Scomber japonicus (chub mackerel): 128364238
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Entry
128364238 CDS
T09718
Symbol
barhl1a
Name
(RefSeq) barH-like homeobox 1a
KO
K09360
BarH-like
Organism
sjo
Scomber japonicus (chub mackerel)
Brite
KEGG Orthology (KO) [BR:
sjo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
sjo03000
]
128364238 (barhl1a)
Transcription factors [BR:
sjo03000
]
Eukaryotic type
Helix-turn-helix
Homeo domain ANTP: NKL
128364238 (barhl1a)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Homeodomain
Homeobox_KN
DUF7645
Motif
Other DBs
NCBI-GeneID:
128364238
NCBI-ProteinID:
XP_053180754
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All DBs
Position
9:1460060..1465750
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AA seq
302 aa
AA seq
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MDVSSSGCSTFLIDSLLSLRPPAALLSRAEAPELSPSSSSSTGSSSSTGGGSAPPSPRRE
PIPRLESALLPGQLQHRSASFLIRDILADCRPYSDPGQVCSDPGQPYPDPGQVCSDPGQV
YSDPGQSELDFSAPLSSSSSDSESRGKNLQSGPDGAAGRLKKPRKARTAFSDQQLAKLEK
SFHQQKYLSVQDRMELAASLQLSDTQVKTWYQNRRTKWKRQSAVGLEFLAEAGRMFLPSP
FLFPPAPPSLDLYLYRGHAPHLLPRLLTHTELVPDWFPTGSRLVPDWFLTGSRLVPDWIK
TL
NT seq
909 nt
NT seq
+upstream
nt +downstream
nt
atggatgtttcctcctccggctgctccacgttcctcatcgactccctgctctccctcagg
ccgcccgcagcgctcctctcccgggcagaggctccggagctcagcccgtccagctccagc
agcaccggcagctccagcagcaccggcgggggctcggcgcctccttccccgcgcagagag
cctattcctcggctagagtctgcgctgctgcccggtcagctgcagcaccgctccgccagc
ttcctgatccgggacatcttagcggactgccggccctactctgacccgggacaggtctgc
tctgacccgggacagccttaccctgacccgggacaagtctgctctgacccgggacaggtc
tactctgacccgggtcagtccgagctggacttctcggctcctctcagcagctcttcttct
gacagcgagtccagaggtaaaaaccttcagtcagggccggacggagctgcagggcgtctg
aagaagcctcgtaaagctcgcacggcgttcagcgaccagcagctggcgaagctcgagaag
agtttccatcagcagaaatatctgagtgttcaggaccgaatggagctcgctgcgtccctg
cagctcagcgacacgcaggtcaagacctggtaccagaaccgcaggacgaagtggaaacgt
cagtcagctgttggtttggagtttctggctgaagccggcaggatgttcctaccgtcgccc
ttcctgttcccccccgccccccccagcctggacctctacctgtaccgaggccacgccccc
cacctgctgccccgcctcctcacccacacggaactggttcctgactggttcccgactggt
tcccgactggttcccgactggttcctgactggttcccgactggttcctgactggataaag
actctttag
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