Scomber japonicus (chub mackerel): 128364530
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Entry
128364530 CDS
T09718
Symbol
lrrc8ab
Name
(RefSeq) volume-regulated anion channel subunit LRRC8A
KO
K22038
volume-regulated anion channel
Organism
sjo
Scomber japonicus (chub mackerel)
Brite
KEGG Orthology (KO) [BR:
sjo00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
sjo04040
]
128364530 (lrrc8ab)
Ion channels [BR:
sjo04040
]
Chloride channels
Chloride channel, volume-regulated (VRAC)
128364530 (lrrc8ab)
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Gene cluster
GFIT
Motif
Pfam:
Pannexin_like
LRR_8
LRR_4
LRR_14
LRR_5
LRR_1
LRR_LRWD1
LRR_At5g56370
LRR_EndoS
Sp-CxC
LRR_6
Motif
Other DBs
NCBI-GeneID:
128364530
NCBI-ProteinID:
XP_053181051
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Position
9:12382822..12389001
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AA seq
795 aa
AA seq
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MIPITELRYFVDTQPAYRILKPWWDVFTDYISIVMLMISVFGGTLQVTQDKMICLPCKWV
VNQTCKKNFNSTLAASLFLEPKGIQYDLDRHQYNYVDAVCYENRLHWFAKYFPYLVLLHT
LIFLACSNFWFKFPRTSSKLEHFVSILLKCFDSPWTTRALSETVVEESDPKPMKMNGSMD
HKESVISEDVEASVPMLQRTKTRFEQGIVDRTETGVLDKKEGEQAKALFEKVKKFRIHVE
EGDIVYRLYIRQTIIKVIKFILIICYTGYYVHDIKFSVDCSVDIESLTGYSVYRCAHPLA
TLFKILACFYISLVVVYGLICMYTLCWMLRRSLKKYSFESIREESSYSDIPDVKNDFAFM
LHMIDQYDPLYSKRFAVFLSEVSENKLRQLNLNNEWTLDKLRQRITKNSQEKLELHLFML
SGIPDTVFDLMELEVLKLELIPDVTIPPIIAQLINLREMWLYHTPAKIEAPALAFLRENL
KSLHIKFTDIKEIPLWIYSLKNLSELHLTGNLSAENNRYIVIDGLRELKRLKVLRLKSNL
TKLPQVVTDVGMHLQKLSINNEGTKLMVLNSLKKMVNLTELELIRCDLERIPHSIFSLHN
LQEIDLKDNNLKTIEEIISFQHLHRLVCLKLWYNQIAYIPIQIGTLTNMEKLYLNRNKIE
KIPGQLFYCRKLRFLDLSHNNLTYIPTDIGFLQNLQYLAVTANRIESLPNELFQCKKLRT
LNLGNNCLQSLPSRFGELTGLTQLELRGNRLECLPVELGECRQLKRTGLVVEEDLFNTLP
TEVKEQLWKVDKEQT
NT seq
2388 nt
NT seq
+upstream
nt +downstream
nt
atgatccccatcactgaactgcggtactttgtggacacacagccagcataccgcatcctg
aaaccatggtgggatgtgttcaccgactacatctccattgttatgcttatgatttctgtg
tttggggggacactgcaggtcacccaggacaagatgatctgcctaccctgcaaatgggtg
gtcaatcagacctgcaagaagaacttcaattccaccctcgctgcatcgttgttcttggag
cccaaagggatccagtatgatctggaccgccaccagtacaactatgtggatgctgtgtgc
tatgagaacagattgcactggtttgccaagtatttcccctacctagtattactccacacc
cttattttcctggcttgcagcaacttttggttcaagttccctcggactagctcaaaacta
gagcactttgtatccattttgctgaaatgctttgattccccatggactactagggcactg
tcagagacagtagttgaagagagtgatccgaaaccgatgaaaatgaacggctcaatggac
cacaaagagtctgttatcagtgaggatgttgaagcaagtgttcctatgctccaacggaca
aagacgcgctttgagcagggcattgtagacagaacagaaacgggtgttttggacaagaaa
gagggtgaacaggcaaaagccctgtttgaaaaggtgaagaagttccgtattcatgtggaa
gagggagacattgtatacagactgtacatccgtcagactatcatcaaagttatcaaattt
attttgataatctgctacacagggtattacgtccacgatattaaattcagtgttgactgc
tctgtggatatagaaagtctgacaggttacagtgtgtatcgttgtgctcatccattagct
acactttttaaaatcttggcctgtttttacattagcttagtagtggtgtatggtttgatc
tgcatgtataccctttgctggatgcttcggcgctctctaaagaagtattcttttgagtca
atacgggaagagagcagctacagtgacatacctgatgttaagaatgactttgcattcatg
ttgcacatgatagatcagtatgaccctctgtactctaagcgctttgctgtgttcctctct
gaagtaagtgaaaataagctgaggcagctcaacctaaacaatgagtggacactggacaag
ctcaggcagaggataactaagaactctcaggagaagttggagttgcaccttttcatgctc
agtggcattccagacacagtatttgatctaatggagctagaggttcttaaactggagctc
atcccagacgtcaccatccccccgatcatcgctcagctgataaacctgcgagagatgtgg
ctctaccacactccagccaaaattgaagctccagcattggcttttttacgagagaattta
aagtctctgcacatcaagttcaccgacatcaaagagattcccttatggatctacagtctg
aagaatctcagtgagcttcatctcacggggaatctcagtgctgagaacaaccgttacatt
gtcatcgatgggctccgggagctcaagaggctcaaagttcttcgtctaaagagcaatctc
accaagctacctcaagtggtgactgatgtgggcatgcacctccagaagctgtccatcaat
aatgaaggcaccaagctgatggtgctcaatagtctaaagaagatggttaacttgaccgaa
ttagagctcattcgctgcgatctggaacgcataccgcactcaatcttcagcttgcacaac
ttgcaggagattgatctgaaggacaacaacctgaagaccattgaggagatcatcagcttc
cagcacctccaccggctggtctgccttaagctctggtacaaccagattgcctacattccc
atccagataggcacactgaccaacatggagaagctgtacctgaacagaaacaagattgag
aagattcccggccagttgttttattgccgcaagcttcgatttttggaccttagccataac
aacttaacctatatcccaacagacattggctttctccagaatcttcaatacctggcagtg
accgctaatagaatcgagagcctacctaatgagctgttccagtgcaagaaactccgcact
ttgaacttgggaaacaattgcctgcagtctctgccatcgcggtttggagagctgaccggg
ttgacacagctagagctgagaggaaaccgtctggagtgcttgccagtagagctaggcgag
tgccgacagttaaagagaaccggccttgtggtggaggaggacctcttcaacaccctgccc
accgaggttaaggaacagttgtggaaagttgacaaagagcagacttaa
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