Scomber japonicus (chub mackerel): 128364455
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Entry
128364455 CDS
T09718
Symbol
hnf1a
Name
(RefSeq) hepatocyte nuclear factor 1-alpha
KO
K08036
transcription factor 1, hepatocyte nuclear factor 1-alpha
Organism
sjo
Scomber japonicus (chub mackerel)
Brite
KEGG Orthology (KO) [BR:
sjo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
sjo03000
]
128364455 (hnf1a)
Transcription factors [BR:
sjo03000
]
Eukaryotic type
Helix-turn-helix
Homeo domain POU
128364455 (hnf1a)
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Gene cluster
GFIT
Motif
Pfam:
HNF-1B_C
HNF-1_N
HNF-1A_C
Homeodomain
Telethonin
HTH_37
HTH_5
Motif
Other DBs
NCBI-GeneID:
128364455
NCBI-ProteinID:
XP_053180954
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Position
9:30259998..30266238
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AA seq
561 aa
AA seq
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MEGEERARAAKARSSLTALQEQLIWALLGSGLSRDVLVQALGELEGDRATAGAEKGEKGD
GESSEEGEMDFPPPIFRDLDKLPPEEANKLRTEVERLLQEDPWRVAKIVKSYMQQHNLPQ
REVVESTGLNQSHLSQHLNKGTPMKNQKRAALYTWYVKKQCEISQQFTNAKHGFGSVEDQ
GEDTRKGRRNRFKWGPASLQILFHAYEQQKNPSKEEREGLVDDCNRAECLQRGVSPSQLA
GLGSNLVTEVRVYNWFANRRKEEAFRHKLALDTPFTNQSTSSSNPALPHSPEHGVKYSQQ
IACETLSSVRGSGGERVGRLVISPVQLEPSHTLLETHNPKPVSSGGPLPPVSTLTSLHSL
SASNTSSQGVIMASLPSIMSLGESSLFIGLASTQPQTIPVINNVGGSFTTLQPISFQQQL
HASPQQQISQQLHGHMGASPFMATMAQLPCHMYNKSDSPQYHSSSLLSQAMVITDSSSLG
TLTSLTAVRQILTADPEEQTDPSLQEESLHLQPSTPVPASSESLELYPDSQTTESHQSHL
LSPSPTDISSYIPTQMVSTAQ
NT seq
1686 nt
NT seq
+upstream
nt +downstream
nt
atggagggagaggagagggccagggcagctaaggcgaggtcgagcctgaccgctcttcag
gagcagctgatctgggccttgctaggatccggactgtcccgggacgtcctggtccaagcc
ttgggggaactggagggagacagggcgactgctggtgccgagaagggagagaaaggagat
ggagagagctctgaagagggagaaatggatttcccaccgcccatattccgagatttggat
aagcttcccccagaggaggcaaacaaactgaggactgaagtcgaacggctactgcaagag
gatccctggcgtgttgcgaaaattgtgaaaagctacatgcagcagcacaacctccctcag
agagaggtggtggagtctacaggactcaaccagtcccacctctcccagcacctcaacaaa
ggcacgcccatgaagaaccagaagagagctgctctgtacacctggtacgtcaagaagcag
tgtgagatcagccagcagttcaccaatgccaaacatggctttggatcagtggaggaccaa
ggagaggacaccaggaaaggacggaggaacaggttcaaatggggtcctgcgtccctgcaa
atcctcttccatgcctacgaacaacaaaagaaccccagcaaggaggaaagagagggtttg
gtggatgactgtaacagggcagagtgtctacagagaggggtgtctccctctcagctggct
ggcctaggctctaacctggtgacggaggtccgggtgtacaactggtttgccaaccggcgc
aaagaggaggccttccgtcataaactggccctggacacgcctttcaccaaccagtctacc
tcctcttccaaccctgctctcccacatagtcctgagcatggtgtgaaatacagccagcaa
attgcatgtgaaaccctgagctcagtcaggggtagcggaggggaaagagtgggacgcctg
gtgatcagccctgtccaattggagccaagccacacactcctcgagacccacaatcccaag
ccggtgtccagcggtggcccactgcccccagtaagcactctgacctcgctgcacagtctg
tctgcatccaacacgtcctcacagggcgtcatcatggcctcactgcccagcatcatgagc
ctgggagagtcctcacttttcatcggtttagcctccacccagcctcagaccataccggtc
ataaacaacgtggggggcagtttcaccactctgcagccaatctcattccagcagcagctt
cacgcctccccgcagcagcaaatatcacagcagctccacggtcacatgggtgccagtcca
ttcatggcaacaatggcacagctgccatgtcacatgtacaacaagtctgattctccccag
taccactcgtccagtctgctgtctcaagccatggtcatcactgacagcagcagcctgggg
acgctgaccagcctcactgctgtccgacagattctaacagcagatcctgaagaacagacg
gacccatccttacaggaagaatctctgcacctgcaaccctccacacctgtaccagcttcc
tccgagagcctcgagctgtaccccgactctcagacgacagaaagccaccagtctcacctc
ctctcaccttcaccaacagacatcagctcctacattcctacacaaatggtttctactgcg
caatag
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