Scomber japonicus (chub mackerel): 128364653
Help
Entry
128364653 CDS
T09718
Symbol
ube3b
Name
(RefSeq) ubiquitin-protein ligase E3B
KO
K10588
ubiquitin-protein ligase E3 B [EC:
2.3.2.26
]
Organism
sjo
Scomber japonicus (chub mackerel)
Pathway
sjo04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
sjo00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
128364653 (ube3b)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
sjo04121
]
128364653 (ube3b)
Enzymes [BR:
sjo01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.26 HECT-type E3 ubiquitin transferase
128364653 (ube3b)
Ubiquitin system [BR:
sjo04121
]
Ubiquitin ligases (E3)
HECT type E3
128364653 (ube3b)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HECT
IQ
DUF7462
Motif
Other DBs
NCBI-GeneID:
128364653
NCBI-ProteinID:
XP_053181199
LinkDB
All DBs
Position
9:complement(22403404..22411116)
Genome browser
AA seq
1068 aa
AA seq
DB search
MFSVTQSSKSEFLDKARQAREERRGQKEKERAAINIQALVRRFLCRCRLQKQIRKEVDDY
FQPSEPGTSKRNALSIFKIARKLLFIYCPEDKMRFEKLCRAILASMEVENEPKVWYVSLA
LSKDLTIPWLKQIKDVLWTCCQLLKNLKPDILQDNKLVTLYLTMLVTFTDTSTWRIVRGK
GEALRPALMRICENIMGHLNQKGFYSILQILLTNGLARSKPSLSKGTLTAIFTLSLRPVL
AAHFSDNLLRSFLIHIMSVPAVVSHLNVLTPECMASIQTHDLLRKFILFLSREEQCLDIC
VCLEGSHTLCLLGNLIQLGYLNEKVLEEEANHFVKDLTDMLSYCQRYVSQKKSNLTHWHP
VLGWFSQTVDYGLNESMPLVTKQLQYLWGVSIIRTLFSDVLSKKLESQEPTPSPPQPSTS
QNNLPVKNLFKRAFQKSASVRNILKPVGGKRVDSAEVQKVCSICVLYQSALSTLTQIRLQ
ILTGLTHLDDLLPKLWAFICELGPQGGLKLFMECLNNDTEESKQLLAMLMLFCDCSRHLI
TILDDIEVYEEQTSFKIEELLTISSFLNTFVFKMIWDGILENAKGEKLELFHSVHGWLMV
LYERDCRRKFTPDDHWLRKDLKPSLLFQELEKGKKRAQLLLQYIPHVIPHKNRVLLFRNI
VTKEKENLGLVETSSASPHVTHITIRRSRMLEDGYDQLRRLPVNSIKGVIRVKFVNDLGV
DEAGIDQDGVFKEFLEEIIKKVFNPALNLFRTTSGNERLYPSPTSYIHENHLQLFEFVGK
MLGKAIYEGIVVDVPFASFFLSQVLGHHHSTFYSSIDELPSLDSEFYKNLTSIKRYDGDV
GDLGLTLSYDEDVMGQLVCHELIPGGKTMPVTNENKISYIHLMAHFRMHTQIKEQTAAFI
RGFRSIINPEWLHMFSTPEVQRLVSGDNAEIDLDDLKKHTVYYGGFHSSHRVIIWLWDIL
SSDFNAEERAMFLKFVTSCSRPPLLGFAYLKPPFSIRCVEVSDDQDTGDTLGSVLRGFFT
IRKKEPGGRLPTSSTCFNLLKLPNYSKKSILRDKLRYAISMNTGFELS
NT seq
3207 nt
NT seq
+upstream
nt +downstream
nt
atgtttagtgtaactcaaagctccaagtcagagttcctggacaaagccaggcaggccagg
gaggagaggagggggcagaaggagaaggagagagcagcaatcaacatccaagccctggtc
aggagatttctctgtcgctgcagactccagaaacaaataaggaaagaggttgatgattat
tttcaaccctctgaacctgggacgtcaaaaagaaatgcactctcaattttcaaaattgct
cggaaattactgttcatctattgcccggaggataagatgaggtttgagaagctctgtcgg
gctattcttgccagcatggaggttgaaaatgaacccaaagtctggtacgtgtccttggct
ctctccaaagacctcaccattccctggctcaaacagatcaaagatgtgctgtggacctgc
tgtcagttactgaaaaatttaaagcctgacatccttcaagacaacaagttggtaacgctg
tacctcaccatgctggtgaccttcacagacacttcgacatggcggatagtcagagggaag
ggagaagctctcagacctgctttgatgaggatttgtgagaatatcatgggtcatctcaat
caaaagggattctattccatactgcagatcttgctgaccaatggcttggctcgttctaaa
ccgtctctctccaaaggcactctaacggctatcttcactttgtctttaaggccagtcctc
gctgctcacttctctgataacctgctaagatcattcctcattcacatcatgtcagtccca
gcagttgtatcccacctcaacgtgcttactccagagtgtatggcatcgattcagactcat
gacctgctccggaagtttattctgtttctcagtcgtgaggagcagtgtttagatatctgc
gtgtgtcttgagggaagccacacactgtgcttacttggcaacctgattcaattgggctac
cttaatgagaaagtcctagaagaggaggccaatcattttgtgaaggacctgactgacatg
ctgtcttattgccagagatatgtatcccaaaagaagtccaacctcacccactggcaccct
gtcctgggctggttctctcagactgtagactatggtctgaatgagtcaatgccgctggtc
actaaacaacttcagtacctgtggggtgtttccatcattcggacgctcttcagtgacgtc
ctctctaagaagctggagagtcaggagccgactccctcacccccacaacccagcacatcc
caaaacaatctaccagttaaaaacctcttcaagcgagcgtttcagaagtctgcttctgta
cgtaacatcttaaagccagttgggggaaagagagttgactcagctgaggttcagaaggtg
tgcagcatctgtgtgctttaccagagcgctctgtctacactgacacaaatacgactccag
atactgaccggtctgacacatctggatgacctcctgcctaagctgtgggcctttatctgt
gagctcggtcctcagggaggcctcaaacttttcatggagtgtctcaacaacgacaccgaa
gagtccaaacagctcctggctatgctcatgctcttctgtgactgttcacggcacctcatc
acaattctggatgacattgaagtgtatgaagagcagacgtctttcaaaatagaggagctc
ctcactatctcctcgttcctgaacacatttgtgttcaaaatgatatgggatggcatctta
gaaaatgcaaagggagagaaactggagttattccacagcgttcatggctggctgatggtg
ctttacgaacgggactgcaggcgaaaattcacccctgatgaccactggttacgcaaggac
ctgaagcccagcttgttgtttcaagaactggagaaaggcaagaaaagagcccagctatta
ctgcagtacatcccgcatgtcattccacataaaaacagggtgctgctgttcaggaacatt
gtcactaaggagaaagagaatctaggattggtagaaacgagctctgcctcgccacacgtc
acccatattaccatccgtcgctcacggatgttagaggatggatatgaccagctgcggcgc
ttaccagtgaattctataaaaggtgtcattcgtgtcaagtttgttaacgacctgggagtg
gacgaggccggtattgatcaggatggtgtctttaaagagtttttggaggagatcattaag
aaagtgttcaatcctgctctcaacctgttcaggactacaagtggaaatgaaaggctgtat
ccttcacctacatcctacatccatgagaaccatttgcagctttttgagtttgtggggaag
atgctcgggaaagctatatatgagggcattgttgtggacgttccttttgcctccttcttc
ctcagtcaagttttgggtcaccaccacagcactttctacagctccatagatgagctgccc
tcgctggactctgagttttacaaaaacctcacttccattaagcgatatgatggcgatgta
ggggatctaggactgacgttatcctatgatgaagatgttatggggcagctagtctgtcat
gagttgatacctggagggaagaccatgcctgtcactaatgaaaacaagatcagctacatc
cacctcatggctcacttccggatgcacacacagattaaagagcagactgcagctttcatc
cggggcttccgcagcatcatcaacccagagtggttgcacatgttttccacacctgaggtc
cagcgtcttgtctcaggagacaatgctgagattgacttagatgaccttaagaaacacaca
gtctactatggaggttttcacagcagccatcgtgtcataatctggctgtgggacatattg
tccagtgacttcaatgctgaggagagggctatgttccttaaatttgttaccagctgctca
aggcctcctcttctaggtttcgcctacctcaaaccacctttctccatccgttgtgtggaa
gtttcagatgatcaggacactggagacacccttggcagtgtcctcaggggctttttcact
atccgcaagaaggagcctggcggtcgacttcccacttcatctacgtgcttcaacctgctc
aagctgcccaactacagcaagaagagcatcttgcgtgacaagctgcgctatgctatcagt
atgaacacaggctttgagctctcctaa
DBGET
integrated database retrieval system
