Scomber japonicus (chub mackerel): 128364417
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Entry
128364417 CDS
T09718
Name
(RefSeq) nuclear factor 7, brain-like
KO
K12012
tripartite motif-containing protein 35
Organism
sjo
Scomber japonicus (chub mackerel)
Brite
KEGG Orthology (KO) [BR:
sjo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
sjo04121
]
128364417
Ubiquitin system [BR:
sjo04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
TRIM/RBCC proteins
128364417
BRITE hierarchy
Motif
Pfam:
PRY
SPRY
zf-RING_UBOX
zf-C3HC4_4
zf-C3HC4
zf-C3HC4_3
zf-C3HC4_2
zf-B_box
zf-RING_5
zf-RING_2
Prok-RING_4
zf-RING_6
DUF4200
U-box
zf-rbx1
Baculo_IE-1
End3
Gp58
zf-RING_10
Sina_RING
Urb2
GldM_1st
TetR_C_37
MbeB_N
AIF-MLS
DUF6845
AAA_11
Cdh1_DBD_1
Syntaxin-6_N
CorA
zf-Nse
zf-RING_4
Motif
Other DBs
NCBI-GeneID:
128364417
NCBI-ProteinID:
XP_053180923
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All DBs
Position
9:complement(8830629..8832165)
Genome browser
AA seq
476 aa
AA seq
DB search
MAEKDALFESFLSCHVCSETFRDPVSLSCGHSFCSSCLQKFWEQAKNKNCPICKRKSSKD
DPGVNFSLKELADSFAGKQKVGSSETVKGEKMVEVVCSKHQEEPKLFCKDEQRAVCPVCE
FSLHHGHNVVPVEEAVSDLKDQLKSDLKPLQDKRNKYKEVEKIYNEMIEHSKKQLLSTEK
QIRAEFNKLHQFLKEEEESRLAALREEEEQKGKTMSRDMKRIQEQISSLSDSISAVEEDL
QKHNVSFLSSYKPTQTRARAQSSLSDPQLVSGTLIDEAKHLGNLSFRVWEKMKEKVHFSP
VILDPNTAADCLYLSDDLTSVRRGDTNHQQLPDNPERFTKYNIVLGSEGFSSGKHSWEVE
VGDHTFWDVGLTNESVDRKGKLLASPKYGIWCLNHRSGKYTNGVGETVTEKKSLQRIRVQ
LDYDRGEVSFYDPEDETHIYTYRDIFTEKLFPYFSIGSAGDAKTTDIKICPTEISL
NT seq
1431 nt
NT seq
+upstream
nt +downstream
nt
atggctgagaaagatgctctttttgaaagcttcctgagctgccatgtgtgttcagagact
ttcagagatcctgtgtctctgagctgcggccacagcttctgttcaagctgtctgcaaaaa
ttctgggaacaagctaaaaacaaaaactgtcccatttgtaaaagaaaatcctccaaagat
gatcctggcgtgaacttttcactgaaggaactagctgactcatttgccgggaaacaaaaa
gttggatcatctgagacagtaaaaggagaaaagatggtggaggtggtgtgtagcaaacat
caagaagagcctaaattgttctgtaaagatgaacagagagctgtgtgtccagtctgtgag
ttttctctccaccacggtcacaatgtggttcctgtagaagaagcagtcagtgacctgaag
gaccagctgaaatctgacttaaagcctctacaggacaagaggaacaaatacaaagaagtg
gagaaaatatacaatgaaatgattgaacactccaagaagcagctgttgtccacagagaag
cagatcagagcagagttcaacaagctccaccagttcctgaaagaggaagaggagtccaga
ctggcagctctgagggaggaagaggagcagaaggggaagactatgagtagagatatgaag
aggattcaggagcagatctcctctctgtcagacagtatctctgctgttgaagaagacctg
cagaaacacaacgtgtcattcctcagcagttataaacccactcagaccagagccagagcc
cagagctcactgtcagatccacagctggtctcaggaacgctgatagatgaggccaaacac
ctgggcaacctgtccttcagagtctgggagaagatgaaggagaaggtccacttcagtcct
gttattctggacccaaacactgcagctgactgtctctatctgtctgatgatctgaccagt
gtgagacgtggagacacaaaccatcagcagctccctgataatccagagagattcactaag
tataacattgttctgggctctgagggcttcagctcagggaaacacagctgggaggtggag
gtgggagaccatactttctgggatgtgggtttgactaacgagtcagttgacaggaaggga
aagctacttgcttcaccaaaatatggaatctggtgtttaaaccatcgcagtggaaaatac
actaatggtgttggtgagactgtcacagagaagaagagtctccagaggatcagagtccag
ctggactatgacaggggggaggtgtccttctacgaccctgaagacgagactcacatctac
acatacagagacattttcactgagaaactcttcccttatttcagtattggatcagctggt
gatgctaaaaccactgatatcaaaatctgtccaactgagatttctctgtga
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