sjo
Scomber japonicus (chub mackerel)
Pathway
sjo04080
Neuroactive ligand-receptor interaction
sjo04082
Neuroactive ligand signaling
Brite
KEGG Orthology (KO) [BR:
sjo00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04080 Neuroactive ligand-receptor interaction
128363370 (gabrb2a)
04082 Neuroactive ligand signaling
128363370 (gabrb2a)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
sjo04040
]
128363370 (gabrb2a)
Ion channels [BR:
sjo04040
]
Ligand-gated channels
GABA-A
128363370 (gabrb2a)
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Neur_chan_memb
Neur_chan_LBD
OAD_gamma
Motif
Other DBs
NCBI-GeneID:
128363370
NCBI-ProteinID:
XP_053180331
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Position
8:14283204..14312244
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AA seq
529 aa
AA seq
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MGRIRKNHFGILTFSLLVTFVWAQSVKDMKDPSNMPLVKETVDRLMKGYDIRLRPDFGGA
PVAVGMNIDIASIDMVSEVNMDYTLTMYFQQAWRDKRLSYSEIAYNLTLDNRVADQLWVP
DTYFLNDKKSFVHGVTVKNRMIRLHPDGTVLYGLRITTTAACMMDLRRYPLDEQNCTLEI
ESYGYTTDDIEFYWRGGDGAVSGVDRIELPQFSIVDYKLISKNVVFSTGSYPRLSLSFKL
KRNIGYFILQTYMPSILITILSWVSFWINYDASAARVALGITTVLTMTTINTHLRETLPK
IPYVKAIDMYLMGCFVFVFLALLEYAFVNYIFFGQGPQRQKKAAEKAATANNEKLRPDPN
KWLVGNVVQRDDALYARMKQREIDAYDSMWDPIFVDDAALGLGEQRNKVLEMTPDDNILF
STLEMKNEMGGAGDLSRGLGAPGDPRNTMLAYDSSTLQYRRAAMARQNYGHSALERHAQK
KSRLRRRASQLKVNIPDLSDVNSIDKWSRMIFPTVFSFFNVVYWLYYVH
NT seq
1590 nt
NT seq
+upstream
nt +downstream
nt
atggggaggatcaggaaaaatcactttgggattttgactttttccttactcgtgactttt
gtctgggctcaaagcgtcaaggatatgaaagatccaagcaatatgcctctggtaaaagag
acagtggacagactgatgaaaggatacgacattcggttgaggccagattttggaggtgcg
ccggtggcggtgggaatgaatatagacatagccagcatagacatggtgtctgaagtcaat
atggactacaccttgacgatgtacttccagcaagcatggcgggacaagcgtctatcctac
tctgagatcgcctacaacctgactctggataacagagtggctgaccagctgtgggtgcct
gacacctacttcctcaacgacaagaagtcctttgtccacggcgtcacagtcaagaacagg
atgatccgtctccacccagatggcacagtgctttatggactcaggatcaccacaactgca
gcctgcatgatggacctgcgccgctaccctctagacgagcaaaactgcaccctagagatc
gaaagctatggctacaccactgatgatatcgagttttactggcgaggcggagatggcgct
gtgtccggggtcgacagaatagagctgccacagttctctattgtcgactataaactcatc
tccaagaatgtggtcttctctacaggttcctacccccgcctgtccctcagtttcaaattg
aagaggaacattggttacttcatcctgcagacatacatgccttccatcctgattaccatc
ctctcctgggtctccttctggatcaactatgacgcctccgctgccagagtggccttgggg
atcactacggtgctgaccatgaccaccatcaacacccacttgcgagagacgctccctaag
atcccctacgtgaaggctattgacatgtacctgatggggtgctttgtgtttgtcttcctg
gccctgctggagtatgcctttgtcaactacatcttcttcggccagggccctcagcgacag
aagaaggcggctgagaaagcagccacggccaataacgagaagctgagacccgaccccaac
aagtggctggtgggaaatgtagttcagagagatgatgctctgtatgccagaatgaaacag
agggaaattgacgcatatgactcgatgtgggatcccatctttgtggacgatgccgcatta
ggactaggcgagcaaagaaataaggtactggagatgactcctgatgacaacatcctgttc
agcaccttggagatgaagaatgagatgggtggtgccggggatctgtcccggggcctggga
gcacccggagacccccgcaacaccatgctggcctatgatagctcgacattgcagtaccgc
agggcagccatggcccgccagaactatggccacagcgccttggagcgccacgcccagaag
aagtcacgcctacggagacgggcctcccagctcaaggtgaacatcccagacctgtccgac
gtgaactctatcgacaagtggtccaggatgatcttccccaccgtcttctccttcttcaac
gtggtctactggctatactacgtccattaa
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