Scomber japonicus (chub mackerel): 128363489
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Entry
128363489 CDS
T09718
Symbol
uvssa
Name
(RefSeq) UV-stimulated scaffold protein A isoform X1
KO
K23720
UV-stimulated scaffold protein A
Organism
sjo
Scomber japonicus (chub mackerel)
Pathway
sjo03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
sjo00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
128363489 (uvssa)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
sjo03400
]
128363489 (uvssa)
DNA repair and recombination proteins [BR:
sjo03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
Other TCR factor
128363489 (uvssa)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UVSSA_N
DUF2043
LBD_receptor
Rieske
INTS1_R4
Motif
Other DBs
NCBI-GeneID:
128363489
NCBI-ProteinID:
XP_053180473
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Position
8:2177029..2211190
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AA seq
773 aa
AA seq
DB search
MELSQRDRLSELVEELTTSGQQQLNQDKMKEIKKICKVSNDCIDHVYHTLMSQLNQEHAE
IRLSAFQITSELFTRSHHFRTLLVDNFQEFLELTVETDSELPLPPPKEVARKLRALAIQT
VQSWQASYGTAYKKLALGYHFLKQVKKVDFQDAEARTVTERRREEERQRKMQRIYKERVE
AATNDMEEAQQDIEATLTEMDSCMKLLLPRFDHTDVQTTESSSSNSQPADELTPDDEQPC
CSKDLQDDKKEEKTQGIDKGGTEEKGDNRGSKKAKEKKEKSSEDEEEEQKREMDEGQREG
GEEEEEEDDDDEESSEEEEEESRELFIRNSGLISHSYNLDLNLSAGLHVSETEDNEAVVS
TVIDLHKLITTKHLPAVQGWVQVFTKSGAEEQLLRRALDLKKSLEAALQKHNELHIDYKT
RIRKVLKASSDAEDSDDDDDDFDEVPEKEGYEPHIPEHLRAEYGLDPSPSTSAAPVPKKT
PVKRPAAPARPPSSSSSSSASFSTRRLKRLIEQEEEDPTCAAATMRLLRQKVPLPAEPAQ
SSSTSSGPSSSQSTSDQNPVDAPVVPFGLDLYYWGQEQPNAGKIIKSASAHQFWVPISME
EEVDNEEMLAESKSRYITFPGRFIPVSHHCRAPLQNGQLCQRQDRVKCPFHGPIIPRDDQ
GRPSREEDRRREEKEERRKLEEQSDLWDAEMMREIELATGTDLGSESLGKKKKGKKKKYP
NLSDLKQNANTARSRLEKKVFNKGSMRRVADALSKSDRRKHEKFSNQFNYALN
NT seq
2322 nt
NT seq
+upstream
nt +downstream
nt
atggagctgtctcagagggacaggctgtcggagctggtggaggagctgaccacatcagga
cagcagcagctcaatcaggacaagatgaaggaaatcaagaagatctgcaaagtgtctaat
gactgcatagaccacgtttaccacacgctgatgtctcagctcaaccaagaacacgccgag
atcagactgtcagccttccagatcaccagcgagctcttcaccaggtcccatcacttcaga
accctgctggtggacaacttccaggagttcttggagttgaccgtagagacggactcggag
ctgcctctccctcctcctaaagaagtagccaggaagctgagggcgctggccatccagact
gtccaatcgtggcaggcctcttatgggacagcgtataagaagctggcattgggctaccac
ttcctcaaacaggtcaagaaggtggacttccaggatgctgaggccaggactgtaacagag
aggaggagggaggaggagagacagaggaaaatgcagaggatttacaaggagagagtggag
gctgccaccaatgacatggaggaggcacaacaggatatagaggccacactgacagagatg
gattcctgtatgaagctgctgctccctaggtttgaccacacagatgtccagacaaccgaa
agcagctcttcaaactcccaaccggccgatgagctcacacctgacgatgaacagccctgc
tgcagcaaagacctgcaggatgacaagaaagaagagaagacacaagggatagacaaagga
gggacagaggaaaagggggacaacagggggagtaaaaaagcaaaggaaaagaaggagaaa
agctctgaagacgaggaggaagagcagaagagagagatggatgaagggcagagggaggga
ggggaggaagaagaagaagaagatgatgatgatgaggaaagtagtgaagaagaagaggag
gagtctcgtgagttgtttattcggaactctgggctcatctctcattcatataatctggac
ctgaacctcagtgctggtcttcatgtgagcgagacggaggataacgaggcagtagtttcc
acggtgatagacctccataaactgataacaaccaaacacctgccagcagtgcaaggctgg
gtccaggtcttcaccaagtccggtgctgaggagcagctgctgaggagagcgctggatctg
aagaagtctttagaggccgccctgcagaaacacaacgagcttcacatcgactacaagacc
aggattcgaaaagtgcttaaagcttcttcagacgcagaggacagcgatgatgatgatgat
gattttgacgaggtaccagagaaagaaggatatgagccacacattcctgagcatctccga
gccgagtatggtttggatccctctccttctacctcagcagcgcccgtcccaaaaaagact
cctgttaaaagacctgctgctccagcccggcctccatcctcctcctcctcctcctccgcc
tctttctcaaccaggagattgaagagacttatagaacaggaggaggaggacccaacctgt
gctgctgccacgatgcgcctcctcagacagaaggttcctctgccagcagagccagcacag
tccagcagcacctcctctggtcccagttcatcccagtccacttcagaccagaaccctgtg
gatgctcccgtggttcctttcggtttggacctgtactactggggtcaggagcagcccaac
gccggcaagatcatcaagtctgcctcggcgcatcagttctgggttcccatcagcatggag
gaggaggtggacaacgaggagatgctggcagagagcaagagcagatacatcaccttccca
ggaagattcattcctgtcagccatcactgcagagcaccactgcaaaacggacagctgtgt
cagagacaggaccgggtcaagtgtccttttcacgggcccatcatcccacgagacgaccag
ggtcgacccagcagggaggaggaccgacgcagggaggagaaggaggagaggaggaaacta
gaggagcagtcagacttatgggacgcagagatgatgcgagagatcgagctggcgacagga
acggacctgggttctgaaagtctgggtaaaaaaaagaaagggaagaagaagaaatacccc
aacctgagtgatctgaagcagaatgccaacacggctcgctccagactggagaagaaggtc
ttcaacaagggctccatgcgcagagtagcagacgccttgagcaaatcggaccgcagaaaa
catgaaaagttctccaaccagttcaactacgccctcaactga
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