Scomber japonicus (chub mackerel): 128363468
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Entry
128363468 CDS
T09718
Symbol
usp8
Name
(RefSeq) ubiquitin carboxyl-terminal hydrolase 8 isoform X1
KO
K11839
ubiquitin carboxyl-terminal hydrolase 8 [EC:
3.4.19.12
]
Organism
sjo
Scomber japonicus (chub mackerel)
Pathway
sjo04137
Mitophagy - animal
sjo04144
Endocytosis
Brite
KEGG Orthology (KO) [BR:
sjo00001
]
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
128363468 (usp8)
04137 Mitophagy - animal
128363468 (usp8)
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
sjo01002
]
128363468 (usp8)
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
sjo04131
]
128363468 (usp8)
04121 Ubiquitin system [BR:
sjo04121
]
128363468 (usp8)
Enzymes [BR:
sjo01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.19 Omega peptidases
3.4.19.12 ubiquitinyl hydrolase 1
128363468 (usp8)
Peptidases and inhibitors [BR:
sjo01002
]
Cysteine peptidases
Family C19: ubiquitin-specific protease family
128363468 (usp8)
Membrane trafficking [BR:
sjo04131
]
Endosome - Lysosome transport
Others
Others
128363468 (usp8)
Ubiquitin system [BR:
sjo04121
]
Deubiquitinating enzyme (DUB)
Ubiquitin-specific proteases (UBPs)
UBP/USP
128363468 (usp8)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
UCH
USP8_dimer
WW_USP8
UCH_1
Rhodanese
Motif
Other DBs
NCBI-GeneID:
128363468
NCBI-ProteinID:
XP_053180446
LinkDB
All DBs
Position
1:29006103..29019061
Genome browser
AA seq
1084 aa
AA seq
DB search
MPAVSTEVKELYLSTSLGELNKKAEIKPDKISTRSYVQSACKIFKAAEECRLDRDEEKAY
VLYMKYLTVYDLIKKKQDFKQQPEYYMTMLGTTSFKRAIEEAEKLSESLKLRYEEVEVRK
KLEEKERQEEKKRRDEMSEKDGGRGSPKASSANKKDSKKVKGEQNELKNATSKAAVQPGG
ITAEKLFNMMKDQTITMIVMDARSRTDFEESHIQVPAQTCISVPEEAISPGITVNQIEAK
LPEASKEQWRQRGLVDYIVLLDWFSSVTDLTLGTTLQSLKDALFKWDSITILRSEPMVLE
GGYENWLLFYPMYTTNAKVRPPRQNIASTLPQLNFSYPSLEEPKPPSPPPPEPEVKPELQ
ELSAPPLVNGVAPAEVPTPTMSVGTDRLPDNVDSPVSGSTNSGLDLNKKRPVVEPAATAK
AYPQFDRTKKPSVRVSDEPKPSQNGSDKDSTQNGPVIPNRSGKPAFGPNTSLSKEEQSQI
HSEAVAVMEKARQEQEKRTQERRLEEERREKERKERELKEREESEKRRKEEEEKRHQEKK
RLERQKAEEEDDKENRVWDEKERRGKEQNSDTPSKSMSLDSPAPNHAVSEIKREPLTRAR
SEEMGRSVPGLPVGWMKFLDTVTGTYRYYHSPTNRVHLYPPEVTVPQTPPSTPPTVKQKQ
PRPAEPDPNRDREREQSKLKRSYSSPDISQDLREEAQKKATAPTTAAVIPTINRETKPAT
PKVYSKVEIARPSAAKIRNLNPTFGGLGASFTGLRNLGNTCYMNSILQCLCNTPAMADYF
NNNYYMEDINRSNILGHKGEVAEEFGVIMKALWAGLYKCISPRDFKITIGKINEQFAGYD
QQDSQELLLFLMDGLHEDLNKADNRKRYKEEDNDHLDDQTAADVAWNKHKLLNESIIVAL
FQGQFKSTVQCLTCHRKSRTFETFMYLSLPLASTSKCSLQDCLRLFSKEEKLTDNNKVFC
RHCKAHRDSTKKLEIWKVPPIVLVHLKRFSYEGRWKQKLQTYVDFPLDSLDLAQYVIGPK
QTMKRYNLYGVSNHYGGLDGGHYTAYCKNSIKQRWYKFDDHEVSDISTSTVKSSAAYILF
YSSL
NT seq
3255 nt
NT seq
+upstream
nt +downstream
nt
atgcctgcagtgtccaccgaggtgaaggagctgtatctgtccacatctctgggggagctg
aacaagaaggctgaaatcaagccggacaagatcagcaccagaagctatgttcagagtgcc
tgtaaaatattcaaggcggcagaggagtgtcgtctggacagagatgaggagaaagcttat
gtactgtacatgaagtatttaacagtatatgacctcatcaagaaaaaacaagacttcaag
cagcaaccggagtattacatgaccatgctggggacaaccagctttaagagggccattgaa
gaagcagagaaactctccgaaagccttaaactcaggtatgaagaagttgaggttcgaaaa
aagctggaggagaaggagagacaagaggagaagaaaagaagggatgaaatgagtgagaaa
gatggtggtcgaggctctcccaaagcgtcatcagccaacaagaaggacagcaaaaaggta
aaaggagagcagaatgagcttaagaatgcaacttcaaaagcagcggtacagcctggtggc
atcacagctgagaaacttttcaatatgatgaaggaccagacgattacaatgattgtaatg
gatgcgcgaagccgcacagactttgaggagtctcacattcaggtcccagctcagacctgc
atcagcgtgcctgaggaggctatcagcccaggaatcactgtgaatcaaattgaggcaaag
ctgccagaagcatccaaagagcagtggaggcagcggggattggtggattatatagtcctg
ctagactggtttagttctgttactgaccttacactgggcaccaccttgcagagcctcaaa
gatgccctgtttaagtgggacagcatcaccatcctgcgtagtgagccaatggtgctggag
gggggctacgagaactggctcctgttttaccccatgtacacaaccaacgctaaagttcgg
ccacctagacaaaacatagccagcaccctccctcagttaaacttcagttacccatccctt
gaggagccaaagcctccaagcccacctccaccagagcctgaggttaaacctgaactgcag
gagctctcagctcctccactggtgaacggagttgctccagcggaagtccccacacctaca
atgtctgtgggtactgacagattaccggacaatgttgattcccctgtctcaggctccaca
aactctgggctggacctaaataaaaagcgacctgtggtagagccagctgccacagccaag
gcctacccacagtttgaccgtaccaagaaaccctctgtgcgagtgtcagatgagccgaaa
cccagccagaatgggtcagacaaggactccacccagaacggcccagttatccccaaccgc
tcaggcaaaccagccttcggccccaacacttctctgtctaaagaagaacaaagtcagata
cactctgaggcagtggcagtaatggagaaggcgcgacaagagcaggaaaaacgcacccaa
gagcggcgtctagaggaggagaggcgggagaaggaacggaaggagagggagttgaaggaa
agggaagaaagtgagaagaggaggaaggaagaagaggagaaaagacatcaggagaaaaag
agactggagaggcagaaggcagaagaagaggatgacaaagagaacagggtgtgggacgag
aaagaaaggaggggaaaagagcagaactctgacacaccctcaaagagtatgtctctggac
tcgcctgcgcccaaccatgctgtcagtgaaataaagagggagcccctgaccagagcaaga
agtgaggagatgggtcggagtgtgccaggcctgccagtcggttggatgaagttccttgac
accgtgacagggacctacagatattaccattccccaacaaaccgcgtccacctgtacccc
cctgaagtcactgttcctcagaccccaccctctacaccgccaacagtcaaacagaagcag
ccacgaccagctgagccagaccccaaccgcgaccgagagcgggaacaatccaaattaaaa
cgctcctactcctcccctgatattagccaggacctgagagaggaggcccagaagaaggct
acggccccgaccactgctgctgtcatacccaccatcaacagagagaccaaacctgccact
cctaaagtctattctaaagtggagattgcccgaccgtcagctgctaaaatccgcaacctg
aatcctacatttggaggtctgggtgcatccttcactggccttcgtaacctcggcaacaca
tgctatatgaactccatcttgcagtgcctgtgtaacactcctgccatggctgattacttc
aacaataattattacatggaggacatcaacagatccaacatccttggccataagggagag
gtggcagaagagtttggtgtgatcatgaaggccctgtgggctggtctgtacaagtgcatc
agtccgcgggacttcaaaatcaccatagggaagatcaatgagcagtttgctggttatgac
cagcaagactctcaggagctgctgctgttcctcatggatgggctccacgaggacctcaac
aaggcggataacaggaagcggtacaaggaagaggataacgaccatctggacgatcagaca
gcggccgacgtggcctggaacaaacacaagctgctgaacgagtccatcattgtagcgctg
ttccaggggcagttcaagtccaccgtgcagtgtctgacctgccaccgcaagtccagaacc
tttgagaccttcatgtacctgtcgctgcctctggcctctaccagcaagtgctccctgcag
gattgtctgaggctgttctccaaggaggagaagctgacagataacaacaaggtgttctgc
agacactgcaaagctcacagagattccaccaagaaactggagatctggaaggtccctccc
attgtcctcgtgcacctgaaacgcttctcctatgagggccgatggaagcagaagctgcag
acatatgtcgactttcctctagacagtctggatctggcccagtacgtcattggacccaag
cagaccatgaagagatacaacctctatggagtgtctaaccactatgggggcttagatggt
ggccattacacagcctactgtaagaacagcatcaaacagcgctggtacaagtttgatgac
cacgaggtgtccgacatctccacctccaccgtcaagtcctccgcagcctacatcttgttt
tactcctccctgtga
DBGET
integrated database retrieval system
