Scomber japonicus (chub mackerel): 128364453
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Entry
128364453 CDS
T09718
Symbol
pcna
Name
(RefSeq) proliferating cell nuclear antigen
KO
K04802
proliferating cell nuclear antigen
Organism
sjo
Scomber japonicus (chub mackerel)
Pathway
sjo03030
DNA replication
sjo03410
Base excision repair
sjo03420
Nucleotide excision repair
sjo03430
Mismatch repair
sjo04110
Cell cycle
sjo04530
Tight junction
Brite
KEGG Orthology (KO) [BR:
sjo00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
128364453 (pcna)
03410 Base excision repair
128364453 (pcna)
03420 Nucleotide excision repair
128364453 (pcna)
03430 Mismatch repair
128364453 (pcna)
09140 Cellular Processes
09143 Cell growth and death
04110 Cell cycle
128364453 (pcna)
09144 Cellular community - eukaryotes
04530 Tight junction
128364453 (pcna)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
sjo03032
]
128364453 (pcna)
03400 DNA repair and recombination proteins [BR:
sjo03400
]
128364453 (pcna)
DNA replication proteins [BR:
sjo03032
]
Eukaryotic type
DNA Replication Elongation Factors
Other elongation factors
128364453 (pcna)
DNA repair and recombination proteins [BR:
sjo03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
Long Patch-BER factors
128364453 (pcna)
MMR (mismatch excision repair)
Other MMR factors
128364453 (pcna)
TLS (translesion DNA synthesis) factors
Other TLS factors
128364453 (pcna)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PCNA_C
PCNA_N
Rad1
Rad9
Hus1
Motif
Other DBs
NCBI-GeneID:
128364453
NCBI-ProteinID:
XP_053180953
LinkDB
All DBs
Position
9:complement(15618409..15621783)
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AA seq
260 aa
AA seq
DB search
MFEARLVQGSILKKVLEALKDLITEACWDVSSSGISLQSMDSSHVSLVQLTLRSDGFDSY
RCDRNLAMGVNLSSMSKILKCAGNEDIITLRAEDNADTLALVFETLNQEKVSDYEMKLMD
LDVEQLGIPEQEYSCVVKMPSGEFARICRDLSQIGDAVMISCAKDGVKFSATGELGTGNV
KLSQTSNVDKEDEAVTIEMNEPVQLIFALNYLNFFTKATPLSKTVTLSMSADIPLVVEYK
IADMGHVKYYLAPKIDEEAS
NT seq
783 nt
NT seq
+upstream
nt +downstream
nt
atgtttgaggctcgcctggttcagggatccatcttgaagaaggtactggaagctctgaag
gacctgatcacagaagcctgctgggatgtgagctcgtccgggatctcactgcagagcatg
gactcgtctcacgtctccctggtgcagctcaccctgaggagcgacggcttcgactcgtac
cgctgcgacagaaacctggccatgggggtcaacctgagcagtatgtcaaagatcctgaag
tgtgccggaaacgaggacatcatcaccctcagagcagaagacaatgcagacacactcgcc
ctcgtgttcgagacactcaaccaggagaaagtctccgattatgagatgaaactgatggac
ctggatgtggagcagctcggtattccagagcaggagtacagctgtgtagtgaagatgccc
tctggggagtttgcccgtatctgccgtgacctgtcccagatcggcgatgctgtcatgatc
tcctgcgccaaggatggagtcaagttctctgccaccggagagctcggcaccggaaacgtc
aagctgtcccagaccagcaacgtagacaaagaggatgaggctgttactattgagatgaac
gagcccgttcagctgatctttgccctcaactacctgaacttcttcaccaaggccacacca
ctttccaagacagttaccctcagcatgtctgctgatattcccctcgtggttgagtacaag
attgctgatatgggacacgtcaaatactacttggcgccaaagatcgatgaggaggcttct
taa
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