Scomber japonicus (chub mackerel): 128364567
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Entry
128364567 CDS
T09718
Symbol
usp39
Name
(RefSeq) U4/U6.U5 tri-snRNP-associated protein 2
KO
K12847
U4/U6.U5 tri-snRNP-associated protein 2
Organism
sjo
Scomber japonicus (chub mackerel)
Pathway
sjo03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
sjo00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
128364567 (usp39)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
sjo03041
]
128364567 (usp39)
Spliceosome [BR:
sjo03041
]
Complex B
U4/U6.U5 tri-snRNP components
U4/U6.U5 tri-snRNP specific factors
128364567 (usp39)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
UCH
zf-UBP
UCH_1
zf-UBP_var
Motif
Other DBs
NCBI-GeneID:
128364567
NCBI-ProteinID:
XP_053181098
LinkDB
All DBs
Position
9:21419841..21425217
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AA seq
500 aa
AA seq
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MVSLKREREAEVDDEDNEDGVVTKIRRGRVVEDRRSRHCPYLDTINRSVLDFDFEKLCSI
SLSHINVYACLICGKYFQGRGLKSHAYTHSVQFTHHVFLNLHTLKFYCLPDNYEIIDSSL
EDITYVLKPTFTKQHITGLDKQGKLYRAYDGTTYLPGIVGLNNIKANDYANVVLQAFSNV
PPLRNYFLEEENYRGIRRPPGDIMFLLVQRFGELMRKLWNPRNFKAHVSPHEMLQAVVLC
SKKNFQITKQGDAVDFMTWFLNALHGALGGTKKKPSIITKAFQGSMRIFSKKLPHPDLLP
EEKEALLLTDEYQEQLSESTFLFLTLDLPTAPLYKDEKEQLIIPQVPLFNILGKFNGSTE
KEYKTYKENFLKRFQLTKLPPYLIFCIKRFTKNNFFVEKNPTIVNFPITNVDLREYLTEE
AQVTEKNTTYDLVANVVHDGKPTEGAYRIHVLHHGTGKWYEMQDLQVTDILPQMITLSEA
YIQIWKRQESDDDTNNHTGA
NT seq
1503 nt
NT seq
+upstream
nt +downstream
nt
atggtttctctcaagcgagaaagagaagctgaggtggacgatgaggacaacgaagacgga
gtagtgaccaaaatacgacgagggcgtgtagtagaagaccggagaagccgccactgccct
tatctcgacaccataaacaggagtgtgctggactttgattttgagaagctttgctccatc
tctctctcccacattaatgtctacgcctgccttatatgtgggaaatactttcaaggcaga
ggtctgaagtcccatgcttacactcatagtgtacagttcacccatcatgtgttcctcaat
ctgcacacactcaagttttactgtctaccagacaactacgagattatcgactcctcactg
gaggacatcacgtatgtgctgaagccaactttcaccaaacagcacatcaccggccttgac
aagcagggtaagctgtacagagcctacgacggtacgacctacctgccgggcattgtgggg
ctcaacaacatcaaagccaatgactacgccaatgtggtgttacaggctttttccaatgtt
ccaccattgcgaaactacttcctggaggaggaaaactacaggggaatccgcagaccacca
ggggacatcatgttcctcttggtacagaggtttggtgagctgatgcgcaaactttggaat
ccgagaaacttcaaggcccacgtgtctccccatgagatgctgcaggctgtggtgctttgt
agcaagaagaacttccaaattaccaagcaaggagatgctgtggacttcatgacgtggttc
ttaaatgctctgcatggtgctctaggaggcacaaagaaaaagccatcaatcattacaaaa
gcatttcaaggctccatgcggattttctcgaagaaactcccacacccagatttactacca
gaggagaaagaggcattgctcctgacagatgagtatcaggagcagctgtctgagtccact
ttcttgttcctgacccttgacctcccaacagctccactgtacaaggatgagaaggagcag
cttattattccacaagtccctctctttaacatcctgggaaagttcaacggcagtacagag
aaggaatacaaaacctacaaagaaaattttctgaaaaggttccagttgaccaaactgccg
ccgtacctcatcttttgcatcaaaagattcacaaagaataacttctttgtggaaaagaac
cccacaatcgtcaacttccccatcacgaatgtagacctccgtgaatacttgacagaggag
gcccaagttacagagaagaacacaacttatgaccttgtcgccaacgtggtgcatgatggg
aaacccactgagggagcgtacagaatacacgtcctacatcatggaactgggaagtggtat
gagatgcaggacctgcaggtgacagacattctcccccagatgattacactgtcagaggct
tacatccagatctggaagagacaggagagtgacgatgacacaaataaccacacgggggcg
taa
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