Scomber japonicus (chub mackerel): 128364522
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Entry
128364522 CDS
T09718
Symbol
dtx1
Name
(RefSeq) E3 ubiquitin-protein ligase DTX1 isoform X1
KO
K06058
deltex [EC:
2.3.2.27
]
Organism
sjo
Scomber japonicus (chub mackerel)
Pathway
sjo04330
Notch signaling pathway
Brite
KEGG Orthology (KO) [BR:
sjo00001
]
09130 Environmental Information Processing
09132 Signal transduction
04330 Notch signaling pathway
128364522 (dtx1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
sjo04121
]
128364522 (dtx1)
Enzymes [BR:
sjo01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
128364522 (dtx1)
Ubiquitin system [BR:
sjo04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
128364522 (dtx1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DTC
WWE
WWE_5
zf-RING_UBOX
zf-rbx1
zf-C3HC4
zf-RING_2
zf-RING_Vps41
zf-ANAPC11
zf-UDP
zf_RING_Vps8
PHD_NSD
Motif
Other DBs
NCBI-GeneID:
128364522
NCBI-ProteinID:
XP_053181039
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All DBs
Position
9:complement(28528003..28569273)
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AA seq
642 aa
AA seq
DB search
MARPGSGLLVPVNGLGYPPQNLARVVVWEWLNEHGRWRPYTAAVCHHIENVLKGDARGTV
VLGQVDPQLSPYIIDLQSMHQFRQDTGTMRPVQRNFYEPSSAPGKGVVWEWENDNGSWTP
YDMEICVTIQNAYEKQHPWLDLTSLGFCYLIDFNSMSQTNRQSQRKRRLRRRMDLAYPLI
MGSIPKSQSWPVGASSGQPCSCQQCILVNSTRAASNAILASQRRKHYGGTAGNPGATGTL
TVVRQSNTFAGTSLWSPTSASSGTNNNNISMGGGQAKAEQVQLPLSTANFPCSPVMPSLS
SAHGHHALTINGQNNLNRPGTQRISVGTARGAIPPGVPALPVKNLTGSGPVHPALAGMTG
ILMCAAGLPVCLTRAPKPILHPPPINKSDMKPVPGINGMRRKTKKKHLRRGKNPEDVVRR
YTDKIKVVPDEDCTICMERLVMSSGYEGVLQHKGIKPELVGKLGKCGHMYHLLCLVAMYN
NGNKDGSLQCPTCKTIYGEKTGTQPPGKMEYHVIPHCLPGYSDSKTIRIVYDIPAGIQTN
EHPNPGKKFSARGFPRHCYLPDNEKGRKVLKLLIMAWDRRLIFTIGTSSTTGESDTVVWN
EIHHKTEFGSNLTGHGYPDPNYLDNVLTELSAQGVGEDNLKD
NT seq
1929 nt
NT seq
+upstream
nt +downstream
nt
atggctcgtccaggatctgggttgctggtgcctgtcaatgggctggggtacccccctcag
aacctggccagagtggtggtctgggagtggttgaacgaacatgggcgctggaggccctac
actgcagcggtttgccatcatattgagaatgtactgaagggggatgcccggggtaccgtg
gttctagggcaggtggatccccagctctctccttacatcattgacctgcagtccatgcat
cagtttcgacaggacacaggcaccatgagaccagtgcagaggaacttctatgagccgtca
tccgccccagggaaaggtgtggtgtgggagtgggagaatgacaacggttcgtggacaccg
tatgacatggaaatctgtgtgaccattcaaaacgcctacgagaagcagcacccctggttg
gacctgacctctctgggcttctgctacctcatcgacttcaacagcatgtctcagacaaac
aggcagagccagcgcaagcgacgcctgcgaagacgcatggaccttgcttaccctctcatc
atgggttccatccctaagtcgcagtcctggcctgtgggagccagctccggacagccctgc
tcctgccagcagtgcatcctggtcaacagtacgagagccgcctctaatgctattctggct
tctcagcgacgaaagcactacggaggcacagcaggcaacccgggtgccacaggaaccctg
acagtagtgcggcagagtaacacctttgctggaacctccctctggtctccgacatccgct
tcctccggcaccaacaacaataacataagtatgggcggcggacaagccaaagctgaacag
gtgcagttgccactgtccactgccaacttcccctgttcccccgtgatgccatctctttca
tccgcccatggccaccacgctctcaccatcaacggacagaacaacctgaatcgaccaggc
acgcagcgcatttcagtgggcactgccagaggagccatcccaccaggggttcctgcactc
ccagtaaagaacctgactggatctggaccagtgcacccagcactagcaggtatgacaggt
atcctgatgtgcgctgcaggtctaccggtttgcctgactcgggcccccaagcccatcctg
cacccgccacccatcaacaagagcgacatgaagccggtgccggggatcaacggcatgcga
cgcaaaactaagaaaaagcacctgaggagggggaaaaacccagaggatgtggtgcgaaga
tacacagacaagattaaagtggtgccagacgaggactgtaccatctgcatggagaggctg
gtcatgtcatcaggctatgaaggcgtcctgcagcacaaaggcatcaagccagagctggtg
ggcaaacttggcaagtgtgggcacatgtaccatctgctgtgcctggtggccatgtacaac
aatggcaataaggatggcagtcttcagtgcccaacatgcaagaccatctatggggagaaa
acaggcactcagcctcctgggaagatggagtaccacgtcatcccccactgcctgcccggc
tattcagactccaagaccatccgcatcgtctacgacattcctgccggcatccagaccaat
gagcaccccaaccccgggaagaagttcagtgcaagagggttccctcgacactgttacctc
cccgacaatgagaaaggcaggaaggtcctgaagttgctgatcatggcctgggaccgtcgc
ctcatcttcaccatcggcacgtccagcaccacaggcgagtcagacacagtggtgtggaac
gagattcaccacaagacagaatttggctccaacctgacaggccacggctacccagaccct
aactacttggacaacgtcctgacagagctgtcggcccagggggtcggcgaggacaacctg
aaggactga
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integrated database retrieval system
