Scomber japonicus (chub mackerel): 128364484
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Entry
128364484 CDS
T09718
Symbol
smarcad1a
Name
(RefSeq) SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A containing DEAD/H box 1A
KO
K14439
SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A containing DEAD/H box 1 [EC:5.6.2.-]
Organism
sjo
Scomber japonicus (chub mackerel)
Brite
KEGG Orthology (KO) [BR:
sjo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
sjo03036
]
128364484 (smarcad1a)
Chromosome and associated proteins [BR:
sjo03036
]
Eukaryotic type
Chromatin remodeling factors
Other chromatin remodeling factors
128364484 (smarcad1a)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SNF2-rel_dom
Helicase_C
ResIII
CUE
DEAD
HHH_3
TTC3_9th
Motif
Other DBs
NCBI-GeneID:
128364484
NCBI-ProteinID:
XP_053180990
LinkDB
All DBs
Position
9:complement(18668020..18684002)
Genome browser
AA seq
1063 aa
AA seq
DB search
MSMFNLDRFRFDKKATTTTNKHEESGSKSPESEKENKPAQMKPVKGPPKSHARGVVFEEV
ITIDLEEDEPKTKLSLTRKSKDPVAKSSKTDHTDDEDNELEEKVNRLQEMFPQLKRKELL
EVITSTSTMEGAVAACLLQFGDQEDQSRKRKPDGSSSSQDSDLIQPSKKRRPSVNTNSDE
EEDDGEEPSWEKQEVMVRRLQKKFPDQDKEELRMVLQEHDWNVEDALQVLQMFSDPDNTS
FSSPESEEKKSSKSKSKDKSDGGHRKSKRHKDHGDSKINRDHKGSKHHTNVSESDGDSTD
ATRDSEDTDSDDSDRAKSKNSTSTLNTWLKKSSDSVSSSSFVKKTTTSSSQKPSSSSSSS
VAQTLSKFASGTSIAKKEAAERKRKARASDEHVSSEGENDDEEETVSDSEFEDSDEELDS
RGGMTEMKKEILTFFQEASIDELSLISGCSVKKAQKIVELRPYNEWQSLIDILIKNHGLS
EDLLLGCRVVLRERKVVLGLMSKCETISSKMIKKVTEVMKKGTGATKQPSVLNSQFQLKP
YQMIGLKWLLLLHDQNLSGILADEMGLGKTIQAIAFLAQLYEDGIDGPHLITVPSSTLDN
WVRELKLWCPSLKVLVYYGSVEDRSYLKRDILNKEVEFNVIVTTYNLAIGNDSDRSLFRK
LRLKYAVFDEGHMLKNMNSLRYRHLMAINAEHRLLLTGTPLQNNLLELMSLLNFIMPSMF
SNSATQLSKMFSMKSHEEQSRFERDRISQARLIMKPFILRRVKNEVLKQLPAKEEKTEFC
SMSEKQQVLYQKLLKKLKASTNGEKRELCNVMMQLRKMANHPLLHRQYFTTEKLKAMSKL
MLKEPTHFDADAALIQEDMEVMSDFELHRLCQQYSSIGSYQLETNLLLDSGKFHHLTELL
TSLKDKGDRVVLFSQFTMMLDIVEILLRHLKHRYVRLDGSTPIADRIVLIDEFNTDPDIF
VFLLSTRAGGLGINLTSANVVILHDIDCNPYNDKQAEDRCHRVGQTRTVQVIKLISKDSI
EECILQLGQKKLKLEQDMTTAEQGREGNIPEDMASLLRASLGM
NT seq
3192 nt
NT seq
+upstream
nt +downstream
nt
atgagcatgttcaatttagaccgttttcgtttcgataagaaagcaacgacgacaacgaac
aaacacgaggagagcgggtccaaaagtcccgagtctgagaaggagaataagccagctcag
atgaaaccagtcaaaggcccaccaaagtcccatgcccgaggagtggtttttgaagaagtc
attacaattgacttggaggaggatgagccaaaaaccaaattatcattaacaaggaaatcc
aaggaccctgttgcgaaatcatctaaaacagatcatacagatgatgaagacaatgagctg
gaggaaaaagtgaacagactacaagagatgtttcctcagttgaagaggaaagagctactg
gaggtcattacaagtacgagcacaatggagggggctgtagctgcatgcttgttgcagttt
ggtgatcaagaagaccaaagcagaaagagaaagccggatggatccagcagttctcaggac
agtgacctgattcaacccagcaaaaagagaagaccatcagtgaataccaattctgatgaa
gaagaggatgatggggaagaaccaagctgggagaagcaggaggtgatggtccgaagactg
cagaaaaagtttcctgaccaggacaaagaggagctgcggatggtgctgcaggaacacgac
tggaatgtcgaggatgctctgcaagttctacaaatgttctcagatccagataatactagc
ttcagctcacctgagtcagaagagaagaaatccagcaaatcaaagagcaaagacaagtca
gatgggggccacagaaagtcgaagcgccacaaagatcacggagacagtaaaatcaacaga
gatcataaaggctccaaacatcacacgaatgtcagtgaatcagatggggacagtacagat
gccacaagggacagtgaggacacagactcagatgacagcgacagggccaaaagcaaaaat
agcacgtccaccctgaatacatggcttaaaaaaagttctgattcagtgtcttcatcctcc
tttgtgaagaaaacaactacctcttcctcccagaagccgtcctcatcctcttcctcctct
gttgcccagacattgtccaaatttgccagcgggacaagtatagccaagaaggaggcagca
gagagaaagaggaaagcacgagcctcagatgaacatgtcagctctgagggggaaaatgat
gatgaggaggagacagttagtgacagtgaatttgaggattcggatgaagagctggactct
agaggtggcatgacagaaatgaagaaagagatcctcacattcttccaggaggcatcaata
gatgagctgtcactcatttctgggtgctctgttaaaaaagcacagaagattgtggaactg
agaccctataatgaatggcaaagcctgatcgatatcttgattaaaaaccatggactgtca
gaggatttattgctgggctgcagagttgtcctcagagagcgcaaggttgtcctggggctc
atgtcaaaatgtgagaccatttcttcgaaaatgatcaagaaggtcactgaggttatgaaa
aagggcacaggggccacgaaacaacccagtgtcctcaacagccaatttcagctgaaaccc
tatcaaatgattggcctaaagtggttgcttctcctgcatgatcagaacctgagtggtatc
ctggccgatgaaatgggtttgggaaaaacaatccaagctattgcgttcctggcccagttg
tacgaggatggaatagatggtcctcacctcatcactgtgccatcgtctacactggataac
tgggtcagagagctgaagctgtggtgtccaagcctcaaagttctagtttattatggctct
gtggaggaccgcagctacctcaaacgtgacatcttaaataaagaagttgagtttaacgtc
attgtgaccacgtataacttggccattggaaacgacagtgaccgcagccttttccgtaag
ctgcgtctgaagtatgctgtgtttgatgaaggtcacatgctgaagaacatgaactctctg
cgctaccgccaccttatggctattaacgcagagcatcgcttgttgctgacaggaactccc
ttacagaacaacctcttagaactgatgtctctcctgaacttcatcatgccttctatgttc
tccaactctgctacacagctctccaaaatgttttctatgaaatcccacgaggagcagagc
cgttttgagagggatcgtatttctcaggccagactcatcatgaagccttttatcctcaga
agagtcaagaacgaggtcctcaagcagctgcctgccaaggaagagaaaacagagttctgc
tcaatgagtgagaaacagcaggttctctaccagaagctccttaaaaaactcaaggcctcc
accaatggcgagaagcgtgaactgtgtaatgtgatgatgcagttgaggaagatggctaac
caccctctgcttcacagacagtatttcaccacagagaagctcaaagccatgagcaaactc
atgctcaaggagccaactcactttgatgcagacgctgctctgatccaggaggacatggaa
gtgatgtcagactttgagctgcatcgcctgtgccagcagtactcttccatcggctcctac
cagcttgaaaccaatcttctgctcgactccgggaagttccatcacctcacagagctgctg
acctcactcaaggacaagggagacagagtggttttattcagtcagttcaccatgatgctg
gacattgtggaaatactgctgagacatctcaagcatcgctatgttagactggatggatcc
acacccatagcagacaggatcgtgttgattgatgagttcaacacggaccctgacatattt
gtgttcctgttgtccacacgtgccggcggcctcggcattaacctcacttcagctaatgtt
gtgatcttacatgacattgactgcaacccctacaatgacaaacaggctgaggacagatgt
caccgtgtaggtcagaccaggactgtgcaggtcattaaactgataagtaaggacagcata
gaggagtgtatactacaacttggccagaagaaactcaaactggagcaggacatgaccacc
gctgaacagggtcgtgaggggaacatacctgaagatatggcatctttgctcagagcttca
ctgggaatgtga
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integrated database retrieval system
