Scomber japonicus (chub mackerel): 128364113
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Entry
128364113 CDS
T09718
Symbol
si:dkey-13n15.2
Name
(RefSeq) protein transport protein Sec24C
KO
K14007
protein transport protein SEC24
Organism
sjo
Scomber japonicus (chub mackerel)
Pathway
sjo04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
sjo00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
128364113 (si:dkey-13n15.2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
sjo04131
]
128364113 (si:dkey-13n15.2)
Membrane trafficking [BR:
sjo04131
]
Endoplasmic reticulum (ER) - Golgi transport
Forward pathways
Coat protein complex II (COP-II)
128364113 (si:dkey-13n15.2)
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Paralog
Gene cluster
GFIT
Motif
Pfam:
Sec23_trunk
Sec23_helical
Sec23_BS
zf-Sec23_Sec24
Gelsolin
DUF4809
VWA_2
Motif
Other DBs
NCBI-GeneID:
128364113
NCBI-ProteinID:
XP_053180588
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Position
9:10647400..10702209
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AA seq
751 aa
AA seq
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MAEDRAEWEGKVFVSEPFSRLPPLATTSCIIEDRGNASPCVIRSTSYCVPCEGQTALLSR
LPLGALVTPLAKQNAKEKPLPLCKEPECIVGCCLCGASMCPAMGWQDCGQRFYCPFCGKL
NEVSWQHYQPTKGAVGVRVDNDQRPELHMGSYEILSSQKGEPAALILAIDVSASALRGGH
LEFVTQQIHTLLTSLSREDGDVRIGLMTYDSRIHLFDLSPVLSRPHMLVITEKEDLQLPV
REGLLVSVKDCIESVDSVLQLIPQFSPECDHSSGVPMDLPIKAGLAVLQALSSPGKLLIF
HTAPLIEMGHTHSSSGFFGSNKPKSIFQPSEPAVSLAKECVRQGCGVHLFVLSQQDVGGA
WPGHIPYLTGGALYTYSHLQGELDKERFSTSLKRIVETDTGYKAELRIFVSKDLRVSGCY
GLFVPGPSPSQVTMATLDWQTTLAVELAHSRALDPTRGVAIQVVLSYSSQSGDRRTRVHT
VTLRCSPHLQEAFRHCQAQTLLAFYCKKMYCAALERPLQELREELQTEVTEALASYRKHC
CSASVSSGQLVLPQYLRALPVYINSLRKSEVLLPGLRSSVHQRLQQRCQVLGMDTFTNAT
HFYPLLLPLPLSADGSSPLNPEEVLRCCAASLEPRGLYLVHAPLTLLLWVGSQVPTCTLV
ELFNTSCFSSLPSGETKLPALENPLSISIRSLINTLNSQVHCARKLWVVKQGDACEETLQ
RHLVEDKSPNGGASYADFLYHLHVNSIRALQ
NT seq
2256 nt
NT seq
+upstream
nt +downstream
nt
atggcagaggacagggcagagtgggaggggaaggtttttgtctctgagcctttttcccgt
cttcctcctcttgcaactacttcctgtatcatagaggacagaggtaatgcaagtccttgt
gtcatccgctccacttcatactgtgtgccctgtgaaggtcagacggccctactcagccgt
ctaccgctgggggctttggtcaccccactggctaaacaaaatgctaaagagaagcccttg
ccactgtgcaaagagccagagtgcattgtgggttgttgcttgtgtggggcctctatgtgc
cctgctatgggctggcaggactgtggtcagaggttttactgccctttctgtgggaaactc
aacgaagtgtcgtggcaacactatcagccgaccaaaggagcggtcggggttcgggttgat
aacgaccagaggcctgaacttcatatggggtcgtatgagatcctcagctctcagaagggt
gaacctgctgcgctgattctagctatagatgtgtctgcttcagcactgagaggaggacat
ttggagtttgtaacacaacaaatacacactctgctcacctctctgagcagggaggatggt
gacgtccggattggtttgatgacgtatgacagcaggatccacctgtttgacctcagccct
gtcctttcacgcccgcacatgttggtcatcacagagaaggaagacctgcaacttcctgtg
agggaggggcttctggtgtccgtgaaagactgtatagagagcgttgacagtgtgctgcag
ctcattcctcagtttagtcctgagtgtgatcactccagtggagttcccatggatctgcct
atcaaagcaggactggctgtactgcaggccttgagttctcctggaaagttgctcatcttc
catactgcccctctgatagagatgggacacacacactcctcctcagggttctttggctcc
aataaaccaaagtccatctttcagccgtcggaaccagccgtctcattggccaaggagtgc
gtccgtcagggctgcggcgttcacctgttcgtcctctcccagcaagacgtgggcggtgcg
tggccgggccatattccatatctaacaggtggagctctgtacacttacagccacctgcag
ggagaattggacaaggagcgttttagcaccagtctaaaaaggatcgtagagacggacaca
ggctacaaggctgaactcaggatttttgtcagtaaagatttgcgtgtgtccggctgttat
ggactgtttgtccctggtcctagtccaagccaggtcaccatggcgacgctcgattggcag
acaacactggctgtggagctcgcacactccagagctctggatccgacgagaggtgtagcc
atacaggttgtgttgtcgtacagcagtcagtcaggagacaggaggaccagggttcacact
gtgactctgagatgctcaccccacctacaggaagctttccgacactgccaggcccaaaca
ctactcgccttctattgcaagaagatgtattgtgccgcgttggagcgccctctacaagag
ctgagggaggaactgcagacggaggtaacagaagcattggcatcttaccgaaaacactgc
tgctctgcttcagtgtctagtggacagctcgtccttcctcagtacctgcgagctctcccc
gtttacatcaacagtttgaggaagagcgaggtgctgctgccaggcctgcggagctccgtc
caccagcggctgcagcagcgttgccaggtgctcggcatggacaccttcaccaacgccaca
cacttctaccctctgctgttgcctctgccactgtcagctgatggctcaagccctttaaac
ccagaggaggtgctgcgctgctgtgccgccagcctggagcccagaggtctgtatttggtc
cacgcacccctcaccctgctgctctgggtgggcagccaagttccgacatgcaccctggtg
gagctcttcaataccagctgcttctcctcgctgccctctggagagaccaaactgcctgct
ctggaaaaccctctgtccatcagtattcgatcactcatcaacacactgaactcccaggtg
cactgcgcccgcaagttgtgggtggtgaagcaaggcgacgcctgcgaggagactcttcag
cgccacctggtggaagacaagagtcctaatggaggagcatcctacgcagacttcctctac
catctccacgtcaactccatccgagcactgcaatga
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