Scomber japonicus (chub mackerel): 128364566
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Entry
128364566 CDS
T09718
Symbol
vps33a
Name
(RefSeq) vacuolar protein sorting-associated protein 33A
KO
K20182
vacuolar protein sorting-associated protein 33A
Organism
sjo
Scomber japonicus (chub mackerel)
Pathway
sjo04140
Autophagy - animal
sjo04148
Efferocytosis
sjo05132
Salmonella infection
Brite
KEGG Orthology (KO) [BR:
sjo00001
]
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
128364566 (vps33a)
04148 Efferocytosis
128364566 (vps33a)
09160 Human Diseases
09171 Infectious disease: bacterial
05132 Salmonella infection
128364566 (vps33a)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
sjo04131
]
128364566 (vps33a)
Membrane trafficking [BR:
sjo04131
]
Endosome - Lysosome transport
Tethering complex
CORVET complex
128364566 (vps33a)
Hops complex
128364566 (vps33a)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sec1
Motif
Other DBs
NCBI-GeneID:
128364566
NCBI-ProteinID:
XP_053181097
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Position
9:27902899..27908557
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AA seq
600 aa
AA seq
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MAAHLSYGRVNLNILREAARKELREFLDKCAGSKAIVWDEYLTGPFGLIAQYSLLKEHEV
EKMFTLKSGRLPPADVKNIIFFVRPRLELMDIIAENVFSEDKMHSSRDFHILFVPRRSML
CEQRLKEQGVLGSFINIDEYILDLIPYDGDLLSMEYESAFRECYLENDQTSLYHTAKGLM
TLQALYGTIPQIYGKGECARHVANMMLRMKREFAGSQNQILPVFDTLLLLDRNVDLLTPL
ATQLTYEGLIDEIYGINNGYVKLPPEKFAQKKQGEASKDLPTEAKKLQLNSAEELYAEIR
DKNFNAVGAALSKKAKIISAAFEERHNAKTVGEIKQFVSQLPHMQAARSSLANHTSIAEL
IKDITTSEAFFDNLTVEQEFMTGVDTDKVNTYIEDCIAQKDPLIKILRLVCMQSVCNNGL
KQKVFDYYKREILQTYGYEHILTLSNLEKAGLLKPQTGSRNNYPTIRKTLKLWMEDANEQ
NPNDISYVYSGYAPLSIRLTQVLARPGWRSIEEVLKMLPGPHFEERQQLPAGLHKKRQQG
ENRTTLVFFLGGVTYAEIAALRFLSQMEDSGMEYIIATTKLINGTTWIKSLMDRPEAQAP
NT seq
1803 nt
NT seq
+upstream
nt +downstream
nt
atggctgctcacctgtcgtacgggagagtaaatctaaacattttgagagaagcggcacga
aaagagctgcgagagtttttggacaaatgcgcgggaagcaaggccatagtttgggatgaa
tacctgacgggaccctttggactgatagcacagtactctttactgaaggaacatgaagtg
gaaaagatgtttactctcaagagtggccggctcccacctgctgatgtcaaaaatattatc
ttctttgttcgtcccagactggagcttatggatataatcgctgagaatgtattcagtgag
gataagatgcattcatcacgcgacttccacattctgtttgtgcctcggaggagtatgctg
tgtgaacagcggctgaaggagcagggcgtgctgggctctttcatcaacattgatgagtat
atcctggatttgattccctatgatggtgacctgctgtccatggagtatgaaagtgccttc
agggagtgctacttggaaaatgaccaaacaagcctttaccacacagccaaaggcctcatg
accttacaggcgctgtatggcaccattccacagatttatgggaaaggagaatgtgcacga
cacgttgccaacatgatgctgaggatgaagagggagtttgctggtagtcagaatcagatt
ctgccagtgtttgacaccctgctcctcctggaccgaaacgttgacctgctcacccctctg
gccacacagctcacctatgaaggtctcattgatgagatctatggaatcaataatggttat
gtcaaattgcctcctgagaagtttgcgcagaagaaacaaggtgaggcgagtaaagattta
cccacagaggccaagaagttacagctcaactcggcagaggaactgtatgcagaaatccgg
gacaagaatttcaatgcggttggagcagcactcagcaagaaggccaaaatcatttctgct
gcttttgaggaacgtcataatgccaaaacagtaggagaaataaagcagtttgtgtctcag
ttgccgcacatgcaggccgcacggagctcgctggccaatcacacgtctatagcagaactc
atcaaggacatcaccacatccgaggccttctttgataacctaacagtggagcaggagttt
atgactggagtcgacactgacaaggtgaacacttacattgaagactgcatcgcccaaaaa
gacccactgatcaagattttacgtttggtgtgcatgcagtctgtctgcaacaacggcctc
aagcagaaagtgtttgactactacaagagagagattctccagacctatggttacgaacac
atattaacactgagcaacctagagaaggcgggtcttttgaagccacagacaggctcgagg
aataactaccctaccataagaaaaacccttaaactgtggatggaggatgctaatgaacag
aaccccaatgacatctcgtatgtgtacagcggctacgctccactaagcatccgactgacc
caggtcctggccaggccgggctggcgtagcattgaagaggtgttgaagatgctcccgggt
ccacactttgaggagagacaacagctacctgctggactccacaagaaacgccagcaaggg
gagaatcggaccacgctggtgtttttcctgggaggagtgacatatgcagagatagccgct
cttcgtttcctctctcaaatggaagacagcgggatggagtacattatagccacaaccaaa
ctcataaacggtacaacttggatcaaatccctcatggacaggcctgaagctcaggcgccc
tga
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