Scomber japonicus (chub mackerel): 128364448
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Entry
128364448 CDS
T09718
Symbol
nol6
Name
(RefSeq) nucleolar protein 6
KO
K14544
U3 small nucleolar RNA-associated protein 22
Organism
sjo
Scomber japonicus (chub mackerel)
Pathway
sjo03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
sjo00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
128364448 (nol6)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
sjo03009
]
128364448 (nol6)
Ribosome biogenesis [BR:
sjo03009
]
Eukaryotic type
90S particles
U3 small nucleolar RNA-associated proteins
128364448 (nol6)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Nrap_D5
Nrap_D4
Nrap_D2
Nrap
Nrap_D3
Nrap_D6
Motif
Other DBs
NCBI-GeneID:
128364448
NCBI-ProteinID:
XP_053180948
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All DBs
Position
9:25077203..25093153
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AA seq
1142 aa
AA seq
DB search
MKNTQIAAEMILPDSSHEEEENKAPAKAKRSKPEEDEGEEVVYHPVKLSRSDLYRPPTAE
ELNQLKEAESLFHCSLLKMQMEELLKEVALSERRKEQIDAFVQILTKLLQTVPQSPEVEV
SDLSWLSGAVKVPFLLVPKSPKGKFHMAPPASVDLIGSYPLGTCTKPRIMVDLAVTIPAD
ILHPKDVLNQRYPRKRALYLAGLAQHLTSSSEIGTMHYSCLHGNRLRPVLLLTPPGKESS
IFTVRVHACPPPGFFKPSRFHPQRNNIRTEWYTGLQASQSSEGDEPPTPHYNSSVLGDLL
PRAHLQFLSAVSSQCSAFPDGVALLKVWLHQRELDQGTGCFNGFLASMLLAFLLTTHRIS
NTMTAYQLLRNSLNFLASTDLTENGISLARDPDSTAPSLADFHNAFQVVFVDPSGHLNMC
ADMTACTYKQLQHEASVSMQFWDDPTVDGFHSLLMIPKPMIRTSDHVFQLCEPAKLQYSC
KKMNLLSELMDHSGNYVHTALPFILSLLQRGFGQRISLLTHSLSPEPKWSVESEAPKHKA
QPPLSFGLMLRLELAASVLERGPPADSPKAAEFRQLWGSRSELRRFQDGAITEAVLWDGQ
SMYQKQLVPKQIVTHLLQLHADIPESCVRYVGAKMDDVIKVGREVPSTGEEESLMVIQSY
DDLSRKLWQLEGLPLSITSVQGAHPALRYTQVFPPQPLKMDYSFFDKERFSRALMPKEGK
PCPAYVTPITVICHMEGSGKWPHDRLAIRHIRAAFHIRLGELLKKHHNYTYKANPAHLDI
WKDGLVFRIQVAYHREPQVLRESVTAQGLLVLRDNEEAQTLEMATIHRPLLTSTLHGLQQ
QYPCFGAVCRLAKRWLGAQLFSEDITEDTADLLVASLFLQPAPFTPPGSPQVGFLRFLHL
LSSFDWRNNPLIVNLNNQLTAPDYTEIKNDFMASRESLPVMFIATPKDKKLSMWTKQAPS
VQMLQRAVMVAAESLKVLEHQLMDGGQIQDVRVLMRPPLDAYDVLIHLNPKQVPLLSQAV
DPPAVTFSRGIMTGNVAQSGGSLPVIDYNPVSLYLAELRDAFGDLALFFCDPYGGTVIAV
LWKPNAFSPVPFKTSQVSARNVKVTGDEATTVPNVEAILEDFQVIGKGLVKSLEARTERW
SV
NT seq
3429 nt
NT seq
+upstream
nt +downstream
nt
atgaaaaacacacagatagctgcagagatgattctgccagactcttctcatgaggaggag
gaaaacaaagctcctgctaaagccaaaaggagcaaacctgaggaggatgaaggggaggag
gtggtctatcacccagtgaagctgtcccgcagtgatctgtacagacctccgacagcagag
gagctgaaccagttgaaagaggctgagagcctgtttcattgcagcctgctgaaaatgcag
atggaagagctgctgaaagaagttgccctcagcgagcgcaggaaagagcaaatcgatgcc
ttcgttcagatactcaccaagctgctccagactgtgccacaatccccagaagttgaggtg
agtgacctgtcatggctgtctggtgcagttaaggtccctttcctcctggttcccaaatca
ccaaagggtaagttccacatggcacctccggcttctgttgacctgatcggcagctatccc
ctgggtacatgcaccaaacctcgcatcatggtggacctggctgtcacaatcccagctgat
attctccacccgaaggacgtcctgaaccagaggtatcccaggaaaagggctctctacctg
gcaggcctggctcagcatctcacatcctcctctgaaattggaaccatgcactattcttgt
ctccatgggaatcgacttcggcccgttctcctgctgacccctccaggtaaagagtcttcc
atcttcactgtacgtgttcatgcctgtccacctcctggtttcttcaagcccagtcgtttc
cacccgcagaggaataacatcaggacagagtggtacactgggttgcaggcctcacagtcg
tctgagggcgatgaacctcctactccacattacaatagctctgttctgggggatcttctg
cccagggctcacctccagttcctttctgcagtcagctctcagtgctcagcttttcctgat
ggggtggctttgctcaaagtctggctccatcaaagagagcttgaccagggcacaggttgt
tttaatggctttctggcttcgatgcttttggcatttctgctgaccacacacagaatcagt
aacaccatgacagcctatcagttgcttcgaaacagcttgaacttcttggcatctacagac
ctgacagagaatggaattagcctagccagagatcctgactctacagctccgtcactggca
gacttccacaacgccttccaagtcgtgttcgtcgatccctccggacatctcaatatgtgt
gctgatatgactgcttgtacctacaaacagctgcagcatgaggcgtctgtgtcgatgcag
ttctgggacgaccctacagtggacgggtttcacagcctcctcatgatccccaaacccatg
ataaggaccagcgaccatgtctttcagttgtgtgagccagcaaagcttcagtacagctgt
aagaaaatgaatctcctcagtgagctgatggaccacagtggaaactacgtccacactgcg
ctgccttttatcctgtctctgcttcagcgaggatttggccaaagaatcagcctcctcacc
cactctctttctcctgagcctaagtggtctgtggagagtgaagccccaaagcacaaagct
caacctcctctctcctttggcttaatgttaaggctggagctggcagcctctgtcctggaa
agggggcctcctgcagacagccccaaggcggctgagtttcgtcagctgtggggttctcgc
tctgagctgcgtcgcttccaggacggtgccatcactgaggccgtgctgtgggatggacag
agcatgtaccagaaacaactggtccccaaacagatcgtcacacacctgctacagctgcat
gcagatatccccgaatcctgtgtgcgatatgtgggggcgaagatggatgacgtcatcaaa
gtaggacgtgaggtgcctagtactggagaggaggagagtttaatggtgattcagtcctat
gatgacctgagcaggaaactttggcagctggaaggtctgcctctctccatcacatcagtg
caaggagcccaccctgcactcagatacacacaggtttttccccctcagccgctgaagatg
gactattccttctttgacaaagaaaggttttcccgggcattgatgccaaaggaaggcaaa
ccctgccctgcttacgtcactcccatcacagtgatctgtcacatggaggggagtggaaag
tggcctcacgaccgcctcgccatccgccacatccgagccgccttccacatccgcctggga
gagttactcaagaagcaccataattatacgtacaaggccaaccccgcacaccttgacatc
tggaaggatggcttggtgttccgcatccaggtggcataccatcgtgagccccaggtactg
agggagagtgtgactgcacaggggttgctggttctaagggacaacgaggaggctcagacc
ctggagatggccaccatacacaggcctctactaaccagcacattgcatgggctccagcag
cagtacccatgtttcggggcagtgtgtcgcctggctaaacgctggctgggggctcagctc
ttcagcgaagacatcacagaggacacagcagacctgctggtggcgtcgctcttcttgcag
cctgcaccatttactcctcctggttctcctcaggtgggcttccttcgtttccttcatctg
ctctcctcctttgactggaggaacaacccgctgatagtcaacctcaacaaccagctcaca
gccccagactacacagagatcaagaatgacttcatggcctccagggagtctctgcctgtc
atgtttatagctacgcctaaagacaaaaaactgtctatgtggaccaagcaagctcctagt
gtacagatgctgcaacgtgcagtgatggtggctgcagagagtcttaaagtgctggaacat
cagctgatggatggtggccagatacaggatgtcagggtactcatgcgtcctcctctggat
gcctatgatgtgctgatccacctgaaccccaaacaggtacccctgctaagccaggcagtg
gaccctcctgctgtcaccttcagcaggggtatcatgactggcaatgtagctcagtctgga
gggtcactacctgtcatcgactacaaccctgtttccctctacctggcagagctcagggat
gcgtttggagacctggctctcttcttctgtgacccttatggtggaacagtgattgctgtt
ttgtggaagccaaacgccttctctccagtgcccttcaagacgtctcaagtgtctgcacga
aatgtcaaggtgactggggatgaagcaacaactgttcccaatgttgaagcaatattggag
gacttccaggtgattggaaaaggtttggtaaaatctttggaggccaggactgaaagatgg
tcggtctaa
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