KEGG   Scomber japonicus (chub mackerel): 128364417
Entry
128364417         CDS       T09718                                 
Name
(RefSeq) nuclear factor 7, brain-like
  KO
K12012  tripartite motif-containing protein 35
Organism
sjo  Scomber japonicus (chub mackerel)
Brite
KEGG Orthology (KO) [BR:sjo00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04121 Ubiquitin system [BR:sjo04121]
    128364417
Ubiquitin system [BR:sjo04121]
 Ubiquitin ligases (E3)
  Single Ring-finger type E3
   TRIM/RBCC proteins
    128364417
Motif
Pfam: PRY SPRY zf-RING_UBOX zf-C3HC4_4 zf-C3HC4 zf-C3HC4_3 zf-C3HC4_2 zf-B_box zf-RING_5 zf-RING_2 Prok-RING_4 zf-RING_6 DUF4200 U-box zf-rbx1 Baculo_IE-1 End3 Gp58 zf-RING_10 Sina_RING Urb2 GldM_1st TetR_C_37 MbeB_N AIF-MLS DUF6845 AAA_11 Cdh1_DBD_1 Syntaxin-6_N CorA zf-Nse zf-RING_4
Other DBs
NCBI-GeneID: 128364417
NCBI-ProteinID: XP_053180923
LinkDB
Position
9:complement(8830629..8832165)
AA seq 476 aa
MAEKDALFESFLSCHVCSETFRDPVSLSCGHSFCSSCLQKFWEQAKNKNCPICKRKSSKD
DPGVNFSLKELADSFAGKQKVGSSETVKGEKMVEVVCSKHQEEPKLFCKDEQRAVCPVCE
FSLHHGHNVVPVEEAVSDLKDQLKSDLKPLQDKRNKYKEVEKIYNEMIEHSKKQLLSTEK
QIRAEFNKLHQFLKEEEESRLAALREEEEQKGKTMSRDMKRIQEQISSLSDSISAVEEDL
QKHNVSFLSSYKPTQTRARAQSSLSDPQLVSGTLIDEAKHLGNLSFRVWEKMKEKVHFSP
VILDPNTAADCLYLSDDLTSVRRGDTNHQQLPDNPERFTKYNIVLGSEGFSSGKHSWEVE
VGDHTFWDVGLTNESVDRKGKLLASPKYGIWCLNHRSGKYTNGVGETVTEKKSLQRIRVQ
LDYDRGEVSFYDPEDETHIYTYRDIFTEKLFPYFSIGSAGDAKTTDIKICPTEISL
NT seq 1431 nt   +upstreamnt  +downstreamnt
atggctgagaaagatgctctttttgaaagcttcctgagctgccatgtgtgttcagagact
ttcagagatcctgtgtctctgagctgcggccacagcttctgttcaagctgtctgcaaaaa
ttctgggaacaagctaaaaacaaaaactgtcccatttgtaaaagaaaatcctccaaagat
gatcctggcgtgaacttttcactgaaggaactagctgactcatttgccgggaaacaaaaa
gttggatcatctgagacagtaaaaggagaaaagatggtggaggtggtgtgtagcaaacat
caagaagagcctaaattgttctgtaaagatgaacagagagctgtgtgtccagtctgtgag
ttttctctccaccacggtcacaatgtggttcctgtagaagaagcagtcagtgacctgaag
gaccagctgaaatctgacttaaagcctctacaggacaagaggaacaaatacaaagaagtg
gagaaaatatacaatgaaatgattgaacactccaagaagcagctgttgtccacagagaag
cagatcagagcagagttcaacaagctccaccagttcctgaaagaggaagaggagtccaga
ctggcagctctgagggaggaagaggagcagaaggggaagactatgagtagagatatgaag
aggattcaggagcagatctcctctctgtcagacagtatctctgctgttgaagaagacctg
cagaaacacaacgtgtcattcctcagcagttataaacccactcagaccagagccagagcc
cagagctcactgtcagatccacagctggtctcaggaacgctgatagatgaggccaaacac
ctgggcaacctgtccttcagagtctgggagaagatgaaggagaaggtccacttcagtcct
gttattctggacccaaacactgcagctgactgtctctatctgtctgatgatctgaccagt
gtgagacgtggagacacaaaccatcagcagctccctgataatccagagagattcactaag
tataacattgttctgggctctgagggcttcagctcagggaaacacagctgggaggtggag
gtgggagaccatactttctgggatgtgggtttgactaacgagtcagttgacaggaaggga
aagctacttgcttcaccaaaatatggaatctggtgtttaaaccatcgcagtggaaaatac
actaatggtgttggtgagactgtcacagagaagaagagtctccagaggatcagagtccag
ctggactatgacaggggggaggtgtccttctacgaccctgaagacgagactcacatctac
acatacagagacattttcactgagaaactcttcccttatttcagtattggatcagctggt
gatgctaaaaccactgatatcaaaatctgtccaactgagatttctctgtga

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