Scomber japonicus (chub mackerel): 128363386
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Entry
128363386 CDS
T09718
Symbol
cnot7
Name
(RefSeq) CCR4-NOT transcription complex subunit 7
KO
K12581
CCR4-NOT transcription complex subunit 7/8
Organism
sjo
Scomber japonicus (chub mackerel)
Pathway
sjo03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
sjo00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
128363386 (cnot7)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
sjo03019
]
128363386 (cnot7)
Messenger RNA biogenesis [BR:
sjo03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
128363386 (cnot7)
mRNA degradation factors
3'-5' decay
Ccr4-NOT complex
128363386 (cnot7)
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SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
CAF1
Motif
Other DBs
NCBI-GeneID:
128363386
NCBI-ProteinID:
XP_053180353
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All DBs
Position
8:complement(9659558..9664826)
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AA seq
286 aa
AA seq
DB search
MPAATVDHSQRICEVWANNLEEELKRIRHVIRKYNYIAMDTEFPGVVARPIGEFRSNADY
QYQLLRCNVDLLKIIQLGLTFMNEQGEYPPGTSTWQFNFKFNLTEDMYAQDSIELLTTSG
IQFKKHEDEGIETLYFAELLMTSGVVLCDGVKWLSFHSGYDFGYLIKILSNANLPEEEVD
FFEILRLYFPVIYDVKYLMKSCKNLKGGLQEVAEQLELERIGPQHQAGSDSLLTGMAFFK
MREMFFEDHIDDAKYCGHLYGLGSGSAYVQNGTGNAYEEEANKQQS
NT seq
861 nt
NT seq
+upstream
nt +downstream
nt
atgcccgcagctactgtggatcacagccaaagaatatgtgaggtgtgggctaacaacttg
gaggaggagctgaagaggatacgacatgtcatccgaaaatacaactacattgctatggac
acagagtttccaggtgtagtagccagaccaattggagagttcaggagcaacgccgactat
cagtaccagttactgcgctgcaatgtggatttgctcaagataatccagctgggcctcaca
tttatgaatgaacaaggggaataccctccaggaacatcaacatggcagttcaattttaag
tttaacctcacagaggatatgtacgcacaggactccattgagctcctgaccacttcaggg
attcaattcaagaagcacgaggacgaaggcatcgagacgctgtactttgccgagctgctg
atgacatcgggagtggtgctctgcgacggggtcaagtggctgtcgttccacagtggctat
gacttcggatacctgatcaagattctgtccaacgctaacctgcctgaggaggaggtggac
ttctttgagattcttcgcttgtactttccggtcatttatgacgtcaagtacctcatgaag
agctgcaaaaacctgaaggggggactgcaggaagtggctgaacagctggaactggagagg
atcggcccgcagcatcaggccggctctgactctttactcacaggcatggctttcttcaag
atgagagagatgttctttgaggatcatattgacgatgcaaagtactgtggtcacttgtac
gggctcggctccggctccgcctacgtccagaacggaacagggaacgcttacgaagaggag
gctaacaagcagcagtcgtga
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