Scomber japonicus (chub mackerel): 128364627
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Entry
128364627 CDS
T09718
Symbol
mcoln1a
Name
(RefSeq) mucolipin-1a
KO
K04992
mucolipin 1
Organism
sjo
Scomber japonicus (chub mackerel)
Pathway
sjo04020
Calcium signaling pathway
sjo04142
Lysosome
Brite
KEGG Orthology (KO) [BR:
sjo00001
]
09130 Environmental Information Processing
09132 Signal transduction
04020 Calcium signaling pathway
128364627 (mcoln1a)
09140 Cellular Processes
09141 Transport and catabolism
04142 Lysosome
128364627 (mcoln1a)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
sjo04040
]
128364627 (mcoln1a)
Ion channels [BR:
sjo04040
]
Voltage-gated cation channels
Transient receptor potential channel (TRP)
128364627 (mcoln1a)
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Gene cluster
GFIT
Motif
Pfam:
MCLN_ECD
PKD_channel
Ion_trans
Motif
Other DBs
NCBI-GeneID:
128364627
NCBI-ProteinID:
XP_053181170
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Position
2:25492081..25508415
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AA seq
588 aa
AA seq
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MATTEQQDFSVRRGPSNSVTYYGSTDSSGEHDHHSHSHGNNHINHRLPTAMAGHWVAASP
EEEALRRKLKYFFMSPCDKYHAKGRKPYKLILQLLKIVIVTAQLVLFGLSNQVVVTFKEE
NTMTFKHLFLKDYDDSSDDFAVYTQQEVYDHIFYAVEQYLALPETTVGRYAYVYDVGVNG
SALSLCQQYYKKGRIDPANDTFSIDPRIITDCIGVDPLAKPPGPLTNNYKNFTLKFYKFI
NVTIEFQLKAINIQTIINNEIPDCYTFYITIVLDNKSHSGKVKIRLQNQASIKECKDPSV
SGHAENYARVAFDVAVALVCILSLLLCGRSILRGVTLQQEYVQFFRESLDRKVCWADRLE
FINGWFILLIISDMFTITGSIIKIGIESKNMSSYDLCGILLGTSTLLVWVGVIRYLTFFQ
KYNILIVTLRAAFPNVIRFCGCVAVIYLGYCFCGWIVLGPYHVKFRSLSMVSECLFSLIN
GDDMFVTFSEMQESSTLVWLFSQVYLYTFISLFIYMVLSLFIALITGAYEAIKQQTQEPI
HITDLHAFIAECTDAPSSGKFRGLETSPCSFFCCCDRTTTYEDVLLVN
NT seq
1767 nt
NT seq
+upstream
nt +downstream
nt
atggcgacgacagagcagcaggacttctcagtacgacgaggcccgtccaactcggtgact
tactacgggtccacagacagcagcggcgagcatgaccatcacagtcacagtcatggcaac
aaccatatcaaccatcggttacccacagcgatggcaggtcattgggttgcagccagtccg
gaagaagaggctcttcgcaggaagttaaaatactttttcatgagtccttgtgataaatat
cacgccaagggccgcaaaccttataaactgatcctacagctgctgaagatcgttattgtc
acagctcagttggtgctgtttggcctcagtaaccaggtggtggtgaccttcaaggaggag
aataccatgaccttcaagcacctcttcctcaaagactatgacgactcttcagatgacttt
gctgtttacacgcaacaggaagtctacgatcacatcttctatgcagtggagcagtattta
gccttaccagagaccacagtgggacgctacgcatacgtctatgatgttggtgtgaatggc
agcgcgctctctctctgccaacagtactacaagaagggacgtattgacccagctaacgac
accttcagtatagaccctcgcatcataacagactgtataggtgtggaccctctggcaaag
cctccaggtccactaacaaacaactacaagaactttacgctcaagttctacaagttcatt
aatgtcaccatagagtttcagctgaaggcgattaacatacagaccatcatcaacaatgag
atcccagactgctacactttttacataacaatagtgctggacaacaagtctcacagcggc
aaggtgaagatccgactacaaaaccaggcgtccataaaggagtgtaaagacccaagcgtc
tccggacatgctgagaattatgcccgtgtggcgtttgatgtcgctgtggctctggtgtgc
atattgtcactgctgctgtgtggacgctccatactgcgaggcgtcaccctgcaacaggag
tatgtgcagttcttcagggagagtctagatcgaaaagtgtgctgggcagatcgtctggag
ttcattaatggctggttcatcctcctcatcataagcgacatgttcactatcactggcagt
atcatcaaaatcggcattgagtctaagaatatgtcctcctatgacttatgtggcatcctc
ttggggacctccactctcttggtgtgggtgggagtcattcgctacctcactttcttccag
aagtacaatatcctgatcgtgacacttcgagcagcgtttcccaatgtgattcggttctgc
ggctgtgtggctgtcatctatctgggctactgcttctgtggctggatcgttctaggaccg
taccatgtgaagtttcgttctctgtccatggtatcggagtgcctcttctccctcattaat
ggggatgacatgttcgtgacgttctcagagatgcaggagagcagcactctggtgtggcta
ttcagccaagtttacttgtacaccttcatctccctcttcatctacatggtgctgtcgctc
tttatcgctctcatcactggagcctacgaggccatcaagcaacaaacccaggaacccata
cacatcacagacctgcacgccttcatagcagagtgtacagacgcaccgagctctgggaag
ttcagaggtttggagacctcaccgtgctccttcttctgctgctgtgacagaacaaccact
tacgaagatgtcctgttggtgaactga
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