Scomber japonicus (chub mackerel): 128364450 Help Entry 128364450         CDS       T09718                                  Symbol tncb Name (RefSeq) LOW QUALITY PROTEIN: tenascin   KO K06252   tenascin Organism sjo  Scomber japonicus (chub mackerel) Pathway sjo04510   Focal adhesion sjo04512   ECM-receptor interaction Brite KEGG Orthology (KO) [BR:sjo00001]  09130 Environmental Information Processing   09133 Signaling molecules and interaction    04512 ECM-receptor interaction     128364450 (tncb)  09140 Cellular Processes   09144 Cellular community - eukaryotes    04510 Focal adhesion     128364450 (tncb)  09180 Brite Hierarchies   09183 Protein families: signaling and cellular processes    00536 Glycosaminoglycan binding proteins [BR:sjo00536]     128364450 (tncb) Glycosaminoglycan binding proteins [BR:sjo00536]  Heparan sulfate / Heparin   Extracellular matrix molecules    128364450 (tncb) BRITE hierarchy SSDB OrthologParalogGene clusterGFIT Motif Pfam:  fn3 EGF_TEN Fibrinogen_C EGF_Teneurin EGF_2 EGF_Tenascin Ig_DSCAM-DSCAML_C Pur_ac_phosph_N Fn3_Dep-1_2nd Interfer-bind fn3_2 EGF NDNF_C Motif Other DBs NCBI-GeneID:  128364450 NCBI-ProteinID:  XP_053180950 LinkDB All DBs Position 9:complement(34456781..34489273) Genome browser AA seq 1728 aa AA seqDB search MGKGFLFSCVAVVLLIQLSTAGLVKKVIRHRREALMPKKTQENLTLPDPDQPVVFNHVYN INVPSTSLCSVDLDSPGGTELKHKNSPMEMQNTEHMEHTVDGDNQIVFTHRINIPKQACG CDNQLPDIKDILNRLEMLESELSSLREQCSTGAGCCGTQVTGEVATKPYCNGRGNWSADT CSCVCEPGWKGPNCTEPECPNDCQDQGRCVDGKCECFEGFGGDDCGIELCLLDCGDYGHC VEGSCLCEEGFIGEDCSQTNCLNNCLGRGRCEDDECVCDEPWTGFDCSELICPNDCYDRG RCINGTCYCEEGFTGEDCGELTCPGNCNSRGMCVNGHCVCQTGYSGEDCSKITCPDNCNE RGHCFNGKCICDPGFEGEDCSILSCPDNCSNRGQCINGECVCDIGYQGEDCSELSCPNNC QDRGQCVDGQCVCNKGFAGEDCSIKTCPKDCMGRGECVDGKCVCFVGFTGKDCGELTCPN DCLDRGHCVNGQCVCHKGFTGEDCSEKTCPKNCLDRGYCVDGNCVCYEGFTGPDCSILTC PEDCQNQGRCENGVCVCDEGFIGEDCSEVNCLCLCVNQGHCENRYVIHFXKPSEQIIDFK CPSTVSPPKDLTVVVVTPETVDVSWENEMRVTEYLVTYMPTATGGLELDMRVPGDQKMAT IRELEPGVEYLISVYAVLNNKKSVPVSARVSTHLPEPEGLKFKSVRETSVEVQWDPLDIP FDGWNLIFRNTKEEDGEILNSLGRPETTFEQSGLGPGQEYEVKLEVVKNNKRGPPASKNV ITRIDAPSQMDIRDVTDTTALVTWFQPVADVDGVTVSYGPSSSPADRKVVELSSTDTQYH LGGLAPDTQYEISLTARKGDLTSIPVYESFLTDLDAPRDLQTVEVTDETITLEWKNSMAR VDNYRIKYGPLSGGEHGELLFPPGPKDNTQAKITGLRPGTEYGMGVTAVKDERESLPTTT NAVTALDAPKDLTVTEVTETTMILEWKRPMAKLDSYRLVYVSADGHRAEDVVPGSSEAHT LRGLTPGMLYTISIIAERGRRTSAPATISAPTEEEKPMVTNVTISEVSWDSFILSWSADD GAFEAFVIEVYDAESGIEWHNHTLAADARSFFLSNLMPNTWYRANLYGKYRGTLLDPVFA DTITETEPEIQALLVSDITPESFNLAWEAEEDAFDTFVVMVSELEGTGQPQELVLGGEER NAEITELTEDTEYKIEIFGLNLERRSKSVQERVITDLGSPKGIRFSDVTDTSATVHWVVS RARVDSYRVTYVPAHGGNAKTLTVDGSESQIVLPNLTPGVTYEVTVVALKGQRESEPGSD SVTTALDKPRGLTAVNITDTEALLLWQPAIATVDGYVITYSADSVAPVMERVSGNVVEFE MGSLTPATHYTVKVYAVRDLAKSAATTTEFTTDVDAPQDLAASNIQTETGMLTWRPPRAD ITGYILSFESADGTVREVVLSPTAVSYNMVQLSASTEYSVKLQAIAGPKRSRVITTVFTT TGVLYRHPRDCSQALLNGDTSSGLYTIYLGGDESQPIQVYCDMSTDGGGWIIFLRRQSGK LEFFRNWKNYTAGFGDMNDEFWLGLSNLHKITAGGQYELRVDLRDKGETAYAQYDKFSIS EPRTRYKVHVGGYSGTAGDSMTYHHGRPFSTYDHDNDIAVTNCALSYKGAFWYKNCHRVN LMGRYGDNSHSKGVNWFHWKGHEHSIEFAEMKIRPSNFRNLEGRRKRS NT seq 5187 nt NT seq  +upstreamnt  +downstreamnt atggggaaaggctttctcttcagctgcgtggccgtggtcttgctcattcagctgtccact gctggcctggtcaagaaggtgatccgccaccgcagagaggctctgatgcctaagaaaacc caagagaacctcacactgcccgaccctgaccagccggttgtgtttaatcatgtctacaac atcaacgtaccctctacatctctctgctccgtggacctcgactcgcctggtggcactgag ctcaaacacaagaacagcccgatggaaatgcagaatactgagcacatggagcacacggtg gatggtgacaatcagatcgttttcacccaccgcatcaatatccccaagcaggcgtgtggc tgtgacaaccagctgccagacatcaaagatatcctgaacaggctggagatgctagagtca gagctgtctagtctgagagagcagtgcagcactggggcaggctgctgtgggactcaagtt acaggtgaagtggccacaaagccctattgtaatggccgtgggaactggagtgctgacact tgcagctgtgtatgcgaacctggatggaagggccccaactgtaccgaacctgagtgcccc aacgactgccaggaccagggccgctgtgtggatggaaaatgtgaatgctttgagggcttt ggtggagacgactgcggtattgagctttgcctgctggactgcggcgactatggccactgt gtcgaagggtcctgcctctgtgaggagggcttcatcggtgaggactgctcccagaccaat tgcctcaacaactgccttggccgtggacgttgtgaggacgatgagtgtgtttgcgatgag ccttggacaggctttgactgctccgaactcatctgtccaaatgactgctacgaccgtgga cgctgtatcaatggtacctgctactgtgaggaaggcttcactggagaagactgtggcgag ctcacttgtcctggcaactgtaacagccgtggcatgtgcgtgaatggccactgtgtgtgt cagaccggctacagtggagaggactgctcgaagatcacctgtcccgacaactgcaacgag agaggccattgcttcaatggaaagtgcatctgtgatccaggatttgagggtgaagattgc tccattctctcatgccccgacaactgcagcaacaggggccagtgcatcaacggagaatgt gtatgtgacataggataccaaggtgaggactgtagcgagctctcctgccccaacaattgc caagaccgtggtcaatgcgttgatgggcagtgcgtatgcaacaaaggctttgccggggag gactgcagcatcaagacctgtccaaaagactgcatgggacgtggggagtgtgtggacggc aaatgtgtttgctttgtcggcttcacgggtaaagactgcggtgagctcacctgccccaat gactgtctggaccgtggccactgcgtcaacgggcaatgtgtttgtcataaaggtttcact ggtgaggactgcagtgagaagacatgtcccaaaaactgtctcgacagaggttactgtgtc gatggcaactgcgtgtgctatgaaggtttcactggaccagactgttccatactgacctgc ccagaggactgccagaaccagggacgctgtgagaatggagtgtgtgtctgtgatgagggc ttcatcggggaggactgctctgaggtgaactgcttgtgcttgtgtgtgaaccagggacac tgtgagaacagatatgttattcatttttaaaaaccctcagaacagattattgactttaag tgtccctccacagtatcaccacccaaagacctaacggtggtagtggtcaccccagagaca gtggatgtctcttgggagaatgagatgcgtgtaacagagtatctggtcacctacatgcct acggccactggaggtctggagctggacatgcgggtgcctggggaccagaagatggccact attcgggagcttgaacctggtgtggagtacctgattagcgtctatgctgttctcaacaac aagaagagcgttcctgtcagtgctagagtgtcaacacatcttcctgagcctgagggactc aagttcaagtcagttcgggagacatcagtggaggtgcagtgggacccattggacattccc tttgacggctggaacctcatcttcagaaacactaaagaggaggatggtgagattcttaac tccctcggccgtcccgagaccacctttgagcagtcaggcctgggccccggccaggagtac gaggtcaaactggaggtggtgaagaacaacaagcgtggaccgcctgcctccaagaacgtc atcacgaggattgatgcccccagccagatggacatacgtgatgtgaccgacaccacagca ttggtgacctggttccagcctgtggctgacgtggacggggtcaccgtctcatacgggccc agttccagtcctgctgatcgcaaggtggttgagctgtcctccactgacacccagtaccac ctgggaggccttgcccctgacacccagtacgagatatctctgacggctcggaagggagat ctgaccagcattcctgtttacgagtccttcctcacagacctggatgctcccagagacctg cagacagttgaggtgacagacgagactatcactcttgagtggaaaaacagcatggctcgg gtggacaactaccgcatcaagtacggacctctgtctggaggcgagcatggcgagctgctt ttccccccaggacccaaagacaatacacaggccaagatcactggcctgagacctggcaca gagtacgggatgggagtgacagcagtgaaggatgaacgggagagtctgccgacgaccacc aacgcagtgactgctctggatgctcccaaggacttgaccgttacagaggtgacagagacc accatgatcctggagtggaagcgccccatggccaaactggactcctacagactggtctat gtttcagccgatggccacagggctgaggacgttgtccccggcagctccgaggcccacacc ctaaggggcctgacgcccggcatgctgtacaccatcagcatcatcgccgagagaggccgc aggaccagtgcaccagccaccatctcagcacccacagaggaggagaaacccatggtgacc aacgtcaccatcagcgaagtgtcgtgggacagcttcatcctgtcctggtctgctgatgat ggggcgttcgaggcctttgtgatcgaggtttacgatgcagagtcgggcattgagtggcat aaccacacgttggccgccgatgcacgcagcttcttcctctctaacctcatgcccaacacc tggtacagagccaatctgtacgggaagtacaggggcaccctcttagaccctgtctttgca gacactatcacagagaccgaaccagagatacaggctctcctagtctccgacatcacccct gagagctttaatctggcctgggaggctgaagaggacgccttcgacacatttgtcgtaatg gtcagcgagctcgagggcacaggccaaccacaagaactggtgctgggcggagaggagcga aacgcagagataacagagctcactgaggacacggagtacaaaattgaaatctttgggctc aatttggaaagacgctccaagtctgtacaggagcgggtgataacagacctgggttcaccc aagggtatccgcttctctgatgtcactgacacgtctgccactgttcactgggtggtttca agagctcgggtggacagctaccgggtcacttatgtgcctgctcatggaggaaatgctaag actctgaccgtggatggctctgagtctcagattgtactgcccaacctgacgcccggggtc acctacgaggtcactgtcgttgctctcaagggtcaaagggagagcgagcctgggtctgac agcgtcaccacagctctggataaaccccgcggtctgactgcagtcaacatcactgacact gaagctctgttgctctggcagcccgccatcgctactgttgatggctacgtcatcacctac agtgcagactcagtggctccagtgatggagcgtgtgtcaggaaacgtggtggagtttgag atgggctctctgacgccagccacgcattacaccgtgaaggtttacgcagtgagggacttg gccaagagcgcagccactaccactgagtttaccactgatgtggacgcccctcaggacctg gcagccagtaacatccagacggagaccggcatgctgacctggaggccgcctcgcgctgac atcaccgggtacatcctcagctttgagtcagcagacggtaccgtccgggaggtggtcttg agtcccactgctgtctcttataacatggttcagcttagcgcctccacagagtactcagtc aagctgcaagccattgctggtcccaagagaagcagagtcatcaccactgtcttcaccacc actggtgtattgtacagacaccctagggactgctcccaggccctgctgaatggcgatacc tcatcaggtctgtacaccatctatctgggtggagatgagagccagcccatccaggtctac tgtgacatgagcactgatggaggcggatggatcattttcctcagacgccagagtggaaaa ctggagttcttccgcaactggaagaattacactgcgggcttcggggacatgaatgatgaa ttctggctgggtctgtccaacctgcataagataacagctggaggtcagtatgagctgcga gtcgacctgagagataagggagaaacagcctacgctcagtacgacaagttctccatctct gaacctcggacacgttacaaggtccatgtaggaggatacagtggaacagcaggtgactca atgacctaccaccatggtcgtccattctccacttacgaccacgacaatgacatcgctgtc accaactgtgccctgtcctataagggcgccttctggtataaaaactgccaccgtgtcaac ctcatgggacgatatggagataacagtcacagcaagggtgtcaactggttccactggaaa ggccacgagcactcgattgagtttgccgagatgaagattagaccatctaacttcagaaac ctggagggaaggaggaaacgatcataa

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