KEGG   Scomber japonicus (chub mackerel): 128364448
Entry
128364448         CDS       T09718                                 
Symbol
nol6
Name
(RefSeq) nucleolar protein 6
  KO
K14544  U3 small nucleolar RNA-associated protein 22
Organism
sjo  Scomber japonicus (chub mackerel)
Pathway
sjo03008  Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:sjo00001]
 09120 Genetic Information Processing
  09122 Translation
   03008 Ribosome biogenesis in eukaryotes
    128364448 (nol6)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03009 Ribosome biogenesis [BR:sjo03009]
    128364448 (nol6)
Ribosome biogenesis [BR:sjo03009]
 Eukaryotic type
  90S particles
   U3 small nucleolar RNA-associated proteins
    128364448 (nol6)
SSDB
Motif
Pfam: Nrap_D5 Nrap_D4 Nrap_D2 Nrap Nrap_D3 Nrap_D6
Other DBs
NCBI-GeneID: 128364448
NCBI-ProteinID: XP_053180948
LinkDB
Position
9:25077203..25093153
AA seq 1142 aa
MKNTQIAAEMILPDSSHEEEENKAPAKAKRSKPEEDEGEEVVYHPVKLSRSDLYRPPTAE
ELNQLKEAESLFHCSLLKMQMEELLKEVALSERRKEQIDAFVQILTKLLQTVPQSPEVEV
SDLSWLSGAVKVPFLLVPKSPKGKFHMAPPASVDLIGSYPLGTCTKPRIMVDLAVTIPAD
ILHPKDVLNQRYPRKRALYLAGLAQHLTSSSEIGTMHYSCLHGNRLRPVLLLTPPGKESS
IFTVRVHACPPPGFFKPSRFHPQRNNIRTEWYTGLQASQSSEGDEPPTPHYNSSVLGDLL
PRAHLQFLSAVSSQCSAFPDGVALLKVWLHQRELDQGTGCFNGFLASMLLAFLLTTHRIS
NTMTAYQLLRNSLNFLASTDLTENGISLARDPDSTAPSLADFHNAFQVVFVDPSGHLNMC
ADMTACTYKQLQHEASVSMQFWDDPTVDGFHSLLMIPKPMIRTSDHVFQLCEPAKLQYSC
KKMNLLSELMDHSGNYVHTALPFILSLLQRGFGQRISLLTHSLSPEPKWSVESEAPKHKA
QPPLSFGLMLRLELAASVLERGPPADSPKAAEFRQLWGSRSELRRFQDGAITEAVLWDGQ
SMYQKQLVPKQIVTHLLQLHADIPESCVRYVGAKMDDVIKVGREVPSTGEEESLMVIQSY
DDLSRKLWQLEGLPLSITSVQGAHPALRYTQVFPPQPLKMDYSFFDKERFSRALMPKEGK
PCPAYVTPITVICHMEGSGKWPHDRLAIRHIRAAFHIRLGELLKKHHNYTYKANPAHLDI
WKDGLVFRIQVAYHREPQVLRESVTAQGLLVLRDNEEAQTLEMATIHRPLLTSTLHGLQQ
QYPCFGAVCRLAKRWLGAQLFSEDITEDTADLLVASLFLQPAPFTPPGSPQVGFLRFLHL
LSSFDWRNNPLIVNLNNQLTAPDYTEIKNDFMASRESLPVMFIATPKDKKLSMWTKQAPS
VQMLQRAVMVAAESLKVLEHQLMDGGQIQDVRVLMRPPLDAYDVLIHLNPKQVPLLSQAV
DPPAVTFSRGIMTGNVAQSGGSLPVIDYNPVSLYLAELRDAFGDLALFFCDPYGGTVIAV
LWKPNAFSPVPFKTSQVSARNVKVTGDEATTVPNVEAILEDFQVIGKGLVKSLEARTERW
SV
NT seq 3429 nt   +upstreamnt  +downstreamnt
atgaaaaacacacagatagctgcagagatgattctgccagactcttctcatgaggaggag
gaaaacaaagctcctgctaaagccaaaaggagcaaacctgaggaggatgaaggggaggag
gtggtctatcacccagtgaagctgtcccgcagtgatctgtacagacctccgacagcagag
gagctgaaccagttgaaagaggctgagagcctgtttcattgcagcctgctgaaaatgcag
atggaagagctgctgaaagaagttgccctcagcgagcgcaggaaagagcaaatcgatgcc
ttcgttcagatactcaccaagctgctccagactgtgccacaatccccagaagttgaggtg
agtgacctgtcatggctgtctggtgcagttaaggtccctttcctcctggttcccaaatca
ccaaagggtaagttccacatggcacctccggcttctgttgacctgatcggcagctatccc
ctgggtacatgcaccaaacctcgcatcatggtggacctggctgtcacaatcccagctgat
attctccacccgaaggacgtcctgaaccagaggtatcccaggaaaagggctctctacctg
gcaggcctggctcagcatctcacatcctcctctgaaattggaaccatgcactattcttgt
ctccatgggaatcgacttcggcccgttctcctgctgacccctccaggtaaagagtcttcc
atcttcactgtacgtgttcatgcctgtccacctcctggtttcttcaagcccagtcgtttc
cacccgcagaggaataacatcaggacagagtggtacactgggttgcaggcctcacagtcg
tctgagggcgatgaacctcctactccacattacaatagctctgttctgggggatcttctg
cccagggctcacctccagttcctttctgcagtcagctctcagtgctcagcttttcctgat
ggggtggctttgctcaaagtctggctccatcaaagagagcttgaccagggcacaggttgt
tttaatggctttctggcttcgatgcttttggcatttctgctgaccacacacagaatcagt
aacaccatgacagcctatcagttgcttcgaaacagcttgaacttcttggcatctacagac
ctgacagagaatggaattagcctagccagagatcctgactctacagctccgtcactggca
gacttccacaacgccttccaagtcgtgttcgtcgatccctccggacatctcaatatgtgt
gctgatatgactgcttgtacctacaaacagctgcagcatgaggcgtctgtgtcgatgcag
ttctgggacgaccctacagtggacgggtttcacagcctcctcatgatccccaaacccatg
ataaggaccagcgaccatgtctttcagttgtgtgagccagcaaagcttcagtacagctgt
aagaaaatgaatctcctcagtgagctgatggaccacagtggaaactacgtccacactgcg
ctgccttttatcctgtctctgcttcagcgaggatttggccaaagaatcagcctcctcacc
cactctctttctcctgagcctaagtggtctgtggagagtgaagccccaaagcacaaagct
caacctcctctctcctttggcttaatgttaaggctggagctggcagcctctgtcctggaa
agggggcctcctgcagacagccccaaggcggctgagtttcgtcagctgtggggttctcgc
tctgagctgcgtcgcttccaggacggtgccatcactgaggccgtgctgtgggatggacag
agcatgtaccagaaacaactggtccccaaacagatcgtcacacacctgctacagctgcat
gcagatatccccgaatcctgtgtgcgatatgtgggggcgaagatggatgacgtcatcaaa
gtaggacgtgaggtgcctagtactggagaggaggagagtttaatggtgattcagtcctat
gatgacctgagcaggaaactttggcagctggaaggtctgcctctctccatcacatcagtg
caaggagcccaccctgcactcagatacacacaggtttttccccctcagccgctgaagatg
gactattccttctttgacaaagaaaggttttcccgggcattgatgccaaaggaaggcaaa
ccctgccctgcttacgtcactcccatcacagtgatctgtcacatggaggggagtggaaag
tggcctcacgaccgcctcgccatccgccacatccgagccgccttccacatccgcctggga
gagttactcaagaagcaccataattatacgtacaaggccaaccccgcacaccttgacatc
tggaaggatggcttggtgttccgcatccaggtggcataccatcgtgagccccaggtactg
agggagagtgtgactgcacaggggttgctggttctaagggacaacgaggaggctcagacc
ctggagatggccaccatacacaggcctctactaaccagcacattgcatgggctccagcag
cagtacccatgtttcggggcagtgtgtcgcctggctaaacgctggctgggggctcagctc
ttcagcgaagacatcacagaggacacagcagacctgctggtggcgtcgctcttcttgcag
cctgcaccatttactcctcctggttctcctcaggtgggcttccttcgtttccttcatctg
ctctcctcctttgactggaggaacaacccgctgatagtcaacctcaacaaccagctcaca
gccccagactacacagagatcaagaatgacttcatggcctccagggagtctctgcctgtc
atgtttatagctacgcctaaagacaaaaaactgtctatgtggaccaagcaagctcctagt
gtacagatgctgcaacgtgcagtgatggtggctgcagagagtcttaaagtgctggaacat
cagctgatggatggtggccagatacaggatgtcagggtactcatgcgtcctcctctggat
gcctatgatgtgctgatccacctgaaccccaaacaggtacccctgctaagccaggcagtg
gaccctcctgctgtcaccttcagcaggggtatcatgactggcaatgtagctcagtctgga
gggtcactacctgtcatcgactacaaccctgtttccctctacctggcagagctcagggat
gcgtttggagacctggctctcttcttctgtgacccttatggtggaacagtgattgctgtt
ttgtggaagccaaacgccttctctccagtgcccttcaagacgtctcaagtgtctgcacga
aatgtcaaggtgactggggatgaagcaacaactgttcccaatgttgaagcaatattggag
gacttccaggtgattggaaaaggtttggtaaaatctttggaggccaggactgaaagatgg
tcggtctaa

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