Scomber japonicus (chub mackerel): 128364596
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Entry
128364596 CDS
T09718
Name
(RefSeq) DNA repair protein XRCC4-like
KO
K10886
DNA-repair protein XRCC4
Organism
sjo
Scomber japonicus (chub mackerel)
Pathway
sjo03450
Non-homologous end-joining
Brite
KEGG Orthology (KO) [BR:
sjo00001
]
09120 Genetic Information Processing
09124 Replication and repair
03450 Non-homologous end-joining
128364596
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
sjo03400
]
128364596
DNA repair and recombination proteins [BR:
sjo03400
]
Eukaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
DNA Ligase 4 complex
128364596
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
XRCC4
XRCC4_CC
XLF
EURL
MctB
Leu_zip
DUF1299
UPF0242
MgpC
Motif
Other DBs
NCBI-GeneID:
128364596
NCBI-ProteinID:
XP_053181135
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Position
9:24128082..24149282
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AA seq
299 aa
AA seq
DB search
MSGTIRQITVTTDPETPYFLRVDWAVDLGAGFTLALTDGSSAWIGEVSEDEVTREANDMG
VTRERYVKDLLQALTGGEEERGGGRKGRRVGDTGVYSFQLTPDHCHLAYQKICNSVSVHL
GSAELQPAPDPLELNREMIGQSLKRSTDLETENCQLLEENRRLKQHHQQIHKELEQQVQD
KEVLESELYSRFVMVINEKKAKIRGLQDVVRQLQKTDDKQKGQCDNDTAQVEDGSQDRRE
ETIQSIHLSLEPTILITGRDLVCKGIPVDHTFSDDEDVQPRQKRQLLHSPSREPCEPSE
NT seq
900 nt
NT seq
+upstream
nt +downstream
nt
atgagtggtacaatccgacagatcactgtaaccactgacccggaaaccccatatttcctg
cgagtggactgggccgtagacctgggcgctgggttcacactagctctcactgatggcagc
tctgcatggattggagaagtttcagaagatgaggtgacgagggaagccaatgacatgggg
gttacaagagagagatatgtcaaggatcttcttcaagcactaacaggaggtgaagaggaa
agaggagggggaaggaaaggaaggagagtaggcgacacaggggtgtattctttccagctc
actccagaccactgtcatctcgcatatcagaagatctgcaatagtgtctcggtgcacttg
ggctctgcagaacttcagccagctccagaccctctagagttgaaccgggagatgattggc
cagtctctaaagcgcagcacagacctggagacagaaaactgccagctactagaggagaac
cgtagactaaaacagcaccaccagcaaatacacaaagagctggagcagcaggttcaggac
aaggaggtgttagagagcgagctatactctcgttttgtcatggtgataaacgaaaagaag
gccaagatcagaggcctgcaggatgttgtccgccagctccagaaaacagatgacaagcag
aagggacaatgtgacaacgacacagctcaagttgaagacggcagtcaggacagaagagag
gagacaattcagagcatccatctatcactggaaccaaccatcctcatcacaggtcgtgat
ctggtgtgcaagggcatccctgtggaccacactttttctgatgatgaggatgtacaacca
agacaaaagcgccagttgcttcactctccaagccgagaaccttgtgaaccttctgaataa
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